RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 USP11P51784 963 aa20.33■□□□□ 0.84
CSPG5-202ENST00000383738 HVCN1Q96D96 273 aa20.33■□□□□ 0.84
CSPG5-202ENST00000383738 ADPGKQ9BRR6 497 aa20.33■□□□□ 0.84
CSPG5-202ENST00000383738 MAGEF1Q9HAY2 307 aa20.33■□□□□ 0.84
CSPG5-202ENST00000383738 ASTN2O75129 1339 aaPredicted RBP20.32■□□□□ 0.84
CSPG5-202ENST00000383738 AFPP02771 609 aaKnown RBP20.32■□□□□ 0.84
CSPG5-202ENST00000383738 SPATS2Q86XZ4 545 aaKnown RBP20.32■□□□□ 0.84
CSPG5-202ENST00000383738 ACCSQ96QU6 501 aa20.32■□□□□ 0.84
CSPG5-202ENST00000383738 METTL14Q9HCE5 456 aaKnown RBP20.32■□□□□ 0.84
CSPG5-202ENST00000383738 PARP2Q9UGN5 583 aa20.32■□□□□ 0.84
CSPG5-202ENST00000383738 GMNCA6NCL1 334 aa20.32■□□□□ 0.84
CSPG5-202ENST00000383738 IQCA1LA6NCM1 817 aa20.32■□□□□ 0.84
CSPG5-202ENST00000383738 RHPN2Q8IUC4 686 aa20.32■□□□□ 0.84
CSPG5-202ENST00000383738 PARP9Q8IXQ6 854 aa20.32■□□□□ 0.84
CSPG5-202ENST00000383738 LMNTD2Q8IXW0 634 aa20.32■□□□□ 0.84
CSPG5-202ENST00000383738 ARP10275 920 aa20.32■□□□□ 0.84
CSPG5-202ENST00000383738 CYP2B6P20813 491 aa20.32■□□□□ 0.84
CSPG5-202ENST00000383738 ZNF157P51786 506 aaPredicted RBP20.32■□□□□ 0.84
CSPG5-202ENST00000383738 TMEM62Q0P6H9 643 aa20.32■□□□□ 0.84
CSPG5-202ENST00000383738 C7orf31Q8N865 590 aa20.32■□□□□ 0.84
CSPG5-202ENST00000383738 KIFC3Q9BVG8 833 aa20.32■□□□□ 0.84
CSPG5-202ENST00000383738 AP5M1Q9H0R1 490 aa20.32■□□□□ 0.84
CSPG5-202ENST00000383738 RGPD2P0DJD1 1756 aa20.32■□□□□ 0.84
CSPG5-202ENST00000383738 VIRMAQ69YN4 1812 aaKnown RBP20.32■□□□□ 0.84
CSPG5-202ENST00000383738 GGPS1O95749 300 aa20.31■□□□□ 0.84
CSPG5-202ENST00000383738 FAM213AQ9BRX8 229 aa20.31■□□□□ 0.84
CSPG5-202ENST00000383738 GEMIN8Q9NWZ8 242 aaKnown RBP20.31■□□□□ 0.84
CSPG5-202ENST00000383738 PEX10O60683 326 aa20.31■□□□□ 0.84
CSPG5-202ENST00000383738 PIK3CAP42336 1068 aa20.31■□□□□ 0.84
CSPG5-202ENST00000383738 POLE2P56282 527 aa20.31■□□□□ 0.84
CSPG5-202ENST00000383738 DNAAF5Q86Y56 855 aa20.31■□□□□ 0.84
CSPG5-202ENST00000383738 PLVAPQ9BX97 442 aa20.31■□□□□ 0.84
CSPG5-202ENST00000383738 TRIM7Q9C029 511 aa20.31■□□□□ 0.84
CSPG5-202ENST00000383738 KCNH7Q9NS40 1196 aa20.31■□□□□ 0.84
CSPG5-202ENST00000383738 RSPH10B2B2RC85 870 aa20.31■□□□□ 0.84
CSPG5-202ENST00000383738 P4HBP07237 508 aaKnown RBP20.31■□□□□ 0.84
CSPG5-202ENST00000383738 RSPH10BP0C881 870 aa20.31■□□□□ 0.84
CSPG5-202ENST00000383738 MYBL2P10244 700 aa20.31■□□□□ 0.84
CSPG5-202ENST00000383738 MXI1P50539 228 aa20.31■□□□□ 0.84
CSPG5-202ENST00000383738 TXNP10599 105 aaKnown RBP20.31■□□□□ 0.84
CSPG5-202ENST00000383738 MSANTD4Q8NCY6 345 aa20.31■□□□□ 0.84
CSPG5-202ENST00000383738 SPATA33Q96N06 139 aa20.31■□□□□ 0.84
CSPG5-202ENST00000383738 MMP19Q99542 508 aa20.31■□□□□ 0.84
CSPG5-202ENST00000383738 DNAI2Q9GZS0 605 aa20.31■□□□□ 0.84
CSPG5-202ENST00000383738 SNX12Q9UMY4 172 aa20.31■□□□□ 0.84
CSPG5-202ENST00000383738 TACC3Q9Y6A5 838 aa20.31■□□□□ 0.84
CSPG5-202ENST00000383738 NR3C1P04150 777 aa20.3■□□□□ 0.84
CSPG5-202ENST00000383738 VCAM1P19320 739 aa20.3■□□□□ 0.84
CSPG5-202ENST00000383738 MDM1Q8TC05 714 aa20.3■□□□□ 0.84
CSPG5-202ENST00000383738 MYO9BQ13459 2157 aa20.3■□□□□ 0.84
CSPG5-202ENST00000383738 YDJCA8MPS7 323 aa20.3■□□□□ 0.84
CSPG5-202ENST00000383738 MAP2K7O14733 419 aa20.3■□□□□ 0.84
CSPG5-202ENST00000383738 ZNF449Q6P9G9 518 aa20.3■□□□□ 0.84
CSPG5-202ENST00000383738 RETREG2Q8NC44 543 aa20.3■□□□□ 0.84
CSPG5-202ENST00000383738 PPP1R13LQ8WUF5 828 aa20.3■□□□□ 0.84
CSPG5-202ENST00000383738 MAP3K14Q99558 947 aa20.3■□□□□ 0.84
CSPG5-202ENST00000383738 REEP2Q9BRK0 252 aa20.3■□□□□ 0.84
CSPG5-202ENST00000383738 TSKSQ9UJT2 592 aa20.3■□□□□ 0.84
CSPG5-202ENST00000383738 AMFRQ9UKV5 643 aa20.3■□□□□ 0.84
CSPG5-202ENST00000383738 PNMA3Q9UL41 463 aa20.3■□□□□ 0.84
CSPG5-202ENST00000383738 SNX24Q9Y343 169 aa20.3■□□□□ 0.84
CSPG5-202ENST00000383738 MTMR3Q13615 1198 aa20.3■□□□□ 0.84
CSPG5-202ENST00000383738 MESDQ14696 234 aa20.3■□□□□ 0.84
CSPG5-202ENST00000383738 KIF22Q14807 665 aa20.3■□□□□ 0.84
CSPG5-202ENST00000383738 MUM1Q2TAK8 710 aa20.3■□□□□ 0.84
CSPG5-202ENST00000383738 NUGGCQ68CJ6 796 aa20.3■□□□□ 0.84
CSPG5-202ENST00000383738 LPAR1Q92633 364 aa20.3■□□□□ 0.84
CSPG5-202ENST00000383738 CCDC77Q9BR77 488 aa20.3■□□□□ 0.84
CSPG5-202ENST00000383738 STMN4Q9H169 189 aaPredicted RBP20.3■□□□□ 0.84
CSPG5-202ENST00000383738 ROBO1Q9Y6N7 1651 aa20.29■□□□□ 0.84
CSPG5-202ENST00000383738 TMEM150BA6NC51 233 aa20.29■□□□□ 0.84
CSPG5-202ENST00000383738 WNT7AO00755 349 aa20.29■□□□□ 0.84
CSPG5-202ENST00000383738 H2AFZP0C0S5 128 aa20.29■□□□□ 0.84
CSPG5-202ENST00000383738 GAP43P17677 238 aa20.29■□□□□ 0.84
CSPG5-202ENST00000383738 KCNH2Q12809 1159 aa20.29■□□□□ 0.84
CSPG5-202ENST00000383738 TAF11Q15544 211 aa20.29■□□□□ 0.84
CSPG5-202ENST00000383738 TAF1CQ15572 869 aaPredicted RBP20.29■□□□□ 0.84
CSPG5-202ENST00000383738 H2AFVQ71UI9 128 aa20.29■□□□□ 0.84
CSPG5-202ENST00000383738 NUDT12Q9BQG2 462 aa20.29■□□□□ 0.84
CSPG5-202ENST00000383738 ADAM33Q9BZ11 813 aa20.29■□□□□ 0.84
CSPG5-202ENST00000383738 LIMA1Q9UHB6 759 aaKnown RBP20.29■□□□□ 0.84
CSPG5-202ENST00000383738 AMACRQ9UHK6 382 aa20.29■□□□□ 0.84
CSPG5-202ENST00000383738 CAPN6Q9Y6Q1 641 aa20.29■□□□□ 0.84
CSPG5-202ENST00000383738 KRT15P19012 456 aa20.29■□□□□ 0.84
CSPG5-202ENST00000383738 SCYL2Q6P3W7 929 aa20.29■□□□□ 0.84
CSPG5-202ENST00000383738 FAM47EQ6ZV65 393 aa20.29■□□□□ 0.84
CSPG5-202ENST00000383738 GPRC5CQ9NQ84 441 aa20.29■□□□□ 0.84
CSPG5-202ENST00000383738 INTUQ9ULD6 942 aa20.29■□□□□ 0.84
CSPG5-202ENST00000383738 AGTPBP1Q9UPW5 1226 aa20.29■□□□□ 0.84
CSPG5-202ENST00000383738 CCL15-CCL14A0A0B4J2E2 113 aa20.29■□□□□ 0.84
CSPG5-202ENST00000383738 MMEP08473 750 aa20.29■□□□□ 0.84
CSPG5-202ENST00000383738 SLC20A2Q08357 652 aa20.29■□□□□ 0.84
CSPG5-202ENST00000383738 CCL15Q16663 113 aa20.29■□□□□ 0.84
CSPG5-202ENST00000383738 ZNF746Q6NUN9 644 aaPredicted RBP20.29■□□□□ 0.84
CSPG5-202ENST00000383738 RNF10Q8N5U6 811 aaKnown RBP20.29■□□□□ 0.84
CSPG5-202ENST00000383738 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.29■□□□□ 0.84
CSPG5-202ENST00000383738 CCSER1Q9C0I3 900 aa20.29■□□□□ 0.84
CSPG5-202ENST00000383738 TBC1D22BQ9NU19 505 aa20.29■□□□□ 0.84
CSPG5-202ENST00000383738 PNMA2Q9UL42 364 aa20.29■□□□□ 0.84
CSPG5-202ENST00000383738 PCDHA10Q9Y5I2 948 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms