RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 PGK1P00558 417 aa11.53□□□□□ -0.56
PDPN-203ENST00000376061 MYL3P08590 195 aa11.53□□□□□ -0.56
PDPN-203ENST00000376061 C6orf222P0C671 652 aaPredicted RBP11.53□□□□□ -0.56
PDPN-203ENST00000376061 INSRRP14616 1297 aa11.53□□□□□ -0.56
PDPN-203ENST00000376061 GLRA2P23416 452 aa11.53□□□□□ -0.56
PDPN-203ENST00000376061 DEKP35659 375 aaKnown RBP11.53□□□□□ -0.56
PDPN-203ENST00000376061 NPTX2P47972 431 aa11.53□□□□□ -0.56
PDPN-203ENST00000376061 NKX3-2P78367 333 aa11.53□□□□□ -0.56
PDPN-203ENST00000376061 KCNA1Q09470 495 aa11.53□□□□□ -0.56
PDPN-203ENST00000376061 PPFIA1Q13136 1202 aa11.53□□□□□ -0.56
PDPN-203ENST00000376061 DRP2Q13474 957 aa11.53□□□□□ -0.56
PDPN-203ENST00000376061 ALCAMQ13740 583 aa11.53□□□□□ -0.56
PDPN-203ENST00000376061 MFSD10Q14728 455 aa11.53□□□□□ -0.56
PDPN-203ENST00000376061 TPD52L1Q16890 204 aaPredicted RBP11.53□□□□□ -0.56
PDPN-203ENST00000376061 KNOP1Q1ED39 458 aaKnown RBP11.53□□□□□ -0.56
PDPN-203ENST00000376061 HSP90AA4PQ58FG1 418 aa11.53□□□□□ -0.56
PDPN-203ENST00000376061 STXBP4Q6ZWJ1 553 aa11.53□□□□□ -0.56
PDPN-203ENST00000376061 LRRC71Q8N4P6 559 aa11.53□□□□□ -0.56
PDPN-203ENST00000376061 DNAJC5GQ8N7S2 189 aa11.53□□□□□ -0.56
PDPN-203ENST00000376061 ASAP3Q8TDY4 903 aa11.53□□□□□ -0.56
PDPN-203ENST00000376061 ZBTB10Q96DT7 871 aa11.53□□□□□ -0.56
PDPN-203ENST00000376061 TSG101Q99816 390 aa11.53□□□□□ -0.56
PDPN-203ENST00000376061 KIFC3Q9BVG8 833 aa11.53□□□□□ -0.56
PDPN-203ENST00000376061 ST6GALNAC4Q9H4F1 302 aa11.53□□□□□ -0.56
PDPN-203ENST00000376061 XPNPEP3Q9NQH7 507 aa11.53□□□□□ -0.56
PDPN-203ENST00000376061 SAMSN1Q9NSI8 373 aaKnown RBP11.53□□□□□ -0.56
PDPN-203ENST00000376061 TRIP12Q14669 1992 aaPredicted RBP11.52□□□□□ -0.57
PDPN-203ENST00000376061 CCDC169A6NNP5 214 aa11.52□□□□□ -0.57
PDPN-203ENST00000376061 HAS3O00219 553 aa11.52□□□□□ -0.57
PDPN-203ENST00000376061 GRK4P32298 578 aa11.52□□□□□ -0.57
PDPN-203ENST00000376061 PSEN2P49810 448 aa11.52□□□□□ -0.57
PDPN-203ENST00000376061 IGBP1P78318 339 aa11.52□□□□□ -0.57
PDPN-203ENST00000376061 PURAQ00577 322 aaKnown RBP11.52□□□□□ -0.57
PDPN-203ENST00000376061 GRIK4Q16099 956 aa11.52□□□□□ -0.57
PDPN-203ENST00000376061 KIAA0753Q2KHM9 967 aa11.52□□□□□ -0.57
PDPN-203ENST00000376061 LRRC55Q6ZSA7 311 aa11.52□□□□□ -0.57
PDPN-203ENST00000376061 HAUS6Q7Z4H7 955 aa11.52□□□□□ -0.57
PDPN-203ENST00000376061 KSR1Q8IVT5 923 aa11.52□□□□□ -0.57
PDPN-203ENST00000376061 EXOC8Q8IYI6 725 aa11.52□□□□□ -0.57
PDPN-203ENST00000376061 CSGALNACT2Q8N6G5 542 aa11.52□□□□□ -0.57
PDPN-203ENST00000376061 LINC01465Q8N7H1 131 aa11.52□□□□□ -0.57
PDPN-203ENST00000376061 SLC17A8Q8NDX2 589 aa11.52□□□□□ -0.57
PDPN-203ENST00000376061 TMEM161BQ8NDZ6 487 aa11.52□□□□□ -0.57
PDPN-203ENST00000376061 HVCN1Q96D96 273 aa11.52□□□□□ -0.57
PDPN-203ENST00000376061 IFT74Q96LB3 600 aa11.52□□□□□ -0.57
PDPN-203ENST00000376061 JPH2Q9BR39 696 aaPredicted RBP11.52□□□□□ -0.57
PDPN-203ENST00000376061 IKZF4Q9H2S9 585 aa11.52□□□□□ -0.57
PDPN-203ENST00000376061 THAP9Q9H5L6 903 aa11.52□□□□□ -0.57
PDPN-203ENST00000376061 KMT5AQ9NQR1 393 aa11.52□□□□□ -0.57
PDPN-203ENST00000376061 DDX20Q9UHI6 824 aaKnown RBP11.52□□□□□ -0.57
PDPN-203ENST00000376061 KPNA6O60684 536 aa11.51□□□□□ -0.57
PDPN-203ENST00000376061 ADCY5O95622 1261 aa11.51□□□□□ -0.57
PDPN-203ENST00000376061 SMIM10L2AP0DMW4 78 aa11.51□□□□□ -0.57
PDPN-203ENST00000376061 SMIM10L2BP0DMW5 78 aa11.51□□□□□ -0.57
PDPN-203ENST00000376061 NAMPTP43490 491 aa11.51□□□□□ -0.57
PDPN-203ENST00000376061 CLCN3P51790 818 aa11.51□□□□□ -0.57
PDPN-203ENST00000376061 ZNF75DP51815 510 aa11.51□□□□□ -0.57
PDPN-203ENST00000376061 GTF2BQ00403 316 aa11.51□□□□□ -0.57
PDPN-203ENST00000376061 FANCCQ00597 558 aa11.51□□□□□ -0.57
PDPN-203ENST00000376061 CAPSQ13938 189 aa11.51□□□□□ -0.57
PDPN-203ENST00000376061 PPP2R5AQ15172 486 aa11.51□□□□□ -0.57
PDPN-203ENST00000376061 EDRF1Q3B7T1 1238 aa11.51□□□□□ -0.57
PDPN-203ENST00000376061 GNASQ5JWF2 1037 aa11.51□□□□□ -0.57
PDPN-203ENST00000376061 MARCH8Q5T0T0 291 aa11.51□□□□□ -0.57
PDPN-203ENST00000376061 IER5Q5VY09 327 aa11.51□□□□□ -0.57
PDPN-203ENST00000376061 APTXQ7Z2E3 356 aaKnown RBP11.51□□□□□ -0.57
PDPN-203ENST00000376061 IRF2BP1Q8IU81 584 aa11.51□□□□□ -0.57
PDPN-203ENST00000376061 ZC3H3Q8IXZ2 948 aaKnown RBP11.51□□□□□ -0.57
PDPN-203ENST00000376061 NOC3LQ8WTT2 800 aaKnown RBP11.51□□□□□ -0.57
PDPN-203ENST00000376061 LMBR1Q8WVP7 490 aa11.51□□□□□ -0.57
PDPN-203ENST00000376061 TCP11Q8WWU5 503 aa11.51□□□□□ -0.57
PDPN-203ENST00000376061 PSPC1Q8WXF1 523 aaKnown RBP11.51□□□□□ -0.57
PDPN-203ENST00000376061 NTPCRQ9BSD7 190 aaKnown RBP11.51□□□□□ -0.57
PDPN-203ENST00000376061 KATNAL1Q9BW62 490 aa11.51□□□□□ -0.57
PDPN-203ENST00000376061 SRRTQ9BXP5 876 aaKnown RBP11.51□□□□□ -0.57
PDPN-203ENST00000376061 SPC25Q9HBM1 224 aa11.51□□□□□ -0.57
PDPN-203ENST00000376061 TYW1Q9NV66 732 aaKnown RBP11.51□□□□□ -0.57
PDPN-203ENST00000376061 ARHGAP28Q9P2N2 729 aa11.51□□□□□ -0.57
PDPN-203ENST00000376061 TRAF3IP3Q9Y228 551 aa11.51□□□□□ -0.57
PDPN-203ENST00000376061 PCDHB13Q9Y5F0 798 aa11.51□□□□□ -0.57
PDPN-203ENST00000376061 DENND3A2RUS2 1198 aa11.5□□□□□ -0.57
PDPN-203ENST00000376061 LRRIQ4A6NIV6 560 aa11.5□□□□□ -0.57
PDPN-203ENST00000376061 KCNJ18B7U540 433 aa11.5□□□□□ -0.57
PDPN-203ENST00000376061 PDXKO00764 312 aa11.5□□□□□ -0.57
PDPN-203ENST00000376061 MAGEB2O15479 319 aa11.5□□□□□ -0.57
PDPN-203ENST00000376061 TGFB1I1O43294 461 aa11.5□□□□□ -0.57
PDPN-203ENST00000376061 KLRC1P26715 233 aa11.5□□□□□ -0.57
PDPN-203ENST00000376061 CST5P28325 142 aaPredicted RBP11.5□□□□□ -0.57
PDPN-203ENST00000376061 SMTNP53814 917 aa11.5□□□□□ -0.57
PDPN-203ENST00000376061 CHMP4BP1P59074 171 aa11.5□□□□□ -0.57
PDPN-203ENST00000376061 KCNJ12Q14500 433 aa11.5□□□□□ -0.57
PDPN-203ENST00000376061 EFCAB12Q6NXP0 572 aa11.5□□□□□ -0.57
PDPN-203ENST00000376061 MTHFD1LQ6UB35 978 aa11.5□□□□□ -0.57
PDPN-203ENST00000376061 MAP4K3Q8IVH8 894 aa11.5□□□□□ -0.57
PDPN-203ENST00000376061 RETREG2Q8NC44 543 aa11.5□□□□□ -0.57
PDPN-203ENST00000376061 KLHDC9Q8NEP7 349 aa11.5□□□□□ -0.57
PDPN-203ENST00000376061 SH3TC2Q8TF17 1288 aa11.5□□□□□ -0.57
PDPN-203ENST00000376061 PPP1R13LQ8WUF5 828 aa11.5□□□□□ -0.57
PDPN-203ENST00000376061 PRPF31Q8WWY3 499 aaKnown RBP11.5□□□□□ -0.57
PDPN-203ENST00000376061 ANP32BQ92688 251 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms