RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 IFI16Q16666 785 aaKnown RBP18■□□□□ 0.47
PCDHA1-201ENST00000378133 METTL13Q8N6R0 699 aa18■□□□□ 0.47
PCDHA1-201ENST00000378133 TPCN2Q8NHX9 752 aa18■□□□□ 0.47
PCDHA1-201ENST00000378133 SLC35C1Q96A29 364 aa18■□□□□ 0.47
PCDHA1-201ENST00000378133 SIX2Q9NPC8 291 aa18■□□□□ 0.47
PCDHA1-201ENST00000378133 TYW1Q9NV66 732 aaKnown RBP18■□□□□ 0.47
PCDHA1-201ENST00000378133 GCNT4Q9P109 453 aa18■□□□□ 0.47
PCDHA1-201ENST00000378133 NYAP2Q9P242 653 aa18■□□□□ 0.47
PCDHA1-201ENST00000378133 NOC2LQ9Y3T9 749 aaKnown RBP18■□□□□ 0.47
PCDHA1-201ENST00000378133 KLRG2A4D1S0 409 aaPredicted RBP18■□□□□ 0.47
PCDHA1-201ENST00000378133 CCT8L1PA6NM43 557 aa18■□□□□ 0.47
PCDHA1-201ENST00000378133 BHMG1C9JSJ3 638 aaPredicted RBP18■□□□□ 0.47
PCDHA1-201ENST00000378133 F5H6K3 240 aa18■□□□□ 0.47
PCDHA1-201ENST00000378133 TBX3O15119 743 aa18■□□□□ 0.47
PCDHA1-201ENST00000378133 MSH4O15457 936 aa18■□□□□ 0.47
PCDHA1-201ENST00000378133 PPP1R12BO60237 982 aaPredicted RBP18■□□□□ 0.47
PCDHA1-201ENST00000378133 POLD1P28340 1107 aa18■□□□□ 0.47
PCDHA1-201ENST00000378133 KLRC3Q07444 240 aa18■□□□□ 0.47
PCDHA1-201ENST00000378133 SLC30A10Q6XR72 485 aa18■□□□□ 0.47
PCDHA1-201ENST00000378133 CCDC197Q8NCU1 140 aa18■□□□□ 0.47
PCDHA1-201ENST00000378133 CNOT10Q9H9A5 744 aaKnown RBP18■□□□□ 0.47
PCDHA1-201ENST00000378133 NOD2Q9HC29 1040 aa18■□□□□ 0.47
PCDHA1-201ENST00000378133 C10orf71Q711Q0 1435 aa17.99■□□□□ 0.47
PCDHA1-201ENST00000378133 CCDC188H7C350 402 aa17.99■□□□□ 0.47
PCDHA1-201ENST00000378133 CTNND1O60716 968 aaKnown RBP17.99■□□□□ 0.47
PCDHA1-201ENST00000378133 NEBLO76041 1014 aa17.99■□□□□ 0.47
PCDHA1-201ENST00000378133 PRKCIP41743 596 aa17.99■□□□□ 0.47
PCDHA1-201ENST00000378133 FBXO11Q86XK2 927 aa17.99■□□□□ 0.47
PCDHA1-201ENST00000378133 XPO6Q96QU8 1125 aaKnown RBP17.99■□□□□ 0.47
PCDHA1-201ENST00000378133 GREB1LQ9C091 1923 aaPredicted RBP17.99■□□□□ 0.47
PCDHA1-201ENST00000378133 EML1O00423 815 aa17.99■□□□□ 0.47
PCDHA1-201ENST00000378133 ITGA4P13612 1032 aa17.99■□□□□ 0.47
PCDHA1-201ENST00000378133 RPL13P26373 211 aaKnown RBP17.99■□□□□ 0.47
PCDHA1-201ENST00000378133 ERMARDQ5T6L9 678 aa17.99■□□□□ 0.47
PCDHA1-201ENST00000378133 PEX26Q7Z412 305 aa17.99■□□□□ 0.47
PCDHA1-201ENST00000378133 ANKS4BQ8N8V4 417 aa17.99■□□□□ 0.47
PCDHA1-201ENST00000378133 CCDC26Q8TAB7 109 aa17.99■□□□□ 0.47
PCDHA1-201ENST00000378133 PIGOQ8TEQ8 1089 aa17.99■□□□□ 0.47
PCDHA1-201ENST00000378133 FAXDC2Q96IV6 333 aa17.99■□□□□ 0.47
PCDHA1-201ENST00000378133 METTL14Q9HCE5 456 aaKnown RBP17.99■□□□□ 0.47
PCDHA1-201ENST00000378133 LRRC4CQ9HCJ2 640 aa17.99■□□□□ 0.47
PCDHA1-201ENST00000378133 F8VZ95 297 aa17.98■□□□□ 0.47
PCDHA1-201ENST00000378133 DDX3XO00571 662 aaKnown RBP eCLIP17.98■□□□□ 0.47
PCDHA1-201ENST00000378133 TBCAO75347 108 aaKnown RBP17.98■□□□□ 0.47
PCDHA1-201ENST00000378133 GDF11O95390 407 aa17.98■□□□□ 0.47
PCDHA1-201ENST00000378133 H2AFZP0C0S5 128 aa17.98■□□□□ 0.47
PCDHA1-201ENST00000378133 SREBF1P36956 1147 aa17.98■□□□□ 0.47
PCDHA1-201ENST00000378133 ICA1Q05084 483 aa17.98■□□□□ 0.47
PCDHA1-201ENST00000378133 NAA25Q14CX7 972 aa17.98■□□□□ 0.47
PCDHA1-201ENST00000378133 H2AFVQ71UI9 128 aa17.98■□□□□ 0.47
PCDHA1-201ENST00000378133 KIAA0825Q8IV33 1275 aa17.98■□□□□ 0.47
PCDHA1-201ENST00000378133 KIRREL3Q8IZU9 778 aa17.98■□□□□ 0.47
PCDHA1-201ENST00000378133 FAM20AQ96MK3 541 aa17.98■□□□□ 0.47
PCDHA1-201ENST00000378133 EIF2AK1Q9BQI3 630 aaKnown RBP17.98■□□□□ 0.47
PCDHA1-201ENST00000378133 FAM170AA1A519 330 aa17.98■□□□□ 0.47
PCDHA1-201ENST00000378133 TTI1O43156 1089 aa17.98■□□□□ 0.47
PCDHA1-201ENST00000378133 GFPT2O94808 682 aa17.98■□□□□ 0.47
PCDHA1-201ENST00000378133 ZNF76P36508 570 aa17.98■□□□□ 0.47
PCDHA1-201ENST00000378133 RBM5P52756 815 aaKnown RBP eCLIP17.98■□□□□ 0.47
PCDHA1-201ENST00000378133 JAM2P57087 298 aa17.98■□□□□ 0.47
PCDHA1-201ENST00000378133 BIRC2Q13490 618 aa17.98■□□□□ 0.47
PCDHA1-201ENST00000378133 U2AF1L4Q8WU68 220 aaKnown RBP17.98■□□□□ 0.47
PCDHA1-201ENST00000378133 DPH5Q9H2P9 285 aa17.98■□□□□ 0.47
PCDHA1-201ENST00000378133 PI4KBQ9UBF8 816 aa17.98■□□□□ 0.47
PCDHA1-201ENST00000378133 RABGAP1Q9Y3P9 1069 aa17.98■□□□□ 0.47
PCDHA1-201ENST00000378133 RGPD3A6NKT7 1758 aaPredicted RBP17.97■□□□□ 0.47
PCDHA1-201ENST00000378133 RGPD4Q7Z3J3 1758 aa17.97■□□□□ 0.47
PCDHA1-201ENST00000378133 LTBP1Q14766 1721 aa17.97■□□□□ 0.47
PCDHA1-201ENST00000378133 SF3A3Q12874 501 aaKnown RBP eCLIP17.97■□□□□ 0.47
PCDHA1-201ENST00000378133 DAAM2Q86T65 1068 aa17.97■□□□□ 0.47
PCDHA1-201ENST00000378133 VPS36Q86VN1 386 aa17.97■□□□□ 0.47
PCDHA1-201ENST00000378133 COL23A1Q86Y22 540 aaPredicted RBP17.97■□□□□ 0.47
PCDHA1-201ENST00000378133 CENPTQ96BT3 561 aa17.97■□□□□ 0.47
PCDHA1-201ENST00000378133 RSRC1Q96IZ7 334 aaKnown RBP17.97■□□□□ 0.47
PCDHA1-201ENST00000378133 FAM129AQ9BZQ8 928 aa17.97■□□□□ 0.47
PCDHA1-201ENST00000378133 DBNDD1Q9H9R9 158 aa17.97■□□□□ 0.47
PCDHA1-201ENST00000378133 VAV3Q9UKW4 847 aa17.97■□□□□ 0.47
PCDHA1-201ENST00000378133 ATP8A1Q9Y2Q0 1164 aa17.97■□□□□ 0.47
PCDHA1-201ENST00000378133 UTP11Q9Y3A2 253 aaKnown RBP17.97■□□□□ 0.47
PCDHA1-201ENST00000378133 SH3BP1Q9Y3L3 701 aa17.97■□□□□ 0.47
PCDHA1-201ENST00000378133 TGFB1I1O43294 461 aa17.97■□□□□ 0.47
PCDHA1-201ENST00000378133 ZBTB48P10074 688 aaPredicted RBP17.97■□□□□ 0.47
PCDHA1-201ENST00000378133 CTTNQ14247 550 aaKnown RBP17.97■□□□□ 0.47
PCDHA1-201ENST00000378133 BMT2Q1RMZ1 405 aa17.97■□□□□ 0.47
PCDHA1-201ENST00000378133 ACCSLQ4AC99 568 aa17.97■□□□□ 0.47
PCDHA1-201ENST00000378133 SH3BP5LQ7L8J4 393 aa17.97■□□□□ 0.47
PCDHA1-201ENST00000378133 FMNL3Q8IVF7 1028 aa17.97■□□□□ 0.47
PCDHA1-201ENST00000378133 TLCD1Q96CP7 247 aa17.97■□□□□ 0.47
PCDHA1-201ENST00000378133 CELF4Q9BZC1 486 aaKnown RBP17.97■□□□□ 0.47
PCDHA1-201ENST00000378133 SLITRK6Q9H5Y7 841 aa17.97■□□□□ 0.47
PCDHA1-201ENST00000378133 PNMA2Q9UL42 364 aa17.97■□□□□ 0.47
PCDHA1-201ENST00000378133 ZBTB39O15060 712 aa17.96■□□□□ 0.47
PCDHA1-201ENST00000378133 BUB1BO60566 1050 aaPredicted RBP17.96■□□□□ 0.47
PCDHA1-201ENST00000378133 NMT1P30419 496 aaKnown RBP17.96■□□□□ 0.47
PCDHA1-201ENST00000378133 EIF3BP55884 814 aaKnown RBP17.96■□□□□ 0.47
PCDHA1-201ENST00000378133 ZC2HC1CQ53FD0 456 aaPredicted RBP17.96■□□□□ 0.47
PCDHA1-201ENST00000378133 RINT1Q6NUQ1 792 aa17.96■□□□□ 0.47
PCDHA1-201ENST00000378133 KSR1Q8IVT5 923 aa17.96■□□□□ 0.47
PCDHA1-201ENST00000378133 CCDC63Q8NA47 563 aa17.96■□□□□ 0.47
PCDHA1-201ENST00000378133 TCP11Q8WWU5 503 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms