RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 WDR46O15213 610 aaKnown RBP14.62□□□□□ -0.07
C9orf47-203ENST00000375851 BAATQ14032 418 aaPredicted RBP14.62□□□□□ -0.07
C9orf47-203ENST00000375851 DSTYKQ6XUX3 929 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 ENGASEQ8NFI3 743 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 IRX2Q9BZI1 471 aaPredicted RBP14.62□□□□□ -0.07
C9orf47-203ENST00000375851 SLC9A2Q9UBY0 812 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 ARHGEF37A1IGU5 675 aa14.61□□□□□ -0.07
C9orf47-203ENST00000375851 SPDYE16A6NNV3 312 aaPredicted RBP14.61□□□□□ -0.07
C9orf47-203ENST00000375851 ZBED1O96006 694 aa14.61□□□□□ -0.07
C9orf47-203ENST00000375851 NR1D1P20393 614 aa14.61□□□□□ -0.07
C9orf47-203ENST00000375851 SPDYE2Q495Y8 402 aa14.61□□□□□ -0.07
C9orf47-203ENST00000375851 WDR24Q96S15 920 aa14.61□□□□□ -0.07
C9orf47-203ENST00000375851 ECE1P42892 770 aa14.61□□□□□ -0.07
C9orf47-203ENST00000375851 TNFAIP2Q03169 654 aa14.61□□□□□ -0.07
C9orf47-203ENST00000375851 BBS5Q8N3I7 341 aa14.61□□□□□ -0.07
C9orf47-203ENST00000375851 TEX13BQ9BXU2 312 aa14.61□□□□□ -0.07
C9orf47-203ENST00000375851 ACSL3O95573 720 aa14.61□□□□□ -0.07
C9orf47-203ENST00000375851 YWHABP31946 246 aaKnown RBP14.61□□□□□ -0.07
C9orf47-203ENST00000375851 CC2D1AQ6P1N0 951 aaPredicted RBP14.61□□□□□ -0.07
C9orf47-203ENST00000375851 RSBN1LQ6PCB5 846 aaPredicted RBP14.61□□□□□ -0.07
C9orf47-203ENST00000375851 ABT1Q9ULW3 272 aaKnown RBP14.61□□□□□ -0.07
C9orf47-203ENST00000375851 RIMBP3CA6NJZ7 1639 aa14.61□□□□□ -0.07
C9orf47-203ENST00000375851 RIMBP3BA6NNM3 1639 aa14.61□□□□□ -0.07
C9orf47-203ENST00000375851 RIMBP3Q9UFD9 1639 aa14.61□□□□□ -0.07
C9orf47-203ENST00000375851 TJP3O95049 919 aa14.61□□□□□ -0.07
C9orf47-203ENST00000375851 GSTA1P08263 222 aa14.61□□□□□ -0.07
C9orf47-203ENST00000375851 GSTA2P09210 222 aa14.61□□□□□ -0.07
C9orf47-203ENST00000375851 SMARCA1P28370 1054 aa14.61□□□□□ -0.07
C9orf47-203ENST00000375851 ZNF211Q13398 564 aaPredicted RBP14.61□□□□□ -0.07
C9orf47-203ENST00000375851 PPP6R3Q5H9R7 873 aaPredicted RBP14.61□□□□□ -0.07
C9orf47-203ENST00000375851 SLC10A5Q5PT55 438 aa14.61□□□□□ -0.07
C9orf47-203ENST00000375851 E4F1Q66K89 784 aaPredicted RBP14.61□□□□□ -0.07
C9orf47-203ENST00000375851 FBXL13Q8NEE6 735 aa14.61□□□□□ -0.07
C9orf47-203ENST00000375851 TACO1Q9BSH4 297 aaKnown RBP14.61□□□□□ -0.07
C9orf47-203ENST00000375851 C2orf40Q9H1Z8 148 aa14.61□□□□□ -0.07
C9orf47-203ENST00000375851 LRFN2Q9ULH4 789 aa14.61□□□□□ -0.07
C9orf47-203ENST00000375851 UBE2Q2LH0YL09 131 aa14.6□□□□□ -0.07
C9orf47-203ENST00000375851 MT-ND3P03897 115 aa14.6□□□□□ -0.07
C9orf47-203ENST00000375851 CLTAP09496 248 aa14.6□□□□□ -0.07
C9orf47-203ENST00000375851 FXR1P51114 621 aaKnown RBP eCLIP14.6□□□□□ -0.07
C9orf47-203ENST00000375851 DDX23Q9BUQ8 820 aaKnown RBP14.6□□□□□ -0.07
C9orf47-203ENST00000375851 KCNF1Q9H3M0 494 aa14.6□□□□□ -0.07
C9orf47-203ENST00000375851 JPH1Q9HDC5 661 aaPredicted RBP14.6□□□□□ -0.07
C9orf47-203ENST00000375851 PFDN6O15212 129 aa14.6□□□□□ -0.07
C9orf47-203ENST00000375851 SRGAP2BP0DMP2 458 aa14.6□□□□□ -0.07
C9orf47-203ENST00000375851 FGFR2P21802 821 aa14.6□□□□□ -0.07
C9orf47-203ENST00000375851 TBXAS1P24557 533 aaPredicted RBP14.6□□□□□ -0.07
C9orf47-203ENST00000375851 ARPP19P56211 112 aa14.6□□□□□ -0.07
C9orf47-203ENST00000375851 CCZ1BP86790 482 aa14.6□□□□□ -0.07
C9orf47-203ENST00000375851 CCZ1P86791 482 aaPredicted RBP14.6□□□□□ -0.07
C9orf47-203ENST00000375851 KIAA1841Q6NSI8 718 aa14.6□□□□□ -0.07
C9orf47-203ENST00000375851 ZNF564Q8TBZ8 553 aaPredicted RBP14.6□□□□□ -0.07
C9orf47-203ENST00000375851 REEP2Q9BRK0 252 aa14.6□□□□□ -0.07
C9orf47-203ENST00000375851 EPC1Q9H2F5 836 aa14.6□□□□□ -0.07
C9orf47-203ENST00000375851 RBAKQ9NYW8 714 aaPredicted RBP14.6□□□□□ -0.07
C9orf47-203ENST00000375851 AGO2Q9UKV8 859 aaKnown RBP14.6□□□□□ -0.07
C9orf47-203ENST00000375851 SPATA31D1Q6ZQQ2 1576 aa14.6□□□□□ -0.07
C9orf47-203ENST00000375851 SRGNP10124 158 aa14.6□□□□□ -0.07
C9orf47-203ENST00000375851 NR1I3Q14994 352 aa14.6□□□□□ -0.07
C9orf47-203ENST00000375851 HSPH1Q92598 858 aa14.6□□□□□ -0.07
C9orf47-203ENST00000375851 RBM41Q96IZ5 413 aaKnown RBP14.6□□□□□ -0.07
C9orf47-203ENST00000375851 SPATA33Q96N06 139 aa14.6□□□□□ -0.07
C9orf47-203ENST00000375851 MRPL4Q9BYD3 311 aaKnown RBP14.6□□□□□ -0.07
C9orf47-203ENST00000375851 DDX47Q9H0S4 455 aaKnown RBP14.6□□□□□ -0.07
C9orf47-203ENST00000375851 SMYD2Q9NRG4 433 aa14.6□□□□□ -0.07
C9orf47-203ENST00000375851 PACSIN2Q9UNF0 486 aaPredicted RBP14.6□□□□□ -0.07
C9orf47-203ENST00000375851 RFX1P22670 979 aa14.59□□□□□ -0.07
C9orf47-203ENST00000375851 GPC3P51654 580 aa14.59□□□□□ -0.07
C9orf47-203ENST00000375851 RAPH1Q70E73 1250 aa14.59□□□□□ -0.07
C9orf47-203ENST00000375851 PYROXD1Q8WU10 500 aa14.59□□□□□ -0.07
C9orf47-203ENST00000375851 RAB3IPQ96QF0 476 aaPredicted RBP14.59□□□□□ -0.07
C9orf47-203ENST00000375851 CNOT10Q9H9A5 744 aaKnown RBP14.59□□□□□ -0.07
C9orf47-203ENST00000375851 IPO11Q9UI26 975 aaKnown RBP14.59□□□□□ -0.07
C9orf47-203ENST00000375851 MAGED2Q9UNF1 606 aaPredicted RBP14.59□□□□□ -0.07
C9orf47-203ENST00000375851 CALB1P05937 261 aa14.59□□□□□ -0.07
C9orf47-203ENST00000375851 MYL3P08590 195 aa14.59□□□□□ -0.07
C9orf47-203ENST00000375851 SOX5P35711 763 aa14.59□□□□□ -0.07
C9orf47-203ENST00000375851 CENPUQ71F23 418 aa14.59□□□□□ -0.07
C9orf47-203ENST00000375851 GPD1LQ8N335 351 aa14.59□□□□□ -0.07
C9orf47-203ENST00000375851 NUP85Q9BW27 656 aa14.59□□□□□ -0.07
C9orf47-203ENST00000375851 ESYT2A0FGR8 921 aa14.59□□□□□ -0.07
C9orf47-203ENST00000375851 CCDC38Q502W7 563 aa14.59□□□□□ -0.07
C9orf47-203ENST00000375851 TWF2Q6IBS0 349 aaKnown RBP14.59□□□□□ -0.07
C9orf47-203ENST00000375851 SLC12A6Q9UHW9 1150 aa14.59□□□□□ -0.07
C9orf47-203ENST00000375851 COL3A1P02461 1466 aaPredicted RBP14.59□□□□□ -0.07
C9orf47-203ENST00000375851 RNF25Q96BH1 459 aaPredicted RBP14.59□□□□□ -0.07
C9orf47-203ENST00000375851 BCAP29Q9UHQ4 241 aa14.59□□□□□ -0.07
C9orf47-203ENST00000375851 ESYT3A0FGR9 886 aa14.58□□□□□ -0.07
C9orf47-203ENST00000375851 PSMD14O00487 310 aa14.58□□□□□ -0.07
C9orf47-203ENST00000375851 TXNDC9O14530 226 aa14.58□□□□□ -0.07
C9orf47-203ENST00000375851 NR3C2P08235 984 aa14.58□□□□□ -0.07
C9orf47-203ENST00000375851 STAT5BP51692 787 aa14.58□□□□□ -0.07
C9orf47-203ENST00000375851 C6orf118Q5T5N4 469 aa14.58□□□□□ -0.07
C9orf47-203ENST00000375851 C4orf50Q6ZRC1 276 aa14.58□□□□□ -0.07
C9orf47-203ENST00000375851 TXNRD3Q86VQ6 643 aa14.58□□□□□ -0.07
C9orf47-203ENST00000375851 RNF139Q8WU17 664 aa14.58□□□□□ -0.07
C9orf47-203ENST00000375851 MMP19Q99542 508 aa14.58□□□□□ -0.07
C9orf47-203ENST00000375851 AGPAT5Q9NUQ2 364 aa14.58□□□□□ -0.07
C9orf47-203ENST00000375851 HMGB1P1B2RPK0 211 aaPredicted RBP14.58□□□□□ -0.08
C9orf47-203ENST00000375851 NOL3O60936 208 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms