RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 CCDC196A0A1B0GTZ2 297 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 SMAD7O15105 426 aaKnown RBP8.34□□□□□ -1.07
TRBV28-201ENST00000390400 AP5Z1O43299 807 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 FIBPO43427 364 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 CBFA2T2O43439 604 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 PFKFB2O60825 505 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 CILPO75339 1184 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 ERLIN1O75477 346 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 TADA3O75528 432 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 LARGE1O95461 756 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 GHRHP01286 108 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 PDHBP11177 359 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 BMP3P12645 472 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 RXRAP19793 462 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 GNAQP50148 359 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 GTF2A2P52657 109 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 ZNF543Q08ER8 600 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 ZNF252P-AS1Q0IIN9 211 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 STK3Q13188 491 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 RAB33AQ14088 237 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 PPP2R5BQ15173 497 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 ME3Q16798 604 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 TTC31Q49AM3 519 aaPredicted RBP8.34□□□□□ -1.07
TRBV28-201ENST00000390400 ANO6Q4KMQ2 910 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 ASPRV1Q53RT3 343 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 GPATCH4Q5T3I0 446 aaKnown RBP8.34□□□□□ -1.07
TRBV28-201ENST00000390400 GADL1Q6ZQY3 521 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 PRRT2Q7Z6L0 340 aaPredicted RBP8.34□□□□□ -1.07
TRBV28-201ENST00000390400 PDZD3Q86UT5 571 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 RASAL3Q86YV0 1011 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 CCDC144CPQ8IYA2 1237 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 C17orf53Q8N3J3 647 aaPredicted RBP8.34□□□□□ -1.07
TRBV28-201ENST00000390400 FANCBQ8NB91 859 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 SPC24Q8NBT2 197 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 TNFRSF25Q93038 417 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 C12orf42Q96LP6 360 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 MAP3K14Q99558 947 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 MED4Q9NPJ6 270 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 RBM28Q9NW13 759 aaKnown RBP8.34□□□□□ -1.07
TRBV28-201ENST00000390400 ZNF446Q9NWS9 450 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 RSPH14Q9UHP6 348 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 LOC285556D6RIA3 1793 aa8.34□□□□□ -1.07
TRBV28-201ENST00000390400 BECN2A8MW95 431 aa8.33□□□□□ -1.08
TRBV28-201ENST00000390400 SOX1O00570 391 aaPredicted RBP8.33□□□□□ -1.08
TRBV28-201ENST00000390400 CPLX1O14810 134 aa8.33□□□□□ -1.08
TRBV28-201ENST00000390400 IKBKBO14920 756 aa8.33□□□□□ -1.08
TRBV28-201ENST00000390400 WDR46O15213 610 aaKnown RBP8.33□□□□□ -1.08
TRBV28-201ENST00000390400 GOLGA8HP0CJ92 632 aa8.33□□□□□ -1.08
TRBV28-201ENST00000390400 SNHG28P0DPA3 235 aa8.33□□□□□ -1.08
TRBV28-201ENST00000390400 CETPP11597 493 aa8.33□□□□□ -1.08
TRBV28-201ENST00000390400 VCAM1P19320 739 aa8.33□□□□□ -1.08
TRBV28-201ENST00000390400 EPHA1P21709 976 aa8.33□□□□□ -1.08
TRBV28-201ENST00000390400 NME2P22392 152 aa8.33□□□□□ -1.08
TRBV28-201ENST00000390400 MCM3P25205 808 aa8.33□□□□□ -1.08
TRBV28-201ENST00000390400 GSCP56915 257 aaPredicted RBP8.33□□□□□ -1.08
TRBV28-201ENST00000390400 CCT2P78371 535 aaKnown RBP8.33□□□□□ -1.08
TRBV28-201ENST00000390400 IKQ13123 557 aaPredicted RBP8.33□□□□□ -1.08
TRBV28-201ENST00000390400 ARHGAP29Q52LW3 1261 aa8.33□□□□□ -1.08
TRBV28-201ENST00000390400 KIAA1755Q5JYT7 1200 aa8.33□□□□□ -1.08
TRBV28-201ENST00000390400 FAM83BQ5T0W9 1011 aa8.33□□□□□ -1.08
TRBV28-201ENST00000390400 CPLX2Q6PUV4 134 aaKnown RBP8.33□□□□□ -1.08
TRBV28-201ENST00000390400 FASTKD5Q7L8L6 764 aaKnown RBP8.33□□□□□ -1.08
TRBV28-201ENST00000390400 RASGRP2Q7LDG7 609 aa8.33□□□□□ -1.08
TRBV28-201ENST00000390400 SPATS2Q86XZ4 545 aaKnown RBP8.33□□□□□ -1.08
TRBV28-201ENST00000390400 SULF2Q8IWU5 870 aa8.33□□□□□ -1.08
TRBV28-201ENST00000390400 NECAB1Q8N987 351 aa8.33□□□□□ -1.08
TRBV28-201ENST00000390400 ERCC4Q92889 916 aaPredicted RBP8.33□□□□□ -1.08
TRBV28-201ENST00000390400 GTF3C6Q969F1 213 aa8.33□□□□□ -1.08
TRBV28-201ENST00000390400 NUP88Q99567 741 aaPredicted RBP8.33□□□□□ -1.08
TRBV28-201ENST00000390400 LZTS2Q9BRK4 669 aa8.33□□□□□ -1.08
TRBV28-201ENST00000390400 LLPHQ9BRT6 129 aaKnown RBP8.33□□□□□ -1.08
TRBV28-201ENST00000390400 NCOA5Q9HCD5 579 aaKnown RBP8.33□□□□□ -1.08
TRBV28-201ENST00000390400 PRKAG3Q9UGI9 489 aa8.33□□□□□ -1.08
TRBV28-201ENST00000390400 PHF24Q9UPV7 400 aa8.33□□□□□ -1.08
TRBV28-201ENST00000390400 POLR3KQ9Y2Y1 108 aaPredicted RBP8.33□□□□□ -1.08
TRBV28-201ENST00000390400 RRP15Q9Y3B9 282 aaKnown RBP8.33□□□□□ -1.08
TRBV28-201ENST00000390400 JRKLQ9Y4A0 524 aa8.33□□□□□ -1.08
TRBV28-201ENST00000390400 MYH6P13533 1939 aa8.33□□□□□ -1.08
TRBV28-201ENST00000390400 TCHHQ07283 1943 aa8.33□□□□□ -1.08
TRBV28-201ENST00000390400 CCL15-CCL14A0A0B4J2E2 113 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 ANKRD62A6NC57 917 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 MANSC4A6NHS7 340 aaPredicted RBP8.32□□□□□ -1.08
TRBV28-201ENST00000390400 RASSF10A6NK89 507 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 TMEM232C9JQI7 657 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 KLRF2D3W0D1 207 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 MAP2K7O14733 419 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 CDKL5O76039 1030 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 CLSTN1O94985 981 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 ECEL1O95672 775 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 BMP4P12644 408 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 SFPQP23246 707 aaKnown RBP eCLIP8.32□□□□□ -1.08
TRBV28-201ENST00000390400 ARNTP27540 789 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 GJB2P29033 226 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 GIPRP48546 466 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 STAT2P52630 851 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 CORO7P57737 925 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 SCRN1Q12765 414 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 GRM1Q13255 1194 aa8.32□□□□□ -1.08
TRBV28-201ENST00000390400 PABPC4Q13310 644 aaKnown RBP eCLIP8.32□□□□□ -1.08
TRBV28-201ENST00000390400 COL9A2Q14055 689 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms