RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 S1PR5Q9H228 398 aa26.11■■□□□ 1.77
C9orf47-202ENST00000375850 SEPT9Q9UHD8 586 aaPredicted RBP26.11■■□□□ 1.77
C9orf47-202ENST00000375850 ALDH7A1P49419 539 aaKnown RBP26.1■■□□□ 1.77
C9orf47-202ENST00000375850 CLLU1OSQ5K130 101 aa26.1■■□□□ 1.77
C9orf47-202ENST00000375850 B3GNT9Q6UX72 402 aa26.1■■□□□ 1.77
C9orf47-202ENST00000375850 SUGP1Q8IWZ8 645 aaKnown RBP26.1■■□□□ 1.77
C9orf47-202ENST00000375850 SLC39A11Q8N1S5 342 aa26.1■■□□□ 1.77
C9orf47-202ENST00000375850 RNF169Q8NCN4 708 aa26.1■■□□□ 1.77
C9orf47-202ENST00000375850 PBXIP1Q96AQ6 731 aa26.1■■□□□ 1.77
C9orf47-202ENST00000375850 ZNF274Q96GC6 653 aaPredicted RBP26.1■■□□□ 1.77
C9orf47-202ENST00000375850 NCOA5Q9HCD5 579 aaKnown RBP26.1■■□□□ 1.77
C9orf47-202ENST00000375850 ZSWIM6Q9HCJ5 1215 aa26.1■■□□□ 1.77
C9orf47-202ENST00000375850 IGKV6-21A0A0C4DH24 114 aa26.09■■□□□ 1.77
C9orf47-202ENST00000375850 SIGLEC14Q08ET2 396 aa26.09■■□□□ 1.77
C9orf47-202ENST00000375850 BLIDQ8IZY5 108 aa26.09■■□□□ 1.77
C9orf47-202ENST00000375850 MRPL43Q8N983 215 aaKnown RBP26.09■■□□□ 1.77
C9orf47-202ENST00000375850 MBOAT7Q96N66 472 aa26.09■■□□□ 1.77
C9orf47-202ENST00000375850 CYP46A1Q9Y6A2 500 aa26.09■■□□□ 1.77
C9orf47-202ENST00000375850 C5orf42Q9H799 3197 aa26.09■■□□□ 1.77
C9orf47-202ENST00000375850 DKC1O60832 514 aaKnown RBP eCLIP26.08■■□□□ 1.77
C9orf47-202ENST00000375850 MRE11P49959 708 aa26.08■■□□□ 1.77
C9orf47-202ENST00000375850 RAB27AP51159 221 aa26.08■■□□□ 1.77
C9orf47-202ENST00000375850 RBM10P98175 930 aaKnown RBP26.08■■□□□ 1.77
C9orf47-202ENST00000375850 MTERF2Q49AM1 385 aa26.08■■□□□ 1.77
C9orf47-202ENST00000375850 EXOC8Q8IYI6 725 aa26.08■■□□□ 1.77
C9orf47-202ENST00000375850 NECTIN4Q96NY8 510 aa26.08■■□□□ 1.77
C9orf47-202ENST00000375850 NR2E1Q9Y466 385 aa26.08■■□□□ 1.77
C9orf47-202ENST00000375850 HIDE1A8MVS5 230 aa26.07■■□□□ 1.76
C9orf47-202ENST00000375850 ITIH3Q06033 890 aa26.07■■□□□ 1.76
C9orf47-202ENST00000375850 GIT2Q14161 759 aa26.07■■□□□ 1.76
C9orf47-202ENST00000375850 NONOQ15233 471 aaKnown RBP eCLIP26.07■■□□□ 1.76
C9orf47-202ENST00000375850 CES5AQ6NT32 575 aa26.07■■□□□ 1.76
C9orf47-202ENST00000375850 SYCE2Q6PIF2 218 aa26.07■■□□□ 1.76
C9orf47-202ENST00000375850 KRT25Q7Z3Z0 450 aa26.07■■□□□ 1.76
C9orf47-202ENST00000375850 HELQQ8TDG4 1101 aa26.07■■□□□ 1.76
C9orf47-202ENST00000375850 TMEM169Q96HH4 297 aa26.07■■□□□ 1.76
C9orf47-202ENST00000375850 ZNF668Q96K58 619 aaPredicted RBP26.07■■□□□ 1.76
C9orf47-202ENST00000375850 TM6SF1Q9BZW5 370 aa26.07■■□□□ 1.76
C9orf47-202ENST00000375850 STK39Q9UEW8 545 aa26.07■■□□□ 1.76
C9orf47-202ENST00000375850 PPME1Q9Y570 386 aa26.07■■□□□ 1.76
C9orf47-202ENST00000375850 TECTAO75443 2155 aa26.06■■□□□ 1.76
C9orf47-202ENST00000375850 M0R2N6 131 aa26.06■■□□□ 1.76
C9orf47-202ENST00000375850 MAFO75444 373 aaPredicted RBP26.06■■□□□ 1.76
C9orf47-202ENST00000375850 TDP2O95551 362 aa26.06■■□□□ 1.76
C9orf47-202ENST00000375850 PHKA2P46019 1235 aa26.06■■□□□ 1.76
C9orf47-202ENST00000375850 PSMC5P62195 406 aa26.06■■□□□ 1.76
C9orf47-202ENST00000375850 TOB2Q14106 344 aaPredicted RBP26.06■■□□□ 1.76
C9orf47-202ENST00000375850 PTPN21Q16825 1174 aa26.06■■□□□ 1.76
C9orf47-202ENST00000375850 FBXL6Q8N531 539 aa26.06■■□□□ 1.76
C9orf47-202ENST00000375850 ETNPPLQ8TBG4 499 aa26.06■■□□□ 1.76
C9orf47-202ENST00000375850 CEP89Q96ST8 783 aa26.06■■□□□ 1.76
C9orf47-202ENST00000375850 ZNF318Q5VUA4 2279 aa26.05■■□□□ 1.76
C9orf47-202ENST00000375850 C2orf71A6NGG8 1288 aa26.05■■□□□ 1.76
C9orf47-202ENST00000375850 STBD1O95210 358 aa26.05■■□□□ 1.76
C9orf47-202ENST00000375850 PBX3P40426 434 aa26.05■■□□□ 1.76
C9orf47-202ENST00000375850 POLGP54098 1239 aaPredicted RBP26.05■■□□□ 1.76
C9orf47-202ENST00000375850 PTPN5P54829 565 aa26.05■■□□□ 1.76
C9orf47-202ENST00000375850 BCAR1P56945 870 aa26.05■■□□□ 1.76
C9orf47-202ENST00000375850 TWF2Q6IBS0 349 aaKnown RBP26.05■■□□□ 1.76
C9orf47-202ENST00000375850 LLGL2Q6P1M3 1020 aa26.05■■□□□ 1.76
C9orf47-202ENST00000375850 GLB1LQ6UWU2 654 aa26.05■■□□□ 1.76
C9orf47-202ENST00000375850 SUCLA2Q9P2R7 463 aaPredicted RBP26.05■■□□□ 1.76
C9orf47-202ENST00000375850 DDX25Q9UHL0 483 aaKnown RBP26.05■■□□□ 1.76
C9orf47-202ENST00000375850 HCFC2Q9Y5Z7 792 aa26.05■■□□□ 1.76
C9orf47-202ENST00000375850 A0A087WZ62 844 aa26.04■■□□□ 1.76
C9orf47-202ENST00000375850 ZNF623O75123 536 aa26.04■■□□□ 1.76
C9orf47-202ENST00000375850 FGFR4P22455 802 aa26.04■■□□□ 1.76
C9orf47-202ENST00000375850 DRP2Q13474 957 aa26.04■■□□□ 1.76
C9orf47-202ENST00000375850 FAM20AQ96MK3 541 aa26.04■■□□□ 1.76
C9orf47-202ENST00000375850 FDXACB1Q9BRP7 624 aaPredicted RBP26.04■■□□□ 1.76
C9orf47-202ENST00000375850 ADAM7Q9H2U9 754 aa26.04■■□□□ 1.76
C9orf47-202ENST00000375850 IRAK3Q9Y616 596 aa26.04■■□□□ 1.76
C9orf47-202ENST00000375850 DDX11L8A8MPP1 907 aa26.03■■□□□ 1.76
C9orf47-202ENST00000375850 CDKL5O76039 1030 aa26.03■■□□□ 1.76
C9orf47-202ENST00000375850 GCFC2P16383 781 aaKnown RBP26.03■■□□□ 1.76
C9orf47-202ENST00000375850 RHPN2Q8IUC4 686 aa26.03■■□□□ 1.76
C9orf47-202ENST00000375850 TMEM87AQ8NBN3 555 aa26.03■■□□□ 1.76
C9orf47-202ENST00000375850 GJA10Q969M2 543 aa26.03■■□□□ 1.76
C9orf47-202ENST00000375850 PGBD4Q96DM1 585 aa26.03■■□□□ 1.76
C9orf47-202ENST00000375850 NAP1L4Q99733 375 aaKnown RBP26.03■■□□□ 1.76
C9orf47-202ENST00000375850 DZANK1Q9NVP4 752 aa26.03■■□□□ 1.76
C9orf47-202ENST00000375850 PIN4Q9Y237 131 aaKnown RBP26.03■■□□□ 1.76
C9orf47-202ENST00000375850 XBP1P17861 261 aa26.02■■□□□ 1.76
C9orf47-202ENST00000375850 MTHFRP42898 656 aa26.02■■□□□ 1.76
C9orf47-202ENST00000375850 PPP2R5CQ13362 524 aa26.02■■□□□ 1.76
C9orf47-202ENST00000375850 SLC7A3Q8WY07 619 aa26.02■■□□□ 1.76
C9orf47-202ENST00000375850 RIPOR3Q96MK2 946 aa26.02■■□□□ 1.76
C9orf47-202ENST00000375850 FAM105AQ9NUU6 356 aa26.02■■□□□ 1.76
C9orf47-202ENST00000375850 CLASP2O75122 1294 aaKnown RBP26.01■■□□□ 1.75
C9orf47-202ENST00000375850 CSDE1O75534 798 aaKnown RBP26.01■■□□□ 1.75
C9orf47-202ENST00000375850 CXCL14O95715 111 aa26.01■■□□□ 1.75
C9orf47-202ENST00000375850 QARSP47897 775 aaKnown RBP26.01■■□□□ 1.75
C9orf47-202ENST00000375850 NPY5RQ15761 445 aa26.01■■□□□ 1.75
C9orf47-202ENST00000375850 NOMO2Q5JPE7 1267 aa26.01■■□□□ 1.75
C9orf47-202ENST00000375850 PPP4R3AQ6IN85 833 aa26.01■■□□□ 1.75
C9orf47-202ENST00000375850 ANO5Q75V66 913 aa26.01■■□□□ 1.75
C9orf47-202ENST00000375850 CATSPER4Q7RTX7 472 aa26.01■■□□□ 1.75
C9orf47-202ENST00000375850 ZBTB33Q86T24 672 aa26.01■■□□□ 1.75
C9orf47-202ENST00000375850 DDX53Q86TM3 631 aaKnown RBP26.01■■□□□ 1.75
C9orf47-202ENST00000375850 VPS52Q8N1B4 723 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms