RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 PPP2R5CQ13362 524 aa16.55■□□□□ 0.24
HDAC6-204ENST00000376643 GIT2Q14161 759 aa16.55■□□□□ 0.24
HDAC6-204ENST00000376643 SMC1AQ14683 1233 aaKnown RBP16.55■□□□□ 0.24
HDAC6-204ENST00000376643 UGCGQ16739 394 aa16.55■□□□□ 0.24
HDAC6-204ENST00000376643 PPP4R3AQ6IN85 833 aa16.55■□□□□ 0.24
HDAC6-204ENST00000376643 B3GNT9Q6UX72 402 aa16.55■□□□□ 0.24
HDAC6-204ENST00000376643 TMEM184AQ6ZMB5 413 aa16.55■□□□□ 0.24
HDAC6-204ENST00000376643 RNF135Q8IUD6 432 aa16.55■□□□□ 0.24
HDAC6-204ENST00000376643 TMEM87AQ8NBN3 555 aa16.55■□□□□ 0.24
HDAC6-204ENST00000376643 CASP10Q92851 521 aa16.55■□□□□ 0.24
HDAC6-204ENST00000376643 BARX2Q9UMQ3 279 aaPredicted RBP16.55■□□□□ 0.24
HDAC6-204ENST00000376643 USP15Q9Y4E8 981 aaPredicted RBP16.55■□□□□ 0.24
HDAC6-204ENST00000376643 IGKV6-21A0A0C4DH24 114 aa16.54■□□□□ 0.24
HDAC6-204ENST00000376643 DDX11L8A8MPP1 907 aa16.54■□□□□ 0.24
HDAC6-204ENST00000376643 MAFO75444 373 aaPredicted RBP16.54■□□□□ 0.24
HDAC6-204ENST00000376643 RFC5P40937 340 aa16.54■□□□□ 0.24
HDAC6-204ENST00000376643 ANAPC15P60006 121 aa16.54■□□□□ 0.24
HDAC6-204ENST00000376643 STK3Q13188 491 aa16.54■□□□□ 0.24
HDAC6-204ENST00000376643 INF2Q27J81 1249 aa16.54■□□□□ 0.24
HDAC6-204ENST00000376643 LETM2Q2VYF4 491 aa16.54■□□□□ 0.24
HDAC6-204ENST00000376643 TPRNQ4KMQ1 711 aa16.54■□□□□ 0.24
HDAC6-204ENST00000376643 PLPP4Q5VZY2 271 aa16.54■□□□□ 0.24
HDAC6-204ENST00000376643 TWF2Q6IBS0 349 aaKnown RBP16.54■□□□□ 0.24
HDAC6-204ENST00000376643 GLB1LQ6UWU2 654 aa16.54■□□□□ 0.24
HDAC6-204ENST00000376643 OTUD6AQ7L8S5 288 aa16.54■□□□□ 0.24
HDAC6-204ENST00000376643 TMC7Q7Z402 723 aa16.54■□□□□ 0.24
HDAC6-204ENST00000376643 SLFN12Q8IYM2 578 aa16.54■□□□□ 0.24
HDAC6-204ENST00000376643 PGBD4Q96DM1 585 aa16.54■□□□□ 0.24
HDAC6-204ENST00000376643 TMEM169Q96HH4 297 aa16.54■□□□□ 0.24
HDAC6-204ENST00000376643 SUCLA2Q9P2R7 463 aaPredicted RBP16.54■□□□□ 0.24
HDAC6-204ENST00000376643 ATG2AQ2TAZ0 1938 aa16.54■□□□□ 0.24
HDAC6-204ENST00000376643 LOC730098B7Z3J9 87 aa16.53■□□□□ 0.24
HDAC6-204ENST00000376643 BAG4O95429 457 aaKnown RBP16.53■□□□□ 0.24
HDAC6-204ENST00000376643 GLP2RO95838 553 aa16.53■□□□□ 0.24
HDAC6-204ENST00000376643 P4HBP07237 508 aaKnown RBP16.53■□□□□ 0.24
HDAC6-204ENST00000376643 CBX2Q14781 532 aaPredicted RBP16.53■□□□□ 0.24
HDAC6-204ENST00000376643 PCBP1Q15365 356 aaKnown RBP eCLIP16.53■□□□□ 0.24
HDAC6-204ENST00000376643 CATSPER4Q7RTX7 472 aa16.53■□□□□ 0.24
HDAC6-204ENST00000376643 ZNF598Q86UK7 904 aaKnown RBP16.53■□□□□ 0.24
HDAC6-204ENST00000376643 RHPN2Q8IUC4 686 aa16.53■□□□□ 0.24
HDAC6-204ENST00000376643 TCP11Q8WWU5 503 aa16.53■□□□□ 0.24
HDAC6-204ENST00000376643 EDAQ92838 391 aa16.53■□□□□ 0.24
HDAC6-204ENST00000376643 NECTIN4Q96NY8 510 aa16.53■□□□□ 0.24
HDAC6-204ENST00000376643 PRRX2Q99811 253 aa16.53■□□□□ 0.24
HDAC6-204ENST00000376643 PHF20Q9BVI0 1012 aa16.53■□□□□ 0.24
HDAC6-204ENST00000376643 CYP26B1Q9NR63 512 aa16.53■□□□□ 0.24
HDAC6-204ENST00000376643 MUTYHQ9UIF7 546 aa16.53■□□□□ 0.24
HDAC6-204ENST00000376643 PIN4Q9Y237 131 aaKnown RBP16.53■□□□□ 0.24
HDAC6-204ENST00000376643 PER2O15055 1255 aa16.52■□□□□ 0.24
HDAC6-204ENST00000376643 ASAP2O43150 1006 aa16.52■□□□□ 0.24
HDAC6-204ENST00000376643 EDIL3O43854 480 aa16.52■□□□□ 0.24
HDAC6-204ENST00000376643 HOXD11P31277 338 aaPredicted RBP16.52■□□□□ 0.24
HDAC6-204ENST00000376643 PHKA2P46019 1235 aa16.52■□□□□ 0.24
HDAC6-204ENST00000376643 POLGP54098 1239 aaPredicted RBP16.52■□□□□ 0.24
HDAC6-204ENST00000376643 ERVFC1P60507 584 aa16.52■□□□□ 0.24
HDAC6-204ENST00000376643 CES5AQ6NT32 575 aa16.52■□□□□ 0.24
HDAC6-204ENST00000376643 ANKRD54Q6NXT1 300 aa16.52■□□□□ 0.24
HDAC6-204ENST00000376643 SRGAP1Q7Z6B7 1085 aa16.52■□□□□ 0.24
HDAC6-204ENST00000376643 SLC39A11Q8N1S5 342 aa16.52■□□□□ 0.24
HDAC6-204ENST00000376643 PSPC1Q8WXF1 523 aaKnown RBP16.52■□□□□ 0.24
HDAC6-204ENST00000376643 KCNMB3Q9NPA1 279 aa16.52■□□□□ 0.24
HDAC6-204ENST00000376643 RNF19AQ9NV58 838 aa16.52■□□□□ 0.24
HDAC6-204ENST00000376643 NR2E1Q9Y466 385 aa16.52■□□□□ 0.24
HDAC6-204ENST00000376643 PLXNA4Q9HCM2 1894 aa16.51■□□□□ 0.23
HDAC6-204ENST00000376643 A0A087WZ62 844 aa16.51■□□□□ 0.23
HDAC6-204ENST00000376643 CCNT1O60563 726 aaKnown RBP16.51■□□□□ 0.23
HDAC6-204ENST00000376643 ZNF623O75123 536 aa16.51■□□□□ 0.23
HDAC6-204ENST00000376643 TECP42680 631 aa16.51■□□□□ 0.23
HDAC6-204ENST00000376643 RNASELQ05823 741 aaKnown RBP16.51■□□□□ 0.23
HDAC6-204ENST00000376643 ITIH3Q06033 890 aa16.51■□□□□ 0.23
HDAC6-204ENST00000376643 NCBP1Q09161 790 aaKnown RBP16.51■□□□□ 0.23
HDAC6-204ENST00000376643 SCRN1Q12765 414 aa16.51■□□□□ 0.23
HDAC6-204ENST00000376643 NPY5RQ15761 445 aa16.51■□□□□ 0.23
HDAC6-204ENST00000376643 CLLU1OSQ5K130 101 aa16.51■□□□□ 0.23
HDAC6-204ENST00000376643 LRRC55Q6ZSA7 311 aa16.51■□□□□ 0.23
HDAC6-204ENST00000376643 BMP8AQ7Z5Y6 402 aa16.51■□□□□ 0.23
HDAC6-204ENST00000376643 C4orf19Q8IY42 314 aa16.51■□□□□ 0.23
HDAC6-204ENST00000376643 URGCPQ8TCY9 931 aa16.51■□□□□ 0.23
HDAC6-204ENST00000376643 HELQQ8TDG4 1101 aa16.51■□□□□ 0.23
HDAC6-204ENST00000376643 SUSD6Q92537 303 aa16.51■□□□□ 0.23
HDAC6-204ENST00000376643 CEP170P1Q96L14 293 aa16.51■□□□□ 0.23
HDAC6-204ENST00000376643 NLRP4Q96MN2 994 aa16.51■□□□□ 0.23
HDAC6-204ENST00000376643 FDXACB1Q9BRP7 624 aaPredicted RBP16.51■□□□□ 0.23
HDAC6-204ENST00000376643 FAM105AQ9NUU6 356 aa16.51■□□□□ 0.23
HDAC6-204ENST00000376643 KANSL3Q9P2N6 904 aa16.51■□□□□ 0.23
HDAC6-204ENST00000376643 COL4A3BPQ9Y5P4 624 aa16.51■□□□□ 0.23
HDAC6-204ENST00000376643 CNTNAP2Q9UHC6 1331 aa16.5■□□□□ 0.23
HDAC6-204ENST00000376643 PFKFB2O60825 505 aa16.5■□□□□ 0.23
HDAC6-204ENST00000376643 STBD1O95210 358 aa16.5■□□□□ 0.23
HDAC6-204ENST00000376643 EPHA7Q15375 998 aa16.5■□□□□ 0.23
HDAC6-204ENST00000376643 ANO5Q75V66 913 aa16.5■□□□□ 0.23
HDAC6-204ENST00000376643 SUGP1Q8IWZ8 645 aaKnown RBP16.5■□□□□ 0.23
HDAC6-204ENST00000376643 MRPL43Q8N983 215 aaKnown RBP16.5■□□□□ 0.23
HDAC6-204ENST00000376643 CNNM3Q8NE01 707 aa16.5■□□□□ 0.23
HDAC6-204ENST00000376643 GJA10Q969M2 543 aa16.5■□□□□ 0.23
HDAC6-204ENST00000376643 ZNF668Q96K58 619 aaPredicted RBP16.5■□□□□ 0.23
HDAC6-204ENST00000376643 CEP89Q96ST8 783 aa16.5■□□□□ 0.23
HDAC6-204ENST00000376643 ZSWIM4Q9H7M6 989 aa16.5■□□□□ 0.23
HDAC6-204ENST00000376643 UBN1Q9NPG3 1134 aa16.5■□□□□ 0.23
HDAC6-204ENST00000376643 DZANK1Q9NVP4 752 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms