RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 CCDC43Q96MW1 224 aaKnown RBP10.32□□□□□ -0.76
HMGN1-202ENST00000380747 NECAB3Q96P71 396 aaPredicted RBP10.32□□□□□ -0.76
HMGN1-202ENST00000380747 ZBED2Q9BTP6 218 aa10.32□□□□□ -0.76
HMGN1-202ENST00000380747 CYP26B1Q9NR63 512 aa10.32□□□□□ -0.76
HMGN1-202ENST00000380747 AKT3Q9Y243 479 aa10.32□□□□□ -0.76
HMGN1-202ENST00000380747 HCN4Q9Y3Q4 1203 aa10.32□□□□□ -0.76
HMGN1-202ENST00000380747 SCN5AQ14524 2016 aa10.32□□□□□ -0.76
HMGN1-202ENST00000380747 TRIP12Q14669 1992 aaPredicted RBP10.32□□□□□ -0.76
HMGN1-202ENST00000380747 A0A087WWV3 80 aa10.31□□□□□ -0.76
HMGN1-202ENST00000380747 SMAPO00193 183 aa10.31□□□□□ -0.76
HMGN1-202ENST00000380747 LAD1O00515 517 aa10.31□□□□□ -0.76
HMGN1-202ENST00000380747 ARHGAP33O14559 1287 aa10.31□□□□□ -0.76
HMGN1-202ENST00000380747 ZBTB39O15060 712 aa10.31□□□□□ -0.76
HMGN1-202ENST00000380747 POLGP54098 1239 aaPredicted RBP10.31□□□□□ -0.76
HMGN1-202ENST00000380747 WDR5P61964 334 aaKnown RBP10.31□□□□□ -0.76
HMGN1-202ENST00000380747 TFF2Q03403 129 aa10.31□□□□□ -0.76
HMGN1-202ENST00000380747 KIZQ2M2Z5 673 aa10.31□□□□□ -0.76
HMGN1-202ENST00000380747 XKR9Q5GH70 373 aa10.31□□□□□ -0.76
HMGN1-202ENST00000380747 DTHD1Q6ZMT9 781 aa10.31□□□□□ -0.76
HMGN1-202ENST00000380747 TSHZ1Q6ZSZ6 1077 aa10.31□□□□□ -0.76
HMGN1-202ENST00000380747 ZNF668Q96K58 619 aaPredicted RBP10.31□□□□□ -0.76
HMGN1-202ENST00000380747 SCLT1Q96NL6 688 aa10.31□□□□□ -0.76
HMGN1-202ENST00000380747 SLC9A7Q96T83 725 aa10.31□□□□□ -0.76
HMGN1-202ENST00000380747 HSD17B14Q9BPX1 270 aa10.31□□□□□ -0.76
HMGN1-202ENST00000380747 JPH2Q9BR39 696 aaPredicted RBP10.31□□□□□ -0.76
HMGN1-202ENST00000380747 LRFN3Q9BTN0 628 aa10.31□□□□□ -0.76
HMGN1-202ENST00000380747 IFIH1Q9BYX4 1025 aaKnown RBP10.31□□□□□ -0.76
HMGN1-202ENST00000380747 RAB34Q9BZG1 259 aa10.31□□□□□ -0.76
HMGN1-202ENST00000380747 TUFT1Q9NNX1 390 aa10.31□□□□□ -0.76
HMGN1-202ENST00000380747 LRWD1Q9UFC0 647 aa10.31□□□□□ -0.76
HMGN1-202ENST00000380747 MTCH2Q9Y6C9 303 aa10.31□□□□□ -0.76
HMGN1-202ENST00000380747 STX6O43752 255 aa10.3□□□□□ -0.76
HMGN1-202ENST00000380747 EFCAB14O75071 495 aa10.3□□□□□ -0.76
HMGN1-202ENST00000380747 MED24O75448 989 aa10.3□□□□□ -0.76
HMGN1-202ENST00000380747 LYPLA2O95372 231 aa10.3□□□□□ -0.76
HMGN1-202ENST00000380747 AMHP03971 560 aa10.3□□□□□ -0.76
HMGN1-202ENST00000380747 SPATA31C1P0DKV0 1188 aa10.3□□□□□ -0.76
HMGN1-202ENST00000380747 CD52P31358 61 aa10.3□□□□□ -0.76
HMGN1-202ENST00000380747 CCT6AP40227 531 aaKnown RBP10.3□□□□□ -0.76
HMGN1-202ENST00000380747 RFC5P40937 340 aa10.3□□□□□ -0.76
HMGN1-202ENST00000380747 PRPHP41219 470 aa10.3□□□□□ -0.76
HMGN1-202ENST00000380747 DNM2P50570 870 aa10.3□□□□□ -0.76
HMGN1-202ENST00000380747 KCNQ1P51787 676 aa10.3□□□□□ -0.76
HMGN1-202ENST00000380747 RABGGTBP53611 331 aa10.3□□□□□ -0.76
HMGN1-202ENST00000380747 CRYBB1P53674 252 aaPredicted RBP10.3□□□□□ -0.76
HMGN1-202ENST00000380747 NLRP11P59045 1033 aaKnown RBP10.3□□□□□ -0.76
HMGN1-202ENST00000380747 DEFB103AP81534 67 aa10.3□□□□□ -0.76
HMGN1-202ENST00000380747 ATP2C1P98194 919 aaPredicted RBP10.3□□□□□ -0.76
HMGN1-202ENST00000380747 NFX1Q12986 1120 aaKnown RBP10.3□□□□□ -0.76
HMGN1-202ENST00000380747 RESTQ13127 1097 aa10.3□□□□□ -0.76
HMGN1-202ENST00000380747 PAK2Q13177 524 aa10.3□□□□□ -0.76
HMGN1-202ENST00000380747 DRP2Q13474 957 aa10.3□□□□□ -0.76
HMGN1-202ENST00000380747 TMEM31Q5JXX7 168 aa10.3□□□□□ -0.76
HMGN1-202ENST00000380747 HAUS3Q68CZ6 603 aa10.3□□□□□ -0.76
HMGN1-202ENST00000380747 FAM117BQ6P1L5 589 aa10.3□□□□□ -0.76
HMGN1-202ENST00000380747 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.3□□□□□ -0.761e-8■■■□□ 16.2
HMGN1-202ENST00000380747 TMCO2Q7Z6W1 182 aaPredicted RBP10.3□□□□□ -0.76
HMGN1-202ENST00000380747 CATSPER3Q86XQ3 398 aa10.3□□□□□ -0.76
HMGN1-202ENST00000380747 HERC6Q8IVU3 1022 aa10.3□□□□□ -0.76
HMGN1-202ENST00000380747 LINC01465Q8N7H1 131 aa10.3□□□□□ -0.76
HMGN1-202ENST00000380747 PIGOQ8TEQ8 1089 aa10.3□□□□□ -0.76
HMGN1-202ENST00000380747 SLC7A3Q8WY07 619 aa10.3□□□□□ -0.76
HMGN1-202ENST00000380747 APBB2Q92870 758 aa10.3□□□□□ -0.76
HMGN1-202ENST00000380747 CEP89Q96ST8 783 aa10.3□□□□□ -0.76
HMGN1-202ENST00000380747 OSMRQ99650 979 aa10.3□□□□□ -0.76
HMGN1-202ENST00000380747 AGO3Q9H9G7 860 aaKnown RBP10.3□□□□□ -0.76
HMGN1-202ENST00000380747 KIAA1468Q9P260 1216 aa10.3□□□□□ -0.76
HMGN1-202ENST00000380747 SUCLA2Q9P2R7 463 aaPredicted RBP10.3□□□□□ -0.76
HMGN1-202ENST00000380747 MTMR6Q9Y217 621 aa10.3□□□□□ -0.76
HMGN1-202ENST00000380747 NOC2LQ9Y3T9 749 aaKnown RBP10.3□□□□□ -0.76
HMGN1-202ENST00000380747 BRWD1Q9NSI6 2320 aa10.3□□□□□ -0.76
HMGN1-202ENST00000380747 WDFY4Q6ZS81 3184 aa10.3□□□□□ -0.76
HMGN1-202ENST00000380747 KDM3AQ9Y4C1 1321 aa10.3□□□□□ -0.76
HMGN1-202ENST00000380747 VWA3AA6NCI4 1184 aa10.29□□□□□ -0.76
HMGN1-202ENST00000380747 PP2D1A8MPX8 630 aa10.29□□□□□ -0.76
HMGN1-202ENST00000380747 TLL1O43897 1013 aa10.29□□□□□ -0.76
HMGN1-202ENST00000380747 GPR37L1O60883 481 aa10.29□□□□□ -0.76
HMGN1-202ENST00000380747 GPR32O75388 356 aa10.29□□□□□ -0.76
HMGN1-202ENST00000380747 MAFO75444 373 aaPredicted RBP10.29□□□□□ -0.76
HMGN1-202ENST00000380747 RPS6KA5O75582 802 aa10.29□□□□□ -0.76
HMGN1-202ENST00000380747 MYOGP15173 224 aa10.29□□□□□ -0.76
HMGN1-202ENST00000380747 RPA1P27694 616 aa10.29□□□□□ -0.76
HMGN1-202ENST00000380747 PDIA5Q14554 519 aa10.29□□□□□ -0.76
HMGN1-202ENST00000380747 EMC2Q15006 297 aa10.29□□□□□ -0.76
HMGN1-202ENST00000380747 SF3A1Q15459 793 aaKnown RBP10.29□□□□□ -0.76
HMGN1-202ENST00000380747 ZRSR1Q15695 479 aaKnown RBP10.29□□□□□ -0.76
HMGN1-202ENST00000380747 IL17AQ16552 155 aa10.29□□□□□ -0.76
HMGN1-202ENST00000380747 FOXD4L5Q5VV16 416 aaPredicted RBP10.29□□□□□ -0.76
HMGN1-202ENST00000380747 DMRTA1Q5VZB9 504 aa10.29□□□□□ -0.76
HMGN1-202ENST00000380747 KRT79Q5XKE5 535 aa10.29□□□□□ -0.76
HMGN1-202ENST00000380747 FAM173BQ6P4H8 233 aa10.29□□□□□ -0.76
HMGN1-202ENST00000380747 RHPN2Q8IUC4 686 aa10.29□□□□□ -0.76
HMGN1-202ENST00000380747 EXOC8Q8IYI6 725 aa10.29□□□□□ -0.76
HMGN1-202ENST00000380747 MYOCDQ8IZQ8 938 aa10.29□□□□□ -0.76
HMGN1-202ENST00000380747 PHOSPHO2Q8TCD6 241 aa10.29□□□□□ -0.76
HMGN1-202ENST00000380747 SNX29Q8TEQ0 813 aa10.29□□□□□ -0.76
HMGN1-202ENST00000380747 FOXD4L4Q8WXT5 416 aaPredicted RBP10.29□□□□□ -0.76
HMGN1-202ENST00000380747 TMEM143Q96AN5 459 aa10.29□□□□□ -0.76
HMGN1-202ENST00000380747 NACC1Q96RE7 527 aa10.29□□□□□ -0.76
HMGN1-202ENST00000380747 POLR3CQ9BUI4 534 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms