RNA–Protein interactions for RNA: ENST00000375329.6

APOA1-205, Transcript of apolipoprotein A1, humanhuman

TSL 2 BASIC

Gene APOA1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-205ENST00000375329 SRGAP1Q7Z6B7 1085 aa17.16■□□□□ 0.34
APOA1-205ENST00000375329 CRIPAKQ8N1N5 446 aa17.16■□□□□ 0.34
APOA1-205ENST00000375329 MICALL1Q8N3F8 863 aa17.16■□□□□ 0.34
APOA1-205ENST00000375329 PRPF31Q8WWY3 499 aaKnown RBP17.16■□□□□ 0.34
APOA1-205ENST00000375329 CLP1Q92989 425 aaKnown RBP17.16■□□□□ 0.34
APOA1-205ENST00000375329 ZNF668Q96K58 619 aaPredicted RBP17.16■□□□□ 0.34
APOA1-205ENST00000375329 NLRP4Q96MN2 994 aa17.16■□□□□ 0.34
APOA1-205ENST00000375329 FDXACB1Q9BRP7 624 aaPredicted RBP17.16■□□□□ 0.34
APOA1-205ENST00000375329 C11orf84Q9BUA3 381 aaPredicted RBP17.16■□□□□ 0.34
APOA1-205ENST00000375329 PLVAPQ9BX97 442 aa17.16■□□□□ 0.34
APOA1-205ENST00000375329 CHMP5Q9NZZ3 219 aa17.16■□□□□ 0.34
APOA1-205ENST00000375329 DBR1Q9UK59 544 aaKnown RBP17.16■□□□□ 0.34
APOA1-205ENST00000375329 CIZ1Q9ULV3 898 aaPredicted RBP17.16■□□□□ 0.34
APOA1-205ENST00000375329 ZDHHC9Q9Y397 364 aa17.16■□□□□ 0.34
APOA1-205ENST00000375329 ARID2Q68CP9 1835 aa17.16■□□□□ 0.34
APOA1-205ENST00000375329 CUL9Q8IWT3 2517 aa17.16■□□□□ 0.34
APOA1-205ENST00000375329 A0A0C4DFX4 3053 aa17.15■□□□□ 0.34
APOA1-205ENST00000375329 H3BNC9 293 aa17.15■□□□□ 0.34
APOA1-205ENST00000375329 MGEA5O60502 916 aa17.15■□□□□ 0.34
APOA1-205ENST00000375329 BRD1O95696 1058 aa17.15■□□□□ 0.34
APOA1-205ENST00000375329 CTNNB1P35222 781 aa17.15■□□□□ 0.34
APOA1-205ENST00000375329 BMPR1AP36894 532 aa17.15■□□□□ 0.34
APOA1-205ENST00000375329 TOB1P50616 345 aaPredicted RBP17.15■□□□□ 0.34
APOA1-205ENST00000375329 NUCB2P80303 420 aa17.15■□□□□ 0.34
APOA1-205ENST00000375329 LAMTOR4Q0VGL1 99 aa17.15■□□□□ 0.34
APOA1-205ENST00000375329 RESTQ13127 1097 aa17.15■□□□□ 0.34
APOA1-205ENST00000375329 GPM6BQ13491 265 aa17.15■□□□□ 0.34
APOA1-205ENST00000375329 TFDP1Q14186 410 aa17.15■□□□□ 0.34
APOA1-205ENST00000375329 PCBP1Q15365 356 aaKnown RBP eCLIP17.15■□□□□ 0.343e-33■□□□□ 9.3
APOA1-205ENST00000375329 CCDC85BQ15834 202 aaPredicted RBP17.15■□□□□ 0.34
APOA1-205ENST00000375329 NAALADL2Q58DX5 795 aa17.15■□□□□ 0.34
APOA1-205ENST00000375329 CATSPER4Q7RTX7 472 aa17.15■□□□□ 0.34
APOA1-205ENST00000375329 CATSPER3Q86XQ3 398 aa17.15■□□□□ 0.34
APOA1-205ENST00000375329 C4orf32Q8N8J7 132 aa17.15■□□□□ 0.34
APOA1-205ENST00000375329 ZNF579Q8NAF0 562 aaKnown RBP17.15■□□□□ 0.34
APOA1-205ENST00000375329 GDPD5Q8WTR4 605 aa17.15■□□□□ 0.34
APOA1-205ENST00000375329 RSPH1Q8WYR4 309 aa17.15■□□□□ 0.34
APOA1-205ENST00000375329 TMEM143Q96AN5 459 aa17.15■□□□□ 0.34
APOA1-205ENST00000375329 LRWD1Q9UFC0 647 aa17.15■□□□□ 0.34
APOA1-205ENST00000375329 PCDHB6Q9Y5E3 794 aa17.15■□□□□ 0.34
APOA1-205ENST00000375329 PRUNE2Q8WUY3 3088 aa17.15■□□□□ 0.34
APOA1-205ENST00000375329 C5orf67F2Z3F1 127 aa17.14■□□□□ 0.33
APOA1-205ENST00000375329 ZBTB39O15060 712 aa17.14■□□□□ 0.33
APOA1-205ENST00000375329 LPXNO60711 386 aa17.14■□□□□ 0.33
APOA1-205ENST00000375329 EOMESO95936 686 aa17.14■□□□□ 0.33
APOA1-205ENST00000375329 F13A1P00488 732 aa17.14■□□□□ 0.33
APOA1-205ENST00000375329 SRGAP2CP0DJJ0 459 aa17.14■□□□□ 0.33
APOA1-205ENST00000375329 SPATA31C1P0DKV0 1188 aa17.14■□□□□ 0.33
APOA1-205ENST00000375329 PDIA4P13667 645 aaKnown RBP17.14■□□□□ 0.33
APOA1-205ENST00000375329 IBSPP21815 317 aaPredicted RBP17.14■□□□□ 0.33
APOA1-205ENST00000375329 PHKA2P46019 1235 aa17.14■□□□□ 0.33
APOA1-205ENST00000375329 RARRES1P49788 294 aa17.14■□□□□ 0.33
APOA1-205ENST00000375329 NCBP1Q09161 790 aaKnown RBP17.14■□□□□ 0.33
APOA1-205ENST00000375329 DTHD1Q6ZMT9 781 aa17.14■□□□□ 0.33
APOA1-205ENST00000375329 BRAPQ7Z569 592 aa17.14■□□□□ 0.33
APOA1-205ENST00000375329 SPRED2Q7Z698 418 aa17.14■□□□□ 0.33
APOA1-205ENST00000375329 MCPH1Q8NEM0 835 aa17.14■□□□□ 0.33
APOA1-205ENST00000375329 PIGOQ8TEQ8 1089 aa17.14■□□□□ 0.33
APOA1-205ENST00000375329 LMAN2LQ9H0V9 348 aa17.14■□□□□ 0.33
APOA1-205ENST00000375329 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.14■□□□□ 0.33
APOA1-205ENST00000375329 AAASQ9NRG9 546 aa17.14■□□□□ 0.33
APOA1-205ENST00000375329 A0A0U1RQF3 1178 aa17.13■□□□□ 0.33
APOA1-205ENST00000375329 CCT6AP40227 531 aaKnown RBP17.13■□□□□ 0.33
APOA1-205ENST00000375329 POU5F1BQ06416 359 aa17.13■□□□□ 0.33
APOA1-205ENST00000375329 SKIV2LQ15477 1246 aaKnown RBP17.13■□□□□ 0.33
APOA1-205ENST00000375329 FOXD4L6Q3SYB3 417 aaPredicted RBP17.13■□□□□ 0.33
APOA1-205ENST00000375329 FOXD4L3Q6VB84 417 aaPredicted RBP17.13■□□□□ 0.33
APOA1-205ENST00000375329 KSR1Q8IVT5 923 aa17.13■□□□□ 0.33
APOA1-205ENST00000375329 ABI1Q8IZP0 508 aa17.13■□□□□ 0.33
APOA1-205ENST00000375329 RNF149Q8NC42 400 aa17.13■□□□□ 0.33
APOA1-205ENST00000375329 P2RX5Q93086 422 aa17.13■□□□□ 0.33
APOA1-205ENST00000375329 MRPL38Q96DV4 380 aaKnown RBP17.13■□□□□ 0.33
APOA1-205ENST00000375329 TRAIPQ9BWF2 469 aa17.13■□□□□ 0.33
APOA1-205ENST00000375329 IFT122Q9HBG6 1241 aa17.13■□□□□ 0.33
APOA1-205ENST00000375329 THEGQ9P2T0 379 aa17.13■□□□□ 0.33
APOA1-205ENST00000375329 FNDC1Q4ZHG4 1894 aaPredicted RBP17.13■□□□□ 0.33
APOA1-205ENST00000375329 MYO7AQ13402 2215 aa17.13■□□□□ 0.33
APOA1-205ENST00000375329 BRWD1Q9NSI6 2320 aa17.12■□□□□ 0.33
APOA1-205ENST00000375329 ARHGEF35A5YM69 484 aa17.12■□□□□ 0.33
APOA1-205ENST00000375329 RBAK-RBAKDNI3L0D1 243 aa17.12■□□□□ 0.33
APOA1-205ENST00000375329 MED24O75448 989 aa17.12■□□□□ 0.33
APOA1-205ENST00000375329 BMP15O95972 392 aa17.12■□□□□ 0.33
APOA1-205ENST00000375329 RAB27AP51159 221 aa17.12■□□□□ 0.33
APOA1-205ENST00000375329 NBR1Q14596 966 aa17.12■□□□□ 0.33
APOA1-205ENST00000375329 CSPP1Q1MSJ5 1256 aa17.12■□□□□ 0.33
APOA1-205ENST00000375329 AAK1Q2M2I8 961 aa17.12■□□□□ 0.33
APOA1-205ENST00000375329 PAN2Q504Q3 1202 aaKnown RBP17.12■□□□□ 0.33
APOA1-205ENST00000375329 TIGD5Q53EQ6 642 aa17.12■□□□□ 0.33
APOA1-205ENST00000375329 SPOUT1Q5T280 376 aaKnown RBP17.12■□□□□ 0.33
APOA1-205ENST00000375329 KRT79Q5XKE5 535 aa17.12■□□□□ 0.33
APOA1-205ENST00000375329 ARL6IP4Q66PJ3 421 aaKnown RBP17.12■□□□□ 0.33
APOA1-205ENST00000375329 TWF2Q6IBS0 349 aaKnown RBP17.12■□□□□ 0.33
APOA1-205ENST00000375329 FAM173BQ6P4H8 233 aa17.12■□□□□ 0.33
APOA1-205ENST00000375329 ECHDC2Q86YB7 292 aa17.12■□□□□ 0.33
APOA1-205ENST00000375329 IGSF22Q8N9C0 903 aa17.12■□□□□ 0.33
APOA1-205ENST00000375329 ATXN2LQ8WWM7 1075 aaKnown RBP17.12■□□□□ 0.33
APOA1-205ENST00000375329 TMEM117Q9H0C3 514 aa17.12■□□□□ 0.33
APOA1-205ENST00000375329 BMP2KQ9NSY1 1161 aaPredicted RBP17.12■□□□□ 0.33
APOA1-205ENST00000375329 PIN4Q9Y237 131 aaKnown RBP17.12■□□□□ 0.33
APOA1-205ENST00000375329 PCDHB12Q9Y5F1 795 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms