RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 SERPIND1P05546 499 aa16.54■□□□□ 0.24
ALK-201ENST00000389048 ENO1P06733 434 aaKnown RBP16.54■□□□□ 0.24
ALK-201ENST00000389048 CCNE1P24864 410 aa16.54■□□□□ 0.24
ALK-201ENST00000389048 PTK2BQ14289 1009 aa16.54■□□□□ 0.24
ALK-201ENST00000389048 HIF1AQ16665 826 aa16.54■□□□□ 0.24
ALK-201ENST00000389048 MMS22LQ6ZRQ5 1243 aa16.54■□□□□ 0.24
ALK-201ENST00000389048 KIFC3Q9BVG8 833 aa16.54■□□□□ 0.24
ALK-201ENST00000389048 ZNF341Q9BYN7 854 aa16.54■□□□□ 0.24
ALK-201ENST00000389048 WDR11Q9BZH6 1224 aa16.54■□□□□ 0.24
ALK-201ENST00000389048 DDX47Q9H0S4 455 aaKnown RBP16.54■□□□□ 0.24
ALK-201ENST00000389048 SRPRBQ9Y5M8 271 aaKnown RBP16.54■□□□□ 0.24
ALK-201ENST00000389048 ATP9BO43861 1147 aa16.54■□□□□ 0.24
ALK-201ENST00000389048 FASTKD1Q53R41 847 aaKnown RBP16.54■□□□□ 0.24
ALK-201ENST00000389048 BABAM1Q9NWV8 329 aa16.54■□□□□ 0.24
ALK-201ENST00000389048 ATP8B1O43520 1251 aa16.54■□□□□ 0.24
ALK-201ENST00000389048 KRT37O76014 449 aa16.54■□□□□ 0.24
ALK-201ENST00000389048 CUL1Q13616 776 aa16.54■□□□□ 0.24
ALK-201ENST00000389048 UBE3CQ15386 1083 aa16.54■□□□□ 0.24
ALK-201ENST00000389048 FSCBQ5H9T9 825 aa16.54■□□□□ 0.24
ALK-201ENST00000389048 PANX2Q96RD6 677 aa16.54■□□□□ 0.24
ALK-201ENST00000389048 CDV3Q9UKY7 258 aaKnown RBP16.54■□□□□ 0.24
ALK-201ENST00000389048 PYGBP11216 843 aa16.54■□□□□ 0.24
ALK-201ENST00000389048 PSMC5P62195 406 aa16.54■□□□□ 0.24
ALK-201ENST00000389048 ARMCX2Q7L311 632 aa16.54■□□□□ 0.24
ALK-201ENST00000389048 SFR1Q86XK3 245 aa16.54■□□□□ 0.24
ALK-201ENST00000389048 SH3KBP1Q96B97 665 aa16.54■□□□□ 0.24
ALK-201ENST00000389048 PIH1D3Q9NQM4 214 aaKnown RBP16.54■□□□□ 0.24
ALK-201ENST00000389048 ABHD10Q9NUJ1 306 aa16.54■□□□□ 0.24
ALK-201ENST00000389048 CHCHD3Q9NX63 227 aaKnown RBP16.54■□□□□ 0.24
ALK-201ENST00000389048 PAPOLAP51003 745 aaKnown RBP16.53■□□□□ 0.24
ALK-201ENST00000389048 AP2B1P63010 937 aa16.53■□□□□ 0.24
ALK-201ENST00000389048 KDSRQ06136 332 aa16.53■□□□□ 0.24
ALK-201ENST00000389048 TERF2Q15554 542 aa16.53■□□□□ 0.24
ALK-201ENST00000389048 GPATCH4Q5T3I0 446 aaKnown RBP16.53■□□□□ 0.24
ALK-201ENST00000389048 YIPF2Q9BWQ6 316 aa16.53■□□□□ 0.24
ALK-201ENST00000389048 E9PMD0 336 aa16.53■□□□□ 0.24
ALK-201ENST00000389048 RESTQ13127 1097 aa16.53■□□□□ 0.24
ALK-201ENST00000389048 NCAPHQ15003 741 aa16.53■□□□□ 0.24
ALK-201ENST00000389048 ZBED2Q9BTP6 218 aa16.53■□□□□ 0.24
ALK-201ENST00000389048 SIK2Q9H0K1 926 aa16.53■□□□□ 0.24
ALK-201ENST00000389048 UNC45AQ9H3U1 944 aa16.53■□□□□ 0.24
ALK-201ENST00000389048 TRAPPC8Q9Y2L5 1435 aa16.53■□□□□ 0.24
ALK-201ENST00000389048 XDHP47989 1333 aa16.53■□□□□ 0.24
ALK-201ENST00000389048 ARHGEF10O15013 1369 aa16.53■□□□□ 0.24
ALK-201ENST00000389048 CCDC151A5D8V7 595 aa16.53■□□□□ 0.24
ALK-201ENST00000389048 CHGBP05060 677 aa16.53■□□□□ 0.24
ALK-201ENST00000389048 LCP1P13796 627 aa16.53■□□□□ 0.24
ALK-201ENST00000389048 EIF3BP55884 814 aaKnown RBP16.53■□□□□ 0.24
ALK-201ENST00000389048 DMC1Q14565 340 aa16.53■□□□□ 0.24
ALK-201ENST00000389048 NUP160Q12769 1436 aa16.53■□□□□ 0.24
ALK-201ENST00000389048 NEK2P51955 445 aa16.53■□□□□ 0.24
ALK-201ENST00000389048 GUCY1A3Q02108 690 aa16.53■□□□□ 0.24
ALK-201ENST00000389048 KIAA1755Q5JYT7 1200 aa16.53■□□□□ 0.24
ALK-201ENST00000389048 PARP9Q8IXQ6 854 aa16.53■□□□□ 0.24
ALK-201ENST00000389048 LRRC37BQ96QE4 947 aa16.53■□□□□ 0.24
ALK-201ENST00000389048 RAVER2Q9HCJ3 691 aaKnown RBP16.53■□□□□ 0.24
ALK-201ENST00000389048 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.53■□□□□ 0.24
ALK-201ENST00000389048 ADAM21Q9UKJ8 722 aa16.53■□□□□ 0.24
ALK-201ENST00000389048 USP17L5A8MUK1 530 aa16.52■□□□□ 0.24
ALK-201ENST00000389048 ERVV-2B6SEH9 535 aa16.52■□□□□ 0.24
ALK-201ENST00000389048 ZNF699Q32M78 642 aa16.52■□□□□ 0.24
ALK-201ENST00000389048 ANKRD40Q6AI12 368 aa16.52■□□□□ 0.24
ALK-201ENST00000389048 VPS39Q96JC1 886 aa16.52■□□□□ 0.24
ALK-201ENST00000389048 ETNK1Q9HBU6 452 aa16.52■□□□□ 0.24
ALK-201ENST00000389048 V9GYQ6 96 aa16.52■□□□□ 0.24
ALK-201ENST00000389048 UBE4BO95155 1302 aa16.52■□□□□ 0.24
ALK-201ENST00000389048 MRPS15P82914 257 aaKnown RBP16.52■□□□□ 0.24
ALK-201ENST00000389048 TSPY1Q01534 308 aa16.52■□□□□ 0.24
ALK-201ENST00000389048 CATSPER4Q7RTX7 472 aa16.52■□□□□ 0.24
ALK-201ENST00000389048 TMC4Q7Z404 712 aa16.52■□□□□ 0.24
ALK-201ENST00000389048 SLC17A8Q8NDX2 589 aa16.52■□□□□ 0.24
ALK-201ENST00000389048 CYFIP1Q7L576 1253 aa16.52■□□□□ 0.24
ALK-201ENST00000389048 NLRP14Q86W24 1093 aa16.52■□□□□ 0.24
ALK-201ENST00000389048 TTC8Q8TAM2 541 aa16.52■□□□□ 0.24
ALK-201ENST00000389048 SH3RF3Q8TEJ3 882 aaPredicted RBP16.52■□□□□ 0.24
ALK-201ENST00000389048 ZNF185O15231 689 aa16.52■□□□□ 0.23
ALK-201ENST00000389048 SERPINI2O75830 405 aa16.52■□□□□ 0.23
ALK-201ENST00000389048 RPS6P62753 249 aaKnown RBP16.52■□□□□ 0.23
ALK-201ENST00000389048 TBL3Q12788 808 aaKnown RBP16.52■□□□□ 0.23
ALK-201ENST00000389048 THEMIS2Q5TEJ8 643 aa16.52■□□□□ 0.23
ALK-201ENST00000389048 LMBRD2Q68DH5 695 aaPredicted RBP16.52■□□□□ 0.23
ALK-201ENST00000389048 OXER1Q8TDS5 423 aa16.52■□□□□ 0.23
ALK-201ENST00000389048 MS4A14Q96JA4 679 aa16.52■□□□□ 0.23
ALK-201ENST00000389048 TCN1P20061 433 aaPredicted RBP16.52■□□□□ 0.23
ALK-201ENST00000389048 ARFIP2P53365 341 aa16.52■□□□□ 0.23
ALK-201ENST00000389048 TRIM60Q495X7 471 aa16.52■□□□□ 0.23
ALK-201ENST00000389048 SYNDIG1Q9H7V2 258 aa16.52■□□□□ 0.23
ALK-201ENST00000389048 TRAF3IP3Q9Y228 551 aa16.52■□□□□ 0.23
ALK-201ENST00000389048 MEFVO15553 781 aaPredicted RBP16.51■□□□□ 0.23
ALK-201ENST00000389048 KCNA2P16389 499 aa16.51■□□□□ 0.23
ALK-201ENST00000389048 ZNF564Q8TBZ8 553 aaPredicted RBP16.51■□□□□ 0.23
ALK-201ENST00000389048 PBXIP1Q96AQ6 731 aa16.51■□□□□ 0.23
ALK-201ENST00000389048 CFAP65Q6ZU64 1925 aaKnown RBP16.51■□□□□ 0.23
ALK-201ENST00000389048 MTM1Q13496 603 aa16.51■□□□□ 0.23
ALK-201ENST00000389048 RHPN2Q8IUC4 686 aa16.51■□□□□ 0.23
ALK-201ENST00000389048 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.51■□□□□ 0.23
ALK-201ENST00000389048 ASCC2Q9H1I8 757 aaPredicted RBP16.51■□□□□ 0.23
ALK-201ENST00000389048 ADD3Q9UEY8 706 aaKnown RBP16.51■□□□□ 0.23
ALK-201ENST00000389048 ABT1Q9ULW3 272 aaKnown RBP16.51■□□□□ 0.23
ALK-201ENST00000389048 NPHP3-ACAD11A0A0J9YXS1 232 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms