RNA–Protein interactions for RNA: ENST00000376567.6

DDR1-224, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-224ENST00000376567 NR3C2P08235 984 aa13.41□□□□□ -0.26
DDR1-224ENST00000376567 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.41□□□□□ -0.26
DDR1-224ENST00000376567 C11orf70Q9BRQ4 267 aa13.41□□□□□ -0.26
DDR1-224ENST00000376567 TOPORSQ9NS56 1045 aaPredicted RBP13.41□□□□□ -0.26
DDR1-224ENST00000376567 HACL1Q9UJ83 578 aa13.41□□□□□ -0.26
DDR1-224ENST00000376567 SYNJ2BP-COX16A0A087WUM0 186 aa13.41□□□□□ -0.26
DDR1-224ENST00000376567 CSDE1O75534 798 aaKnown RBP13.41□□□□□ -0.26
DDR1-224ENST00000376567 CCND2P30279 289 aa13.41□□□□□ -0.26
DDR1-224ENST00000376567 MFAP3P55082 362 aa13.41□□□□□ -0.26
DDR1-224ENST00000376567 MIIPQ5JXC2 388 aa13.41□□□□□ -0.26
DDR1-224ENST00000376567 COX16Q9P0S2 106 aa13.41□□□□□ -0.26
DDR1-224ENST00000376567 MARF1Q9Y4F3 1742 aaKnown RBP13.41□□□□□ -0.26
DDR1-224ENST00000376567 PIK3R2O00459 728 aa13.4□□□□□ -0.26
DDR1-224ENST00000376567 TMEM191BP0C7N4 346 aa13.4□□□□□ -0.26
DDR1-224ENST00000376567 PON1P27169 355 aa13.4□□□□□ -0.26
DDR1-224ENST00000376567 ACTN2P35609 894 aa13.4□□□□□ -0.26
DDR1-224ENST00000376567 KCNJ1P48048 391 aa13.4□□□□□ -0.26
DDR1-224ENST00000376567 MNAT1P51948 309 aa13.4□□□□□ -0.26
DDR1-224ENST00000376567 KLHDC7AQ5VTJ3 777 aa13.4□□□□□ -0.26
DDR1-224ENST00000376567 TMEM270Q6UE05 265 aa13.4□□□□□ -0.26
DDR1-224ENST00000376567 DLK2Q6UY11 383 aa13.4□□□□□ -0.26
DDR1-224ENST00000376567 CBWD2Q8IUF1 395 aa13.4□□□□□ -0.26
DDR1-224ENST00000376567 IWS1Q96ST2 819 aa13.4□□□□□ -0.26
DDR1-224ENST00000376567 NAP1L3Q99457 506 aaPredicted RBP13.4□□□□□ -0.26
DDR1-224ENST00000376567 TMEM206Q9H813 350 aa13.4□□□□□ -0.26
DDR1-224ENST00000376567 ANAPC7Q9UJX3 599 aa13.4□□□□□ -0.26
DDR1-224ENST00000376567 NOVA2Q9UNW9 492 aaKnown RBP13.4□□□□□ -0.26
DDR1-224ENST00000376567 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.4□□□□□ -0.26
DDR1-224ENST00000376567 TAF1P21675 1872 aa13.4□□□□□ -0.26
DDR1-224ENST00000376567 FOXN3O00409 490 aaPredicted RBP13.4□□□□□ -0.26
DDR1-224ENST00000376567 SMARCA1P28370 1054 aa13.4□□□□□ -0.26
DDR1-224ENST00000376567 SREBF1P36956 1147 aa13.4□□□□□ -0.26
DDR1-224ENST00000376567 BRDTQ58F21 947 aaPredicted RBP13.4□□□□□ -0.26
DDR1-224ENST00000376567 IL31RAQ8NI17 732 aa13.4□□□□□ -0.26
DDR1-224ENST00000376567 DNAJC19Q96DA6 116 aa13.4□□□□□ -0.26
DDR1-224ENST00000376567 HSPBP1Q9NZL4 362 aa13.4□□□□□ -0.26
DDR1-224ENST00000376567 LRRC10BA6NIK2 292 aa13.4□□□□□ -0.26
DDR1-224ENST00000376567 ACSL3O95573 720 aa13.4□□□□□ -0.26
DDR1-224ENST00000376567 JAG1P78504 1218 aa13.4□□□□□ -0.26
DDR1-224ENST00000376567 GABPAQ06546 454 aa13.4□□□□□ -0.26
DDR1-224ENST00000376567 LIN9Q5TKA1 542 aa13.4□□□□□ -0.26
DDR1-224ENST00000376567 DENND2CQ68D51 928 aa13.4□□□□□ -0.26
DDR1-224ENST00000376567 ZNF571Q7Z3V5 609 aaPredicted RBP13.4□□□□□ -0.26
DDR1-224ENST00000376567 RNF169Q8NCN4 708 aa13.4□□□□□ -0.26
DDR1-224ENST00000376567 IPO4Q8TEX9 1081 aaKnown RBP13.4□□□□□ -0.26
DDR1-224ENST00000376567 MXRA8Q9BRK3 442 aa13.4□□□□□ -0.26
DDR1-224ENST00000376567 MSTO1Q9BUK6 570 aa13.4□□□□□ -0.26
DDR1-224ENST00000376567 AGPAT3Q9NRZ7 376 aa13.4□□□□□ -0.26
DDR1-224ENST00000376567 NOC2LQ9Y3T9 749 aaKnown RBP13.4□□□□□ -0.26
DDR1-224ENST00000376567 ANO9A1A5B4 782 aa13.39□□□□□ -0.27
DDR1-224ENST00000376567 TTI1O43156 1089 aa13.39□□□□□ -0.27
DDR1-224ENST00000376567 SLITRK3O94933 977 aa13.39□□□□□ -0.27
DDR1-224ENST00000376567 KIF4AO95239 1232 aa13.39□□□□□ -0.27
DDR1-224ENST00000376567 BSPRYQ5W0U4 402 aa13.39□□□□□ -0.27
DDR1-224ENST00000376567 SLC35G2Q8TBE7 412 aa13.39□□□□□ -0.27
DDR1-224ENST00000376567 MED4Q9NPJ6 270 aa13.39□□□□□ -0.27
DDR1-224ENST00000376567 ZNF148Q9UQR1 794 aa13.39□□□□□ -0.27
DDR1-224ENST00000376567 SART1O43290 800 aaKnown RBP13.39□□□□□ -0.27
DDR1-224ENST00000376567 NT5C2P49902 561 aa13.39□□□□□ -0.27
DDR1-224ENST00000376567 MUM1L1Q5H9M0 696 aa13.39□□□□□ -0.27
DDR1-224ENST00000376567 INTS8Q75QN2 995 aaKnown RBP13.39□□□□□ -0.27
DDR1-224ENST00000376567 ZNF507Q8TCN5 953 aa13.39□□□□□ -0.27
DDR1-224ENST00000376567 C1orf54Q8WWF1 131 aa13.39□□□□□ -0.27
DDR1-224ENST00000376567 CPA5Q8WXQ8 436 aa13.39□□□□□ -0.27
DDR1-224ENST00000376567 PLCD4Q9BRC7 762 aa13.39□□□□□ -0.27
DDR1-224ENST00000376567 CNOT8Q9UFF9 292 aaKnown RBP13.39□□□□□ -0.27
DDR1-224ENST00000376567 PLAAQ9Y263 795 aa13.39□□□□□ -0.27
DDR1-224ENST00000376567 YDJCA8MPS7 323 aa13.39□□□□□ -0.27
DDR1-224ENST00000376567 SOX5P35711 763 aa13.39□□□□□ -0.27
DDR1-224ENST00000376567 SMAD1Q15797 465 aaKnown RBP13.39□□□□□ -0.27
DDR1-224ENST00000376567 BEND6Q5SZJ8 279 aaPredicted RBP13.39□□□□□ -0.27
DDR1-224ENST00000376567 SYCP2LQ5T4T6 812 aa13.39□□□□□ -0.27
DDR1-224ENST00000376567 STYK1Q6J9G0 422 aa13.39□□□□□ -0.27
DDR1-224ENST00000376567 FRMD5Q7Z6J6 570 aa13.39□□□□□ -0.27
DDR1-224ENST00000376567 NSUN6Q8TEA1 469 aaKnown RBP13.39□□□□□ -0.27
DDR1-224ENST00000376567 PPP1R13LQ8WUF5 828 aa13.39□□□□□ -0.27
DDR1-224ENST00000376567 SPIRE2Q8WWL2 714 aa13.39□□□□□ -0.27
DDR1-224ENST00000376567 RNF25Q96BH1 459 aaPredicted RBP13.39□□□□□ -0.27
DDR1-224ENST00000376567 THOC1Q96FV9 657 aaKnown RBP13.39□□□□□ -0.27
DDR1-224ENST00000376567 WDR18Q9BV38 432 aa13.39□□□□□ -0.27
DDR1-224ENST00000376567 POLR3FQ9H1D9 316 aaPredicted RBP13.39□□□□□ -0.27
DDR1-224ENST00000376567 TTC7AQ9ULT0 858 aaPredicted RBP13.39□□□□□ -0.27
DDR1-224ENST00000376567 AKT3Q9Y243 479 aa13.39□□□□□ -0.27
DDR1-224ENST00000376567 TMX2Q9Y320 296 aa13.39□□□□□ -0.27
DDR1-224ENST00000376567 ASTN2O75129 1339 aaPredicted RBP13.39□□□□□ -0.27
DDR1-224ENST00000376567 ZNF233A6NK53 670 aa13.38□□□□□ -0.27
DDR1-224ENST00000376567 RGS16O15492 202 aaPredicted RBP13.38□□□□□ -0.27
DDR1-224ENST00000376567 DKC1O60832 514 aaKnown RBP eCLIP13.38□□□□□ -0.27
DDR1-224ENST00000376567 ORC2Q13416 577 aaPredicted RBP13.38□□□□□ -0.27
DDR1-224ENST00000376567 ZKSCAN8Q15776 578 aaPredicted RBP13.38□□□□□ -0.27
DDR1-224ENST00000376567 TRAPPC11Q7Z392 1133 aa13.38□□□□□ -0.27
DDR1-224ENST00000376567 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.38□□□□□ -0.27
DDR1-224ENST00000376567 DHX38Q92620 1227 aaKnown RBP13.38□□□□□ -0.27
DDR1-224ENST00000376567 KAT5Q92993 513 aa13.38□□□□□ -0.27
DDR1-224ENST00000376567 MPHOSPH6Q99547 160 aaKnown RBP13.38□□□□□ -0.27
DDR1-224ENST00000376567 TRIM6Q9C030 488 aaPredicted RBP13.38□□□□□ -0.27
DDR1-224ENST00000376567 NAGPAQ9UK23 515 aa13.38□□□□□ -0.27
DDR1-224ENST00000376567 PARP4Q9UKK3 1724 aaKnown RBP13.38□□□□□ -0.27
DDR1-224ENST00000376567 PSAPP07602 524 aa13.38□□□□□ -0.27
DDR1-224ENST00000376567 PSMC5P62195 406 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms