RNA–Protein interactions for RNA: ENST00000378183.8

TRIM13-203, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 1,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-203ENST00000378183 UBA7P41226 1012 aa22.8■■□□□ 1.24
TRIM13-203ENST00000378183 CAPSQ13938 189 aa22.8■■□□□ 1.24
TRIM13-203ENST00000378183 MXD4Q14582 209 aaPredicted RBP22.8■■□□□ 1.24
TRIM13-203ENST00000378183 RNF149Q8NC42 400 aa22.8■■□□□ 1.24
TRIM13-203ENST00000378183 MCPH1Q8NEM0 835 aa22.8■■□□□ 1.24
TRIM13-203ENST00000378183 ADAM2Q99965 735 aa22.8■■□□□ 1.24
TRIM13-203ENST00000378183 NT5C3AQ9H0P0 336 aa22.8■■□□□ 1.24
TRIM13-203ENST00000378183 SEMA6BQ9H3T3 888 aa22.8■■□□□ 1.24
TRIM13-203ENST00000378183 MINDY3Q9H8M7 445 aa22.8■■□□□ 1.24
TRIM13-203ENST00000378183 POLD4Q9HCU8 107 aa22.8■■□□□ 1.24
TRIM13-203ENST00000378183 RGS18Q9NS28 235 aa22.8■■□□□ 1.24
TRIM13-203ENST00000378183 DAXXQ9UER7 740 aaPredicted RBP22.8■■□□□ 1.24
TRIM13-203ENST00000378183 CHD9Q3L8U1 2897 aa22.79■■□□□ 1.24
TRIM13-203ENST00000378183 COL4A6Q14031 1691 aa22.79■■□□□ 1.24
TRIM13-203ENST00000378183 LCHNA4D1U4 455 aa22.79■■□□□ 1.24
TRIM13-203ENST00000378183 TLL1O43897 1013 aa22.79■■□□□ 1.24
TRIM13-203ENST00000378183 HTRA4P83105 476 aaPredicted RBP22.79■■□□□ 1.24
TRIM13-203ENST00000378183 KARSQ15046 597 aaKnown RBP22.79■■□□□ 1.24
TRIM13-203ENST00000378183 STK38Q15208 465 aa22.79■■□□□ 1.24
TRIM13-203ENST00000378183 FAM102BQ5T8I3 360 aa22.79■■□□□ 1.24
TRIM13-203ENST00000378183 ZNF697Q5TEC3 545 aa22.79■■□□□ 1.24
TRIM13-203ENST00000378183 FAM43BQ6ZT52 329 aaPredicted RBP22.79■■□□□ 1.24
TRIM13-203ENST00000378183 DEFB123Q8N688 67 aa22.79■■□□□ 1.24
TRIM13-203ENST00000378183 ZBED2Q9BTP6 218 aa22.79■■□□□ 1.24
TRIM13-203ENST00000378183 CCSER1Q9C0I3 900 aa22.79■■□□□ 1.24
TRIM13-203ENST00000378183 TMEM265A0A087WTH1 108 aa22.78■■□□□ 1.24
TRIM13-203ENST00000378183 YEATS4O95619 227 aa22.78■■□□□ 1.24
TRIM13-203ENST00000378183 CA3P07451 260 aa22.78■■□□□ 1.24
TRIM13-203ENST00000378183 PTENP60484 403 aa22.78■■□□□ 1.24
TRIM13-203ENST00000378183 C1orf186Q6ZWK4 172 aa22.78■■□□□ 1.24
TRIM13-203ENST00000378183 SRGAP1Q7Z6B7 1085 aa22.78■■□□□ 1.24
TRIM13-203ENST00000378183 KCTD17Q8N5Z5 321 aa22.78■■□□□ 1.24
TRIM13-203ENST00000378183 KRI1Q8N9T8 703 aaKnown RBP22.78■■□□□ 1.24
TRIM13-203ENST00000378183 BSNDQ8WZ55 320 aa22.78■■□□□ 1.24
TRIM13-203ENST00000378183 CDK5RAP3Q96JB5 506 aa22.78■■□□□ 1.24
TRIM13-203ENST00000378183 FAM161BQ96MY7 647 aa22.78■■□□□ 1.24
TRIM13-203ENST00000378183 RAD9AQ99638 391 aa22.78■■□□□ 1.24
TRIM13-203ENST00000378183 RUSC1Q9BVN2 902 aa22.78■■□□□ 1.24
TRIM13-203ENST00000378183 INO80BQ9C086 356 aaPredicted RBP22.78■■□□□ 1.24
TRIM13-203ENST00000378183 TCHHQ07283 1943 aa22.77■■□□□ 1.24
TRIM13-203ENST00000378183 C9IYK1 514 aa22.77■■□□□ 1.24
TRIM13-203ENST00000378183 SPTLC2O15270 562 aa22.77■■□□□ 1.24
TRIM13-203ENST00000378183 PPP6R2O75170 966 aa22.77■■□□□ 1.24
TRIM13-203ENST00000378183 SLC12A3P55017 1021 aa22.77■■□□□ 1.24
TRIM13-203ENST00000378183 DNM1Q05193 864 aaKnown RBP22.77■■□□□ 1.24
TRIM13-203ENST00000378183 POU5F1BQ06416 359 aa22.77■■□□□ 1.24
TRIM13-203ENST00000378183 RINT1Q6NUQ1 792 aa22.77■■□□□ 1.24
TRIM13-203ENST00000378183 IFNLR1Q8IU57 520 aaPredicted RBP22.77■■□□□ 1.24
TRIM13-203ENST00000378183 SYT2Q8N9I0 419 aaPredicted RBP22.77■■□□□ 1.24
TRIM13-203ENST00000378183 SYMPKQ92797 1274 aaKnown RBP22.77■■□□□ 1.24
TRIM13-203ENST00000378183 CALML4Q96GE6 196 aa22.77■■□□□ 1.24
TRIM13-203ENST00000378183 CHAMP1Q96JM3 812 aa22.77■■□□□ 1.24
TRIM13-203ENST00000378183 ZNF576Q9H609 170 aa22.77■■□□□ 1.24
TRIM13-203ENST00000378183 BLOC1S4Q9NUP1 217 aa22.77■■□□□ 1.24
TRIM13-203ENST00000378183 MTMR10Q9NXD2 777 aa22.77■■□□□ 1.24
TRIM13-203ENST00000378183 CDH23Q9H251 3354 aa22.76■■□□□ 1.23
TRIM13-203ENST00000378183 DENND3A2RUS2 1198 aa22.76■■□□□ 1.23
TRIM13-203ENST00000378183 PLA2G4BP0C869 781 aa22.76■■□□□ 1.23
TRIM13-203ENST00000378183 PLCG1P19174 1290 aa22.76■■□□□ 1.23
TRIM13-203ENST00000378183 SFPQP23246 707 aaKnown RBP eCLIP22.76■■□□□ 1.23
TRIM13-203ENST00000378183 DDIT3P35638 169 aa22.76■■□□□ 1.23
TRIM13-203ENST00000378183 PHKA2P46019 1235 aa22.76■■□□□ 1.23
TRIM13-203ENST00000378183 SARSP49591 514 aaKnown RBP22.76■■□□□ 1.23
TRIM13-203ENST00000378183 FAM189BP81408 668 aa22.76■■□□□ 1.23
TRIM13-203ENST00000378183 TFDP1Q14186 410 aa22.76■■□□□ 1.23
TRIM13-203ENST00000378183 ATL3Q6DD88 541 aa22.76■■□□□ 1.23
TRIM13-203ENST00000378183 SLC28A3Q9HAS3 691 aa22.76■■□□□ 1.23
TRIM13-203ENST00000378183 RC3H2Q9HBD1 1191 aaKnown RBP22.76■■□□□ 1.23
TRIM13-203ENST00000378183 C1orf112Q9NSG2 853 aa22.76■■□□□ 1.23
TRIM13-203ENST00000378183 INSL6Q9Y581 213 aa22.76■■□□□ 1.23
TRIM13-203ENST00000378183 MYH11P35749 1972 aa22.76■■□□□ 1.23
TRIM13-203ENST00000378183 TAP1Q03518 808 aa22.75■■□□□ 1.23
TRIM13-203ENST00000378183 SLC24A5Q71RS6 500 aa22.75■■□□□ 1.23
TRIM13-203ENST00000378183 CATSPER4Q7RTX7 472 aa22.75■■□□□ 1.23
TRIM13-203ENST00000378183 SPRED2Q7Z698 418 aa22.75■■□□□ 1.23
TRIM13-203ENST00000378183 DAW1Q8N136 415 aa22.75■■□□□ 1.23
TRIM13-203ENST00000378183 SP7Q8TDD2 431 aaPredicted RBP22.75■■□□□ 1.23
TRIM13-203ENST00000378183 NFKBIZQ9BYH8 718 aa22.75■■□□□ 1.23
TRIM13-203ENST00000378183 FNDC1Q4ZHG4 1894 aaPredicted RBP22.75■■□□□ 1.23
TRIM13-203ENST00000378183 DGKIO75912 1065 aa22.74■■□□□ 1.23
TRIM13-203ENST00000378183 ZSCAN20P17040 1043 aaPredicted RBP22.74■■□□□ 1.23
TRIM13-203ENST00000378183 MBTD1Q05BQ5 628 aa22.74■■□□□ 1.23
TRIM13-203ENST00000378183 MAPK7Q13164 816 aa22.74■■□□□ 1.23
TRIM13-203ENST00000378183 GRIN2CQ14957 1233 aa22.74■■□□□ 1.23
TRIM13-203ENST00000378183 PPP2R2DQ66LE6 453 aa22.74■■□□□ 1.23
TRIM13-203ENST00000378183 NPAS4Q8IUM7 802 aa22.74■■□□□ 1.23
TRIM13-203ENST00000378183 ZNF689Q96CS4 500 aaPredicted RBP22.74■■□□□ 1.23
TRIM13-203ENST00000378183 GUCD1Q96NT3 240 aa22.74■■□□□ 1.23
TRIM13-203ENST00000378183 CHST12Q9NRB3 414 aa22.74■■□□□ 1.23
TRIM13-203ENST00000378183 CHD7Q9P2D1 2997 aa22.74■■□□□ 1.23
TRIM13-203ENST00000378183 HIP1RO75146 1068 aa22.73■■□□□ 1.23
TRIM13-203ENST00000378183 SSBP05455 408 aaKnown RBP eCLIP22.73■■□□□ 1.23
TRIM13-203ENST00000378183 HOXA11P31270 313 aaPredicted RBP22.73■■□□□ 1.23
TRIM13-203ENST00000378183 AMHR2Q16671 573 aa22.73■■□□□ 1.23
TRIM13-203ENST00000378183 ARSHQ5FYA8 562 aa22.73■■□□□ 1.23
TRIM13-203ENST00000378183 CDCA2Q69YH5 1023 aaPredicted RBP22.73■■□□□ 1.23
TRIM13-203ENST00000378183 RAD54LQ92698 747 aa22.73■■□□□ 1.23
TRIM13-203ENST00000378183 KIFAP3Q92845 792 aa22.73■■□□□ 1.23
TRIM13-203ENST00000378183 YME1L1Q96TA2 773 aa22.73■■□□□ 1.23
TRIM13-203ENST00000378183 AGPAT5Q9NUQ2 364 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms