RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 SMTNP53814 917 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 ARHGAP4P98171 946 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 NFIXQ14938 502 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 LONRF1Q17RB8 773 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 ABCB5Q2M3G0 1257 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 FRMD5Q7Z6J6 570 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 PPP1R12CQ9BZL4 782 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 JMJD4Q9H9V9 463 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 HP1BP3Q5SSJ5 553 aaPredicted RBP12.26□□□□□ -0.45
SMAD9-202ENST00000379826 LIN9Q5TKA1 542 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 CCDC137Q6PK04 289 aaKnown RBP12.26□□□□□ -0.45
SMAD9-202ENST00000379826 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.26□□□□□ -0.45
SMAD9-202ENST00000379826 C1orf54Q8WWF1 131 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 TEKT3Q9BXF9 490 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 EDEM3Q9BZQ6 932 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 RRAGCQ9HB90 399 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 ARHGEF10LQ9HCE6 1279 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 MTMR4Q9NYA4 1195 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 ANAPC5Q9UJX4 755 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 TCP10L2B9ZVM9 353 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 EVI5O60447 810 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 FTLP02792 175 aaPredicted RBP12.26□□□□□ -0.45
SMAD9-202ENST00000379826 TAL1P17542 331 aaPredicted RBP12.26□□□□□ -0.45
SMAD9-202ENST00000379826 MAPK4P31152 587 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 FAM47CQ5HY64 1035 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 C9orf131Q5VYM1 1079 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 FAM47EQ6ZV65 393 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 SMC1BQ8NDV3 1235 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 HEMGNQ9BXL5 484 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 VCPKMTQ9H867 229 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 BLOC1S4Q9NUP1 217 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 RGPD5Q99666 1765 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 RSPH10B2B2RC85 870 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 RSPH10BP0C881 870 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 SSTR3P32745 418 aaPredicted RBP12.26□□□□□ -0.45
SMAD9-202ENST00000379826 USP11P51784 963 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 ERVK-9P63128 1117 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 SYDE2Q5VT97 1194 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 MASTLQ96GX5 879 aa12.26□□□□□ -0.45
SMAD9-202ENST00000379826 IFNB1P01574 187 aa12.25□□□□□ -0.45
SMAD9-202ENST00000379826 PON1P27169 355 aa12.25□□□□□ -0.45
SMAD9-202ENST00000379826 RCSD1Q6JBY9 416 aa12.25□□□□□ -0.45
SMAD9-202ENST00000379826 TTC16Q8NEE8 873 aa12.25□□□□□ -0.45
SMAD9-202ENST00000379826 PPP1R14CQ8TAE6 165 aa12.25□□□□□ -0.45
SMAD9-202ENST00000379826 RAB3IPQ96QF0 476 aaPredicted RBP12.25□□□□□ -0.45
SMAD9-202ENST00000379826 XPO6Q96QU8 1125 aaKnown RBP12.25□□□□□ -0.45
SMAD9-202ENST00000379826 OSGEPQ9NPF4 335 aa12.25□□□□□ -0.45
SMAD9-202ENST00000379826 ORC2Q13416 577 aaPredicted RBP12.25□□□□□ -0.45
SMAD9-202ENST00000379826 ZNF449Q6P9G9 518 aa12.25□□□□□ -0.45
SMAD9-202ENST00000379826 DDX20Q9UHI6 824 aaKnown RBP12.25□□□□□ -0.45
SMAD9-202ENST00000379826 NPR1P16066 1061 aa12.25□□□□□ -0.45
SMAD9-202ENST00000379826 SLMAPQ14BN4 828 aa12.25□□□□□ -0.45
SMAD9-202ENST00000379826 KIRREL3Q8IZU9 778 aa12.25□□□□□ -0.45
SMAD9-202ENST00000379826 GRK7Q8WTQ7 553 aa12.25□□□□□ -0.45
SMAD9-202ENST00000379826 EIF2AK1Q9BQI3 630 aaKnown RBP12.25□□□□□ -0.45
SMAD9-202ENST00000379826 DNAI2Q9GZS0 605 aa12.25□□□□□ -0.45
SMAD9-202ENST00000379826 SUFUQ9UMX1 484 aa12.25□□□□□ -0.45
SMAD9-202ENST00000379826 MED24O75448 989 aa12.25□□□□□ -0.45
SMAD9-202ENST00000379826 TNNI1P19237 187 aa12.25□□□□□ -0.45
SMAD9-202ENST00000379826 CASP4P49662 377 aa12.25□□□□□ -0.45
SMAD9-202ENST00000379826 MYO1EQ12965 1108 aa12.25□□□□□ -0.45
SMAD9-202ENST00000379826 TNS2Q63HR2 1409 aa12.25□□□□□ -0.45
SMAD9-202ENST00000379826 POTEAQ6S8J7 498 aa12.25□□□□□ -0.45
SMAD9-202ENST00000379826 RFFLQ8WZ73 363 aa12.25□□□□□ -0.45
SMAD9-202ENST00000379826 NUP85Q9BW27 656 aa12.25□□□□□ -0.45
SMAD9-202ENST00000379826 SALL4Q9UJQ4 1053 aa12.25□□□□□ -0.45
SMAD9-202ENST00000379826 TNS4Q8IZW8 715 aa12.24□□□□□ -0.45
SMAD9-202ENST00000379826 SYN2Q92777 582 aaPredicted RBP12.24□□□□□ -0.45
SMAD9-202ENST00000379826 NARFQ9UHQ1 456 aa12.24□□□□□ -0.45
SMAD9-202ENST00000379826 EXOC7Q9UPT5 735 aa12.24□□□□□ -0.45
SMAD9-202ENST00000379826 SPEF2Q9C093 1822 aa12.24□□□□□ -0.45
SMAD9-202ENST00000379826 WDR91A4D1P6 747 aa12.24□□□□□ -0.45
SMAD9-202ENST00000379826 CAND2O75155 1236 aa12.24□□□□□ -0.45
SMAD9-202ENST00000379826 MFAP3P55082 362 aa12.24□□□□□ -0.45
SMAD9-202ENST00000379826 KCNMA1Q12791 1236 aa12.24□□□□□ -0.45
SMAD9-202ENST00000379826 ARHGEF1Q92888 912 aaKnown RBP12.24□□□□□ -0.45
SMAD9-202ENST00000379826 ADAM33Q9BZ11 813 aa12.24□□□□□ -0.45
SMAD9-202ENST00000379826 STK25O00506 426 aa12.24□□□□□ -0.45
SMAD9-202ENST00000379826 OSBPP22059 807 aa12.24□□□□□ -0.45
SMAD9-202ENST00000379826 NPY5RQ15761 445 aa12.24□□□□□ -0.45
SMAD9-202ENST00000379826 XKR9Q5GH70 373 aa12.24□□□□□ -0.45
SMAD9-202ENST00000379826 KIAA1755Q5JYT7 1200 aa12.24□□□□□ -0.45
SMAD9-202ENST00000379826 CATSPER3Q86XQ3 398 aa12.24□□□□□ -0.45
SMAD9-202ENST00000379826 KIF2BQ8N4N8 673 aa12.24□□□□□ -0.45
SMAD9-202ENST00000379826 RAET1EQ8TD07 263 aa12.24□□□□□ -0.45
SMAD9-202ENST00000379826 SCFD1Q8WVM8 642 aa12.24□□□□□ -0.45
SMAD9-202ENST00000379826 STMN2Q93045 179 aa12.24□□□□□ -0.45
SMAD9-202ENST00000379826 C18orf8Q96DM3 657 aa12.24□□□□□ -0.45
SMAD9-202ENST00000379826 TCHPQ9BT92 498 aa12.24□□□□□ -0.45
SMAD9-202ENST00000379826 TCP11X1B4DZS4 312 aa12.24□□□□□ -0.45
SMAD9-202ENST00000379826 CYB5D1Q6P9G0 228 aa12.24□□□□□ -0.45
SMAD9-202ENST00000379826 LMNTD2Q8IXW0 634 aa12.24□□□□□ -0.45
SMAD9-202ENST00000379826 EPS8L3Q8TE67 593 aaKnown RBP12.24□□□□□ -0.45
SMAD9-202ENST00000379826 HAUS1Q96CS2 278 aa12.24□□□□□ -0.45
SMAD9-202ENST00000379826 FAM118BQ9BPY3 351 aa12.24□□□□□ -0.45
SMAD9-202ENST00000379826 PPP2R5AQ15172 486 aa12.24□□□□□ -0.45
SMAD9-202ENST00000379826 MUM1Q2TAK8 710 aa12.24□□□□□ -0.45
SMAD9-202ENST00000379826 AGBL2Q5U5Z8 902 aa12.24□□□□□ -0.45
SMAD9-202ENST00000379826 PPP1R18Q6NYC8 613 aa12.24□□□□□ -0.45
SMAD9-202ENST00000379826 BTBD6Q96KE9 485 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms