RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 FIZ1Q96SL8 496 aa17.71■□□□□ 0.43
VPS16-203ENST00000380469 NEUROG2Q9H2A3 272 aa17.71■□□□□ 0.43
VPS16-203ENST00000380469 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.71■□□□□ 0.43
VPS16-203ENST00000380469 PPP1R9AQ9ULJ8 1098 aa17.71■□□□□ 0.43
VPS16-203ENST00000380469 SRRM3A6NNA2 597 aaPredicted RBP17.7■□□□□ 0.42
VPS16-203ENST00000380469 TRIM49P0CI25 452 aa17.7■□□□□ 0.42
VPS16-203ENST00000380469 TRIM49CP0CI26 452 aa17.7■□□□□ 0.42
VPS16-203ENST00000380469 LIG3P49916 1009 aa17.7■□□□□ 0.42
VPS16-203ENST00000380469 UBXN2AP68543 259 aa17.7■□□□□ 0.42
VPS16-203ENST00000380469 PRPF4BQ13523 1007 aaKnown RBP17.7■□□□□ 0.42
VPS16-203ENST00000380469 CLUL1Q15846 466 aa17.7■□□□□ 0.42
VPS16-203ENST00000380469 ARHGAP44Q17R89 818 aa17.7■□□□□ 0.42
VPS16-203ENST00000380469 MRPL11Q9Y3B7 192 aaKnown RBP17.7■□□□□ 0.42
VPS16-203ENST00000380469 ATXN2Q99700 1313 aaKnown RBP17.7■□□□□ 0.42
VPS16-203ENST00000380469 ARHGEF35A5YM69 484 aa17.7■□□□□ 0.42
VPS16-203ENST00000380469 RFX1P22670 979 aa17.7■□□□□ 0.42
VPS16-203ENST00000380469 PPATQ06203 517 aa17.7■□□□□ 0.42
VPS16-203ENST00000380469 ZNF844Q08AG5 666 aa17.7■□□□□ 0.42
VPS16-203ENST00000380469 CC2D2BQ6DHV5 1058 aa17.7■□□□□ 0.42
VPS16-203ENST00000380469 OR2W6PQ8NHA6 318 aa17.7■□□□□ 0.42
VPS16-203ENST00000380469 OLIG1Q8TAK6 271 aa17.7■□□□□ 0.42
VPS16-203ENST00000380469 SEC14L1Q92503 715 aa17.7■□□□□ 0.42
VPS16-203ENST00000380469 SYT11Q9BT88 431 aa17.7■□□□□ 0.42
VPS16-203ENST00000380469 GPR88Q9GZN0 384 aa17.7■□□□□ 0.42
VPS16-203ENST00000380469 RAB17Q9H0T7 212 aa17.7■□□□□ 0.42
VPS16-203ENST00000380469 UNC45AQ9H3U1 944 aa17.7■□□□□ 0.42
VPS16-203ENST00000380469 BCCIPQ9P287 314 aaKnown RBP eCLIP17.7■□□□□ 0.42
VPS16-203ENST00000380469 GOLGA6L10A0A0M3HER8 536 aa17.69■□□□□ 0.42
VPS16-203ENST00000380469 ANKRD62A6NC57 917 aa17.69■□□□□ 0.42
VPS16-203ENST00000380469 DDX3YO15523 660 aaKnown RBP17.69■□□□□ 0.42
VPS16-203ENST00000380469 MMP10P09238 476 aa17.69■□□□□ 0.42
VPS16-203ENST00000380469 VIL1P09327 827 aaKnown RBP17.69■□□□□ 0.42
VPS16-203ENST00000380469 BCRP11274 1271 aa17.69■□□□□ 0.42
VPS16-203ENST00000380469 KRT13P13646 458 aa17.69■□□□□ 0.42
VPS16-203ENST00000380469 ECE1P42892 770 aa17.69■□□□□ 0.42
VPS16-203ENST00000380469 BFSP1Q12934 665 aa17.69■□□□□ 0.42
VPS16-203ENST00000380469 PLS1Q14651 629 aa17.69■□□□□ 0.42
VPS16-203ENST00000380469 ODF2Q5BJF6 829 aa17.69■□□□□ 0.42
VPS16-203ENST00000380469 NAA35Q5VZE5 725 aa17.69■□□□□ 0.42
VPS16-203ENST00000380469 NLRP14Q86W24 1093 aa17.69■□□□□ 0.42
VPS16-203ENST00000380469 COL23A1Q86Y22 540 aaPredicted RBP17.69■□□□□ 0.42
VPS16-203ENST00000380469 SLC9A9Q8IVB4 645 aa17.69■□□□□ 0.42
VPS16-203ENST00000380469 CHURC1Q8WUH1 139 aa17.69■□□□□ 0.42
VPS16-203ENST00000380469 TEKT3Q9BXF9 490 aa17.69■□□□□ 0.42
VPS16-203ENST00000380469 CELF4Q9BZC1 486 aaKnown RBP17.69■□□□□ 0.42
VPS16-203ENST00000380469 CARD9Q9H257 536 aa17.69■□□□□ 0.42
VPS16-203ENST00000380469 HERC5Q9UII4 1024 aaKnown RBP17.69■□□□□ 0.42
VPS16-203ENST00000380469 GUCY2CP25092 1073 aa17.69■□□□□ 0.42
VPS16-203ENST00000380469 SETQ01105 290 aaPredicted RBP17.69■□□□□ 0.42
VPS16-203ENST00000380469 AGBL2Q5U5Z8 902 aa17.69■□□□□ 0.42
VPS16-203ENST00000380469 OTUD6BQ8N6M0 293 aa17.69■□□□□ 0.42
VPS16-203ENST00000380469 ZNF473Q8WTR7 871 aaKnown RBP17.69■□□□□ 0.42
VPS16-203ENST00000380469 CCT8L2Q96SF2 557 aa17.69■□□□□ 0.42
VPS16-203ENST00000380469 DPH5Q9H2P9 285 aa17.69■□□□□ 0.42
VPS16-203ENST00000380469 FLT3P36888 993 aa17.68■□□□□ 0.42
VPS16-203ENST00000380469 PTENP60484 403 aa17.68■□□□□ 0.42
VPS16-203ENST00000380469 DHX9Q08211 1270 aaKnown RBP17.68■□□□□ 0.42
VPS16-203ENST00000380469 CETN1Q12798 172 aa17.68■□□□□ 0.42
VPS16-203ENST00000380469 MYBPC2Q14324 1141 aa17.68■□□□□ 0.42
VPS16-203ENST00000380469 KIF22Q14807 665 aa17.68■□□□□ 0.42
VPS16-203ENST00000380469 TMC3Q7Z5M5 1100 aa17.68■□□□□ 0.42
VPS16-203ENST00000380469 RDH13Q8NBN7 331 aa17.68■□□□□ 0.42
VPS16-203ENST00000380469 HOOK2Q96ED9 719 aa17.68■□□□□ 0.42
VPS16-203ENST00000380469 AGPAT1Q99943 283 aa17.68■□□□□ 0.42
VPS16-203ENST00000380469 LXNQ9BS40 222 aa17.68■□□□□ 0.42
VPS16-203ENST00000380469 WRAP73Q9P2S5 460 aaPredicted RBP17.68■□□□□ 0.42
VPS16-203ENST00000380469 TMX2Q9Y320 296 aa17.68■□□□□ 0.42
VPS16-203ENST00000380469 E7EVH7 732 aa17.67■□□□□ 0.42
VPS16-203ENST00000380469 HIP1RO75146 1068 aa17.67■□□□□ 0.42
VPS16-203ENST00000380469 ARP10275 920 aa17.67■□□□□ 0.42
VPS16-203ENST00000380469 VTI1AQ96AJ9 217 aa17.67■□□□□ 0.42
VPS16-203ENST00000380469 ARHGEF26Q96DR7 871 aa17.67■□□□□ 0.42
VPS16-203ENST00000380469 PRMT6Q96LA8 375 aaPredicted RBP17.67■□□□□ 0.42
VPS16-203ENST00000380469 PAGR1Q9BTK6 254 aa17.67■□□□□ 0.42
VPS16-203ENST00000380469 THAP2Q9H0W7 228 aa17.67■□□□□ 0.42
VPS16-203ENST00000380469 ZNF219Q9P2Y4 722 aaPredicted RBP17.67■□□□□ 0.42
VPS16-203ENST00000380469 IGSF9BQ9UPX0 1349 aa17.67■□□□□ 0.42
VPS16-203ENST00000380469 SMCHD1A6NHR9 2005 aa17.67■□□□□ 0.42
VPS16-203ENST00000380469 MYO1FO00160 1098 aa17.67■□□□□ 0.42
VPS16-203ENST00000380469 FOXN3O00409 490 aaPredicted RBP17.67■□□□□ 0.42
VPS16-203ENST00000380469 DR1Q01658 176 aa17.67■□□□□ 0.42
VPS16-203ENST00000380469 POU5F1Q01860 360 aaKnown RBP17.67■□□□□ 0.42
VPS16-203ENST00000380469 KIAA1755Q5JYT7 1200 aa17.67■□□□□ 0.42
VPS16-203ENST00000380469 PHLDB3Q6NSJ2 640 aa17.67■□□□□ 0.42
VPS16-203ENST00000380469 RHOT2Q8IXI1 618 aa17.67■□□□□ 0.42
VPS16-203ENST00000380469 MYCBPAPQ8TBZ2 947 aa17.67■□□□□ 0.42
VPS16-203ENST00000380469 ACER1Q8TDN7 264 aa17.67■□□□□ 0.42
VPS16-203ENST00000380469 RANBP17Q9H2T7 1088 aaKnown RBP17.67■□□□□ 0.42
VPS16-203ENST00000380469 TMOD2Q9NZR1 351 aa17.67■□□□□ 0.42
VPS16-203ENST00000380469 COL11A2P13942 1736 aaPredicted RBP17.67■□□□□ 0.42
VPS16-203ENST00000380469 SCN9AQ15858 1988 aa17.67■□□□□ 0.42
VPS16-203ENST00000380469 IPO5O00410 1097 aaKnown RBP17.66■□□□□ 0.42
VPS16-203ENST00000380469 MEFVO15553 781 aaPredicted RBP17.66■□□□□ 0.42
VPS16-203ENST00000380469 LRRN2O75325 713 aa17.66■□□□□ 0.42
VPS16-203ENST00000380469 FAM107AO95990 144 aa17.66■□□□□ 0.42
VPS16-203ENST00000380469 SEC24CP53992 1094 aa17.66■□□□□ 0.42
VPS16-203ENST00000380469 DCAF12L1Q5VU92 463 aa17.66■□□□□ 0.42
VPS16-203ENST00000380469 BANK1Q8NDB2 785 aa17.66■□□□□ 0.42
VPS16-203ENST00000380469 UBE2TQ9NPD8 197 aaPredicted RBP17.66■□□□□ 0.42
VPS16-203ENST00000380469 TAS2R14Q9NYV8 317 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms