RNA–Protein interactions for RNA: ENST00000378735.5

KIF3A-201, Transcript of kinesin family member 3A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene KIF3A, Length 3,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-201ENST00000378735 LRRC41Q15345 812 aa14.77□□□□□ -0.05
KIF3A-201ENST00000378735 FAM47AQ5JRC9 791 aa14.77□□□□□ -0.05
KIF3A-201ENST00000378735 RPUSD2Q8IZ73 545 aaKnown RBP14.77□□□□□ -0.05
KIF3A-201ENST00000378735 PNMA1Q8ND90 353 aa14.77□□□□□ -0.05
KIF3A-201ENST00000378735 GORASP1Q9BQQ3 440 aa14.77□□□□□ -0.05
KIF3A-201ENST00000378735 SYT15Q9BQS2 421 aa14.77□□□□□ -0.05
KIF3A-201ENST00000378735 C6orf50Q9HD87 102 aa14.77□□□□□ -0.05
KIF3A-201ENST00000378735 SNX24Q9Y343 169 aa14.77□□□□□ -0.05
KIF3A-201ENST00000378735 NR2E1Q9Y466 385 aa14.77□□□□□ -0.05
KIF3A-201ENST00000378735 MROH7Q68CQ1 1323 aa14.76□□□□□ -0.05
KIF3A-201ENST00000378735 PITPNM2Q9BZ72 1349 aa14.76□□□□□ -0.05
KIF3A-201ENST00000378735 NUP98P52948 1817 aa14.76□□□□□ -0.05
KIF3A-201ENST00000378735 TMEM120BA0PK00 339 aa14.76□□□□□ -0.05
KIF3A-201ENST00000378735 PHF2O75151 1096 aa14.76□□□□□ -0.05
KIF3A-201ENST00000378735 CYP19A1P11511 503 aaPredicted RBP14.76□□□□□ -0.05
KIF3A-201ENST00000378735 PPATQ06203 517 aa14.76□□□□□ -0.05
KIF3A-201ENST00000378735 MTFR1Q15390 333 aa14.76□□□□□ -0.05
KIF3A-201ENST00000378735 TBC1D25Q3MII6 688 aa14.76□□□□□ -0.05
KIF3A-201ENST00000378735 ZC3H12AQ5D1E8 599 aaKnown RBP14.76□□□□□ -0.05
KIF3A-201ENST00000378735 SPDYAQ5MJ70 313 aa14.76□□□□□ -0.05
KIF3A-201ENST00000378735 RFFLQ8WZ73 363 aa14.76□□□□□ -0.05
KIF3A-201ENST00000378735 DNAJC19Q96DA6 116 aa14.76□□□□□ -0.05
KIF3A-201ENST00000378735 IRAK4Q9NWZ3 460 aa14.76□□□□□ -0.05
KIF3A-201ENST00000378735 ARPP21Q9UBL0 812 aaPredicted RBP14.76□□□□□ -0.05
KIF3A-201ENST00000378735 KIAA1551Q9HCM1 1747 aa14.76□□□□□ -0.05
KIF3A-201ENST00000378735 SPDYE5A6NIY4 337 aa14.76□□□□□ -0.05
KIF3A-201ENST00000378735 SP100P23497 879 aaPredicted RBP14.76□□□□□ -0.05
KIF3A-201ENST00000378735 DYNLL1P63167 89 aaKnown RBP14.76□□□□□ -0.05
KIF3A-201ENST00000378735 ZNF568Q3ZCX4 644 aa14.76□□□□□ -0.05
KIF3A-201ENST00000378735 SESTD1Q86VW0 696 aa14.76□□□□□ -0.05
KIF3A-201ENST00000378735 FBXO41Q8TF61 875 aa14.76□□□□□ -0.05
KIF3A-201ENST00000378735 MAGEB18Q96M61 343 aa14.76□□□□□ -0.05
KIF3A-201ENST00000378735 ATP8A2Q9NTI2 1148 aa14.76□□□□□ -0.05
KIF3A-201ENST00000378735 TRIM33Q9UPN9 1127 aa14.76□□□□□ -0.05
KIF3A-201ENST00000378735 RNF8O76064 485 aa14.76□□□□□ -0.05
KIF3A-201ENST00000378735 GGPS1O95749 300 aa14.76□□□□□ -0.05
KIF3A-201ENST00000378735 TMEM253P0C7T8 217 aa14.76□□□□□ -0.05
KIF3A-201ENST00000378735 CUL3Q13618 768 aa14.76□□□□□ -0.05
KIF3A-201ENST00000378735 DCAF12L1Q5VU92 463 aa14.76□□□□□ -0.05
KIF3A-201ENST00000378735 VSTM1Q6UX27 236 aa14.76□□□□□ -0.05
KIF3A-201ENST00000378735 FRMD5Q7Z6J6 570 aa14.76□□□□□ -0.05
KIF3A-201ENST00000378735 RBBP8NLQ8NC74 664 aaPredicted RBP14.76□□□□□ -0.05
KIF3A-201ENST00000378735 DNAJC9Q8WXX5 260 aa14.76□□□□□ -0.05
KIF3A-201ENST00000378735 EZH1Q92800 747 aaPredicted RBP14.76□□□□□ -0.05
KIF3A-201ENST00000378735 ARHGEF2Q92974 986 aaKnown RBP14.76□□□□□ -0.05
KIF3A-201ENST00000378735 IFT43Q96FT9 208 aa14.76□□□□□ -0.05
KIF3A-201ENST00000378735 RMDN2Q96LZ7 410 aa14.76□□□□□ -0.05
KIF3A-201ENST00000378735 TRIM4Q9C037 500 aa14.76□□□□□ -0.05
KIF3A-201ENST00000378735 CCDC113Q9H0I3 377 aa14.76□□□□□ -0.05
KIF3A-201ENST00000378735 JAM2P57087 298 aa14.75□□□□□ -0.05
KIF3A-201ENST00000378735 KRT79Q5XKE5 535 aa14.75□□□□□ -0.05
KIF3A-201ENST00000378735 CYFIP1Q7L576 1253 aa14.75□□□□□ -0.05
KIF3A-201ENST00000378735 GLIS3Q8NEA6 775 aa14.75□□□□□ -0.05
KIF3A-201ENST00000378735 GLG1Q92896 1179 aa14.75□□□□□ -0.05
KIF3A-201ENST00000378735 ABCF2Q9UG63 623 aa14.75□□□□□ -0.05
KIF3A-201ENST00000378735 CETN3O15182 167 aa14.75□□□□□ -0.05
KIF3A-201ENST00000378735 ALAS1P13196 640 aa14.75□□□□□ -0.05
KIF3A-201ENST00000378735 IL6STP40189 918 aaPredicted RBP14.75□□□□□ -0.05
KIF3A-201ENST00000378735 SETDB1Q15047 1291 aa14.75□□□□□ -0.05
KIF3A-201ENST00000378735 PPP1R15BQ5SWA1 713 aa14.75□□□□□ -0.05
KIF3A-201ENST00000378735 TMEM154Q6P9G4 183 aa14.75□□□□□ -0.05
KIF3A-201ENST00000378735 ARHGAP22Q7Z5H3 698 aa14.75□□□□□ -0.05
KIF3A-201ENST00000378735 FAM136AQ96C01 138 aa14.75□□□□□ -0.05
KIF3A-201ENST00000378735 KCTD10Q9H3F6 313 aa14.75□□□□□ -0.05
KIF3A-201ENST00000378735 DBR1Q9UK59 544 aaKnown RBP14.75□□□□□ -0.05
KIF3A-201ENST00000378735 PCDHA3Q9Y5H8 950 aa14.75□□□□□ -0.05
KIF3A-201ENST00000378735 SYNGAP1Q96PV0 1343 aa14.75□□□□□ -0.05
KIF3A-201ENST00000378735 SNAP23O00161 211 aa14.74□□□□□ -0.05
KIF3A-201ENST00000378735 TXKP42681 527 aa14.74□□□□□ -0.05
KIF3A-201ENST00000378735 RPL21P46778 160 aaKnown RBP14.74□□□□□ -0.05
KIF3A-201ENST00000378735 RASSF2P50749 326 aa14.74□□□□□ -0.05
KIF3A-201ENST00000378735 CALCRLQ16602 461 aa14.74□□□□□ -0.05
KIF3A-201ENST00000378735 PTPROQ16827 1216 aa14.74□□□□□ -0.05
KIF3A-201ENST00000378735 ART4Q93070 314 aa14.74□□□□□ -0.05
KIF3A-201ENST00000378735 ERVK-5Q9HDB9 667 aa14.74□□□□□ -0.05
KIF3A-201ENST00000378735 BMP2KQ9NSY1 1161 aaPredicted RBP14.74□□□□□ -0.05
KIF3A-201ENST00000378735 THSD7AQ9UPZ6 1657 aa14.74□□□□□ -0.05
KIF3A-201ENST00000378735 ERVV-1B6SEH8 477 aa14.74□□□□□ -0.05
KIF3A-201ENST00000378735 DDX3XO00571 662 aaKnown RBP eCLIP14.74□□□□□ -0.051e-6■■■□□ 16.8
KIF3A-201ENST00000378735 CYTH3O43739 400 aa14.74□□□□□ -0.05
KIF3A-201ENST00000378735 AFPP02771 609 aaKnown RBP14.74□□□□□ -0.05
KIF3A-201ENST00000378735 YARSP54577 528 aaKnown RBP14.74□□□□□ -0.05
KIF3A-201ENST00000378735 GALCP54803 685 aa14.74□□□□□ -0.05
KIF3A-201ENST00000378735 MGAT5Q09328 741 aa14.74□□□□□ -0.05
KIF3A-201ENST00000378735 EXOC3L4Q17RC7 722 aa14.74□□□□□ -0.05
KIF3A-201ENST00000378735 OR52E8Q6IFG1 317 aa14.74□□□□□ -0.05
KIF3A-201ENST00000378735 INTS8Q75QN2 995 aaKnown RBP14.74□□□□□ -0.05
KIF3A-201ENST00000378735 ECHDC2Q86YB7 292 aa14.74□□□□□ -0.05
KIF3A-201ENST00000378735 ANKLE1Q8NAG6 615 aa14.74□□□□□ -0.05
KIF3A-201ENST00000378735 SLC30A5Q8TAD4 765 aa14.74□□□□□ -0.05
KIF3A-201ENST00000378735 RBM46Q8TBY0 533 aaKnown RBP14.74□□□□□ -0.05
KIF3A-201ENST00000378735 KIFAP3Q92845 792 aa14.74□□□□□ -0.05
KIF3A-201ENST00000378735 TGS1Q96RS0 853 aaKnown RBP14.74□□□□□ -0.05
KIF3A-201ENST00000378735 NUDCD1Q96RS6 583 aa14.74□□□□□ -0.05
KIF3A-201ENST00000378735 SPZ1Q9BXG8 430 aa14.74□□□□□ -0.05
KIF3A-201ENST00000378735 CRNKL1Q9BZJ0 848 aaKnown RBP14.74□□□□□ -0.05
KIF3A-201ENST00000378735 DCP1AQ9NPI6 582 aaPredicted RBP14.74□□□□□ -0.05
KIF3A-201ENST00000378735 SEC63Q9UGP8 760 aaKnown RBP14.74□□□□□ -0.05
KIF3A-201ENST00000378735 HDAC9Q9UKV0 1011 aa14.74□□□□□ -0.05
KIF3A-201ENST00000378735 SH3BP1Q9Y3L3 701 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms