RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 CDK17Q00537 523 aa15.51■□□□□ 0.07
TNFRSF1B-201ENST00000376259 SEPT14Q6ZU15 432 aa15.51■□□□□ 0.07
TNFRSF1B-201ENST00000376259 ACER1Q8TDN7 264 aa15.51■□□□□ 0.07
TNFRSF1B-201ENST00000376259 GOLGA8SH3BPF8 625 aa15.5■□□□□ 0.07
TNFRSF1B-201ENST00000376259 GOLGA8MH3BSY2 632 aa15.5■□□□□ 0.07
TNFRSF1B-201ENST00000376259 HNRNPDLO14979 420 aaKnown RBP15.5■□□□□ 0.07
TNFRSF1B-201ENST00000376259 HIP1RO75146 1068 aa15.5■□□□□ 0.07
TNFRSF1B-201ENST00000376259 MMP10P09238 476 aa15.5■□□□□ 0.07
TNFRSF1B-201ENST00000376259 PADI6Q6TGC4 694 aa15.5■□□□□ 0.07
TNFRSF1B-201ENST00000376259 CCDC13Q8IYE1 715 aa15.5■□□□□ 0.07
TNFRSF1B-201ENST00000376259 RBM46Q8TBY0 533 aaKnown RBP15.5■□□□□ 0.07
TNFRSF1B-201ENST00000376259 KCNV2Q8TDN2 545 aa15.5■□□□□ 0.07
TNFRSF1B-201ENST00000376259 RFFLQ8WZ73 363 aa15.5■□□□□ 0.07
TNFRSF1B-201ENST00000376259 TEKT3Q9BXF9 490 aa15.5■□□□□ 0.07
TNFRSF1B-201ENST00000376259 ANAPC7Q9UJX3 599 aa15.5■□□□□ 0.07
TNFRSF1B-201ENST00000376259 POTEJP0CG39 1038 aa15.5■□□□□ 0.07
TNFRSF1B-201ENST00000376259 SHMT1P34896 483 aa15.5■□□□□ 0.07
TNFRSF1B-201ENST00000376259 IFI35P80217 286 aaPredicted RBP15.5■□□□□ 0.07
TNFRSF1B-201ENST00000376259 ZNF844Q08AG5 666 aa15.5■□□□□ 0.07
TNFRSF1B-201ENST00000376259 DAB2IPQ5VWQ8 1189 aa15.5■□□□□ 0.07
TNFRSF1B-201ENST00000376259 PPP4R3AQ6IN85 833 aa15.5■□□□□ 0.07
TNFRSF1B-201ENST00000376259 RINT1Q6NUQ1 792 aa15.5■□□□□ 0.07
TNFRSF1B-201ENST00000376259 C9orf72Q96LT7 481 aa15.5■□□□□ 0.07
TNFRSF1B-201ENST00000376259 SEMA4AQ9H3S1 761 aa15.5■□□□□ 0.07
TNFRSF1B-201ENST00000376259 ANKFY1Q9P2R3 1169 aa15.5■□□□□ 0.07
TNFRSF1B-201ENST00000376259 SHBGP04278 402 aa15.5■□□□□ 0.07
TNFRSF1B-201ENST00000376259 FECHP22830 423 aa15.5■□□□□ 0.07
TNFRSF1B-201ENST00000376259 MAPK4P31152 587 aa15.5■□□□□ 0.07
TNFRSF1B-201ENST00000376259 NPEPPSP55786 919 aa15.5■□□□□ 0.07
TNFRSF1B-201ENST00000376259 ARSHQ5FYA8 562 aa15.5■□□□□ 0.07
TNFRSF1B-201ENST00000376259 FRMD5Q7Z6J6 570 aa15.5■□□□□ 0.07
TNFRSF1B-201ENST00000376259 PALB2Q86YC2 1186 aa15.5■□□□□ 0.07
TNFRSF1B-201ENST00000376259 MYCBPQ99417 103 aaPredicted RBP15.5■□□□□ 0.07
TNFRSF1B-201ENST00000376259 hCG_1984214I3L0E3 225 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 PDXKO00764 312 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 PRLRP16471 622 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 ZBTB16Q05516 673 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 TMED2Q15363 201 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 AOC3Q16853 763 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 CBWD6Q4V339 395 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 CBWD3Q5JTY5 395 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 CBWD5Q5RIA9 395 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 PPP4R3CPQ6ZMV5 832 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 ZNF713Q8N859 430 aaPredicted RBP15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 SUPT20HQ8NEM7 779 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 MICAL1Q8TDZ2 1067 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 KRT35Q92764 455 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 RNF25Q96BH1 459 aaPredicted RBP15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 EDEM3Q9BZQ6 932 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 NWD2Q9ULI1 1742 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 FOSP01100 380 aaPredicted RBP15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 COMTP21964 271 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 SOX10P56693 466 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 ZNF449Q6P9G9 518 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 JAMLQ86YT9 394 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 CERS5Q8N5B7 392 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 SLC35C1Q96A29 364 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 INPP4AQ96PE3 977 aaPredicted RBP15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 NACC1Q96RE7 527 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 CBWD1Q9BRT8 395 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 NUP85Q9BW27 656 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 COA1Q9GZY4 146 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 SYNCQ9H7C4 482 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 AJAP1Q9UKB5 411 aaPredicted RBP15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 ESYT2A0FGR8 921 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 PI4K2BG5E9Z4 385 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 IPO5O00410 1097 aaKnown RBP15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 FAM107AO95990 144 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 RPA1P27694 616 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 PDE6CP51160 858 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 QPCTQ16769 361 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 INTS8Q75QN2 995 aaKnown RBP15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 KLHL29Q96CT2 875 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 ZNF148Q9UQR1 794 aa15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 ZBTB12Q9Y330 459 aaPredicted RBP15.49■□□□□ 0.07
TNFRSF1B-201ENST00000376259 M0R2N6 131 aa15.48■□□□□ 0.07
TNFRSF1B-201ENST00000376259 SPAG7O75391 227 aa15.48■□□□□ 0.07
TNFRSF1B-201ENST00000376259 SMAD1Q15797 465 aaKnown RBP15.48■□□□□ 0.07
TNFRSF1B-201ENST00000376259 KIAA1755Q5JYT7 1200 aa15.48■□□□□ 0.07
TNFRSF1B-201ENST00000376259 PLA2G4FQ68DD2 849 aa15.48■□□□□ 0.07
TNFRSF1B-201ENST00000376259 CCDC77Q9BR77 488 aa15.48■□□□□ 0.07
TNFRSF1B-201ENST00000376259 CNOT8Q9UFF9 292 aaKnown RBP15.48■□□□□ 0.07
TNFRSF1B-201ENST00000376259 PRR12Q9ULL5 1215 aa15.48■□□□□ 0.07
TNFRSF1B-201ENST00000376259 H0Y3Z8 333 aa15.48■□□□□ 0.07
TNFRSF1B-201ENST00000376259 ECEL1O95672 775 aa15.48■□□□□ 0.07
TNFRSF1B-201ENST00000376259 TM4SF1P30408 202 aa15.48■□□□□ 0.07
TNFRSF1B-201ENST00000376259 CHRNA5P30532 468 aa15.48■□□□□ 0.07
TNFRSF1B-201ENST00000376259 TMEM119Q4V9L6 283 aa15.48■□□□□ 0.07
TNFRSF1B-201ENST00000376259 KDM7AQ6ZMT4 941 aa15.48■□□□□ 0.07
TNFRSF1B-201ENST00000376259 TAOK1Q7L7X3 1001 aa15.48■□□□□ 0.07
TNFRSF1B-201ENST00000376259 CHMP6Q96FZ7 201 aa15.48■□□□□ 0.07
TNFRSF1B-201ENST00000376259 SLC40A1Q9NP59 571 aa15.48■□□□□ 0.07
TNFRSF1B-201ENST00000376259 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.48■□□□□ 0.07
TNFRSF1B-201ENST00000376259 SPATA31A5Q5VU36 1347 aa15.48■□□□□ 0.07
TNFRSF1B-201ENST00000376259 SPATA31A7Q8IWB4 1347 aa15.48■□□□□ 0.07
TNFRSF1B-201ENST00000376259 OPLAHO14841 1288 aa15.48■□□□□ 0.07
TNFRSF1B-201ENST00000376259 ARP10275 920 aa15.48■□□□□ 0.07
TNFRSF1B-201ENST00000376259 CDC25CP30307 473 aa15.48■□□□□ 0.07
TNFRSF1B-201ENST00000376259 SMTNP53814 917 aa15.48■□□□□ 0.07
TNFRSF1B-201ENST00000376259 MYO1EQ12965 1108 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms