RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 CTNND2Q9UQB3 1225 aa17.41■□□□□ 0.38
CCDC107-204ENST00000378409 AKT3Q9Y243 479 aa17.41■□□□□ 0.38
CCDC107-204ENST00000378409 GRIN2DO15399 1336 aa17.41■□□□□ 0.38
CCDC107-204ENST00000378409 LRRIQ4A6NIV6 560 aa17.4■□□□□ 0.38
CCDC107-204ENST00000378409 TREHO43280 583 aa17.4■□□□□ 0.38
CCDC107-204ENST00000378409 SGPL1O95470 568 aa17.4■□□□□ 0.38
CCDC107-204ENST00000378409 CAVIN2O95810 425 aa17.4■□□□□ 0.38
CCDC107-204ENST00000378409 MAPTP10636 758 aaKnown RBP17.4■□□□□ 0.38
CCDC107-204ENST00000378409 PPP1R2P41236 205 aa17.4■□□□□ 0.38
CCDC107-204ENST00000378409 ZNF165P49910 485 aa17.4■□□□□ 0.38
CCDC107-204ENST00000378409 NCKAP1LP55160 1127 aa17.4■□□□□ 0.38
CCDC107-204ENST00000378409 ADAM17P78536 824 aa17.4■□□□□ 0.38
CCDC107-204ENST00000378409 LAMTOR4Q0VGL1 99 aa17.4■□□□□ 0.38
CCDC107-204ENST00000378409 MXD4Q14582 209 aaPredicted RBP17.4■□□□□ 0.38
CCDC107-204ENST00000378409 ZC2HC1CQ53FD0 456 aaPredicted RBP17.4■□□□□ 0.38
CCDC107-204ENST00000378409 COBLL1Q53SF7 1204 aa17.4■□□□□ 0.38
CCDC107-204ENST00000378409 GDF6Q6KF10 455 aaPredicted RBP17.4■□□□□ 0.38
CCDC107-204ENST00000378409 RUFY4Q6ZNE9 571 aa17.4■□□□□ 0.38
CCDC107-204ENST00000378409 STXBP4Q6ZWJ1 553 aa17.4■□□□□ 0.38
CCDC107-204ENST00000378409 ZNF720Q7Z2F6 126 aa17.4■□□□□ 0.38
CCDC107-204ENST00000378409 SESTD1Q86VW0 696 aa17.4■□□□□ 0.38
CCDC107-204ENST00000378409 KSR1Q8IVT5 923 aa17.4■□□□□ 0.38
CCDC107-204ENST00000378409 GUF1Q8N442 669 aaKnown RBP17.4■□□□□ 0.38
CCDC107-204ENST00000378409 SLC17A8Q8NDX2 589 aa17.4■□□□□ 0.38
CCDC107-204ENST00000378409 KIFC3Q9BVG8 833 aa17.4■□□□□ 0.38
CCDC107-204ENST00000378409 CRISPLD2Q9H0B8 497 aa17.4■□□□□ 0.38
CCDC107-204ENST00000378409 KCNG1Q9UIX4 513 aa17.4■□□□□ 0.38
CCDC107-204ENST00000378409 KIAA0100Q14667 2235 aaKnown RBP17.4■□□□□ 0.38
CCDC107-204ENST00000378409 A0A0U1RQG5 324 aaPredicted RBP17.39■□□□□ 0.37
CCDC107-204ENST00000378409 SMIM35A0A1B0GVV1 85 aa17.39■□□□□ 0.37
CCDC107-204ENST00000378409 PSMA7O14818 248 aa17.39■□□□□ 0.37
CCDC107-204ENST00000378409 EIF3DO15371 548 aaKnown RBP eCLIP17.39■□□□□ 0.37
CCDC107-204ENST00000378409 PRPF6O94906 941 aaKnown RBP17.39■□□□□ 0.37
CCDC107-204ENST00000378409 KIF20AO95235 890 aa17.39■□□□□ 0.37
CCDC107-204ENST00000378409 SLC34A2O95436 690 aa17.39■□□□□ 0.37
CCDC107-204ENST00000378409 SRGAP2CP0DJJ0 459 aa17.39■□□□□ 0.37
CCDC107-204ENST00000378409 NAMPTP43490 491 aa17.39■□□□□ 0.37
CCDC107-204ENST00000378409 PAK1Q13153 545 aa17.39■□□□□ 0.37
CCDC107-204ENST00000378409 CAPSQ13938 189 aa17.39■□□□□ 0.37
CCDC107-204ENST00000378409 EPM2AIP1Q7L775 607 aaPredicted RBP17.39■□□□□ 0.37
CCDC107-204ENST00000378409 HAUS6Q7Z4H7 955 aa17.39■□□□□ 0.37
CCDC107-204ENST00000378409 NELFCDQ8IXH7 590 aa17.39■□□□□ 0.37
CCDC107-204ENST00000378409 KIAA0319LQ8IZA0 1049 aa17.39■□□□□ 0.37
CCDC107-204ENST00000378409 SCFD1Q8WVM8 642 aa17.39■□□□□ 0.37
CCDC107-204ENST00000378409 NELFBQ8WX92 580 aa17.39■□□□□ 0.37
CCDC107-204ENST00000378409 NLRP4Q96MN2 994 aa17.39■□□□□ 0.37
CCDC107-204ENST00000378409 PCDHB13Q9Y5F0 798 aa17.39■□□□□ 0.37
CCDC107-204ENST00000378409 H0YCG3 227 aa17.38■□□□□ 0.37
CCDC107-204ENST00000378409 ASAP2O43150 1006 aa17.38■□□□□ 0.37
CCDC107-204ENST00000378409 VTNP04004 478 aa17.38■□□□□ 0.37
CCDC107-204ENST00000378409 STX17P56962 302 aa17.38■□□□□ 0.37
CCDC107-204ENST00000378409 PTPN11Q06124 597 aaPredicted RBP17.38■□□□□ 0.37
CCDC107-204ENST00000378409 ALCAMQ13740 583 aa17.38■□□□□ 0.37
CCDC107-204ENST00000378409 TFDP1Q14186 410 aa17.38■□□□□ 0.37
CCDC107-204ENST00000378409 CT47A1Q5JQC4 288 aaPredicted RBP17.38■□□□□ 0.37
CCDC107-204ENST00000378409 AOPEPQ8N6M6 819 aa17.38■□□□□ 0.37
CCDC107-204ENST00000378409 RNF149Q8NC42 400 aa17.38■□□□□ 0.37
CCDC107-204ENST00000378409 RNF214Q8ND24 703 aa17.38■□□□□ 0.37
CCDC107-204ENST00000378409 TMEM161BQ8NDZ6 487 aa17.38■□□□□ 0.37
CCDC107-204ENST00000378409 DEPTORQ8TB45 409 aa17.38■□□□□ 0.37
CCDC107-204ENST00000378409 FAM200AQ8TCP9 573 aa17.38■□□□□ 0.37
CCDC107-204ENST00000378409 DNAJB3Q8WWF6 145 aa17.38■□□□□ 0.37
CCDC107-204ENST00000378409 DHTKD1Q96HY7 919 aaPredicted RBP17.38■□□□□ 0.37
CCDC107-204ENST00000378409 ZNF668Q96K58 619 aaPredicted RBP17.38■□□□□ 0.37
CCDC107-204ENST00000378409 PPP1R16BQ96T49 567 aa17.38■□□□□ 0.37
CCDC107-204ENST00000378409 NTPCRQ9BSD7 190 aaKnown RBP17.38■□□□□ 0.37
CCDC107-204ENST00000378409 CBX8Q9HC52 389 aa17.38■□□□□ 0.37
CCDC107-204ENST00000378409 UBE4BO95155 1302 aa17.38■□□□□ 0.37
CCDC107-204ENST00000378409 ADGRA3Q8IWK6 1321 aa17.38■□□□□ 0.37
CCDC107-204ENST00000378409 DENND3A2RUS2 1198 aa17.37■□□□□ 0.37
CCDC107-204ENST00000378409 PPP1R37O75864 691 aa17.37■□□□□ 0.37
CCDC107-204ENST00000378409 ERCC5P28715 1186 aaPredicted RBP17.37■□□□□ 0.37
CCDC107-204ENST00000378409 GJA8P48165 433 aa17.37■□□□□ 0.37
CCDC107-204ENST00000378409 MLLT1Q03111 559 aaPredicted RBP17.37■□□□□ 0.37
CCDC107-204ENST00000378409 PTGISQ16647 500 aa17.37■□□□□ 0.37
CCDC107-204ENST00000378409 BMT2Q1RMZ1 405 aa17.37■□□□□ 0.37
CCDC107-204ENST00000378409 ZNF507Q8TCN5 953 aa17.37■□□□□ 0.37
CCDC107-204ENST00000378409 P2RX5Q93086 422 aa17.37■□□□□ 0.37
CCDC107-204ENST00000378409 SCLT1Q96NL6 688 aa17.37■□□□□ 0.37
CCDC107-204ENST00000378409 BPIFA3Q9BQP9 254 aa17.37■□□□□ 0.37
CCDC107-204ENST00000378409 TMEM106CQ9BVX2 250 aa17.37■□□□□ 0.37
CCDC107-204ENST00000378409 STRA6Q9BX79 667 aa17.37■□□□□ 0.37
CCDC107-204ENST00000378409 RBSNQ9H1K0 784 aa17.37■□□□□ 0.37
CCDC107-204ENST00000378409 ST6GALNAC4Q9H4F1 302 aa17.37■□□□□ 0.37
CCDC107-204ENST00000378409 ARHGAP28Q9P2N2 729 aa17.37■□□□□ 0.37
CCDC107-204ENST00000378409 TRIM49BA6NDI0 452 aa17.36■□□□□ 0.37
CCDC107-204ENST00000378409 CCNE1P24864 410 aa17.36■□□□□ 0.37
CCDC107-204ENST00000378409 NLRP11P59045 1033 aaKnown RBP17.36■□□□□ 0.37
CCDC107-204ENST00000378409 GTF2BQ00403 316 aa17.36■□□□□ 0.37
CCDC107-204ENST00000378409 KCNA1Q09470 495 aa17.36■□□□□ 0.37
CCDC107-204ENST00000378409 TMEM62Q0P6H9 643 aa17.36■□□□□ 0.37
CCDC107-204ENST00000378409 TAF2Q6P1X5 1199 aa17.36■□□□□ 0.37
CCDC107-204ENST00000378409 ZBTB8OSQ8IWT0 167 aa17.36■□□□□ 0.37
CCDC107-204ENST00000378409 HVCN1Q96D96 273 aa17.36■□□□□ 0.37
CCDC107-204ENST00000378409 ACCSQ96QU6 501 aa17.36■□□□□ 0.37
CCDC107-204ENST00000378409 SEMA6BQ9H3T3 888 aa17.36■□□□□ 0.37
CCDC107-204ENST00000378409 RWDD2AQ9UIY3 292 aa17.36■□□□□ 0.37
CCDC107-204ENST00000378409 NOD1Q9Y239 953 aa17.36■□□□□ 0.37
CCDC107-204ENST00000378409 BICDL2A1A5D9 508 aa17.35■□□□□ 0.37
CCDC107-204ENST00000378409 BECN2A8MW95 431 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms