RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 CCDC148Q8NFR7 591 aa15.93■□□□□ 0.14
PTCH1-202ENST00000375271 TEKT3Q9BXF9 490 aa15.93■□□□□ 0.14
PTCH1-202ENST00000375271 INO80BQ9C086 356 aaPredicted RBP15.93■□□□□ 0.14
PTCH1-202ENST00000375271 DISC1Q9NRI5 854 aa15.93■□□□□ 0.14
PTCH1-202ENST00000375271 SEPT9Q9UHD8 586 aaPredicted RBP15.93■□□□□ 0.14
PTCH1-202ENST00000375271 FBXL21Q9UKT6 434 aa15.93■□□□□ 0.14
PTCH1-202ENST00000375271 INPP5FQ9Y2H2 1132 aa15.93■□□□□ 0.14
PTCH1-202ENST00000375271 ASGR2P07307 311 aa15.92■□□□□ 0.14
PTCH1-202ENST00000375271 WEE2P0C1S8 567 aa15.92■□□□□ 0.14
PTCH1-202ENST00000375271 SFNP31947 248 aa15.92■□□□□ 0.14
PTCH1-202ENST00000375271 GPC3P51654 580 aa15.92■□□□□ 0.14
PTCH1-202ENST00000375271 JAK3P52333 1124 aa15.92■□□□□ 0.14
PTCH1-202ENST00000375271 RCAN1P53805 252 aa15.92■□□□□ 0.14
PTCH1-202ENST00000375271 CCDC149Q6ZUS6 474 aa15.92■□□□□ 0.14
PTCH1-202ENST00000375271 NKD2Q969F2 451 aaPredicted RBP15.92■□□□□ 0.14
PTCH1-202ENST00000375271 EMILIN2Q9BXX0 1053 aa15.92■□□□□ 0.14
PTCH1-202ENST00000375271 ADAMTS10Q9H324 1103 aa15.92■□□□□ 0.14
PTCH1-202ENST00000375271 CYP26B1Q9NR63 512 aa15.92■□□□□ 0.14
PTCH1-202ENST00000375271 STK39Q9UEW8 545 aa15.92■□□□□ 0.14
PTCH1-202ENST00000375271 LIMD1Q9UGP4 676 aa15.92■□□□□ 0.14
PTCH1-202ENST00000375271 CDH22Q9UJ99 828 aa15.92■□□□□ 0.14
PTCH1-202ENST00000375271 PIN4Q9Y237 131 aaKnown RBP15.92■□□□□ 0.14
PTCH1-202ENST00000375271 ESYT2A0FGR8 921 aa15.91■□□□□ 0.14
PTCH1-202ENST00000375271 STK25O00506 426 aa15.91■□□□□ 0.14
PTCH1-202ENST00000375271 FGFR4P22455 802 aa15.91■□□□□ 0.14
PTCH1-202ENST00000375271 POLGP54098 1239 aaPredicted RBP15.91■□□□□ 0.14
PTCH1-202ENST00000375271 MTERF2Q49AM1 385 aa15.91■□□□□ 0.14
PTCH1-202ENST00000375271 OTOP3Q7RTS5 596 aa15.91■□□□□ 0.14
PTCH1-202ENST00000375271 ZDHHC14Q8IZN3 488 aa15.91■□□□□ 0.14
PTCH1-202ENST00000375271 C12orf76Q8N812 135 aaPredicted RBP15.91■□□□□ 0.14
PTCH1-202ENST00000375271 URGCPQ8TCY9 931 aa15.91■□□□□ 0.14
PTCH1-202ENST00000375271 FAM193BQ96PV7 902 aaPredicted RBP15.91■□□□□ 0.14
PTCH1-202ENST00000375271 ZMYND12Q9H0C1 365 aa15.91■□□□□ 0.14
PTCH1-202ENST00000375271 GBP3Q9H0R5 595 aa15.91■□□□□ 0.14
PTCH1-202ENST00000375271 SFXN1Q9H9B4 322 aa15.91■□□□□ 0.14
PTCH1-202ENST00000375271 CHST12Q9NRB3 414 aa15.91■□□□□ 0.14
PTCH1-202ENST00000375271 RNF19AQ9NV58 838 aa15.91■□□□□ 0.14
PTCH1-202ENST00000375271 BRPF3Q9ULD4 1205 aa15.91■□□□□ 0.14
PTCH1-202ENST00000375271 USTQ9Y2C2 406 aa15.91■□□□□ 0.14
PTCH1-202ENST00000375271 PROB1E7EW31 1015 aa15.9■□□□□ 0.14
PTCH1-202ENST00000375271 RAB27AP51159 221 aa15.9■□□□□ 0.14
PTCH1-202ENST00000375271 CLCN5P51795 746 aa15.9■□□□□ 0.14
PTCH1-202ENST00000375271 FUT2Q10981 343 aa15.9■□□□□ 0.14
PTCH1-202ENST00000375271 LRCH2Q5VUJ6 765 aa15.9■□□□□ 0.14
PTCH1-202ENST00000375271 TMC5Q6UXY8 1006 aa15.9■□□□□ 0.14
PTCH1-202ENST00000375271 TMEM105Q8N8V8 129 aa15.9■□□□□ 0.14
PTCH1-202ENST00000375271 AUTS2Q8WXX7 1259 aa15.9■□□□□ 0.14
PTCH1-202ENST00000375271 PGBD4Q96DM1 585 aa15.9■□□□□ 0.14
PTCH1-202ENST00000375271 JPH2Q9BR39 696 aaPredicted RBP15.9■□□□□ 0.14
PTCH1-202ENST00000375271 ZBP1Q9H171 429 aa15.9■□□□□ 0.14
PTCH1-202ENST00000375271 ZFHX2Q9C0A1 2572 aaPredicted RBP15.9■□□□□ 0.14
PTCH1-202ENST00000375271 CFAP54Q96N23 3096 aa15.9■□□□□ 0.14
PTCH1-202ENST00000375271 PRR23AA6NEV1 266 aa15.89■□□□□ 0.13
PTCH1-202ENST00000375271 CTSAP10619 480 aa15.89■□□□□ 0.13
PTCH1-202ENST00000375271 EPCAMP16422 314 aa15.89■□□□□ 0.13
PTCH1-202ENST00000375271 KLRC2P26717 231 aa15.89■□□□□ 0.13
PTCH1-202ENST00000375271 CDC27P30260 824 aa15.89■□□□□ 0.13
PTCH1-202ENST00000375271 NBL1P41271 181 aa15.89■□□□□ 0.13
PTCH1-202ENST00000375271 PHKA2P46019 1235 aa15.89■□□□□ 0.13
PTCH1-202ENST00000375271 COL9A3Q14050 684 aaPredicted RBP15.89■□□□□ 0.13
PTCH1-202ENST00000375271 LONRF3Q496Y0 759 aa15.89■□□□□ 0.13
PTCH1-202ENST00000375271 NOMO2Q5JPE7 1267 aa15.89■□□□□ 0.13
PTCH1-202ENST00000375271 ASCL5Q7RTU5 278 aa15.89■□□□□ 0.13
PTCH1-202ENST00000375271 CATSPER4Q7RTX7 472 aa15.89■□□□□ 0.13
PTCH1-202ENST00000375271 MIER3Q7Z3K6 550 aa15.89■□□□□ 0.13
PTCH1-202ENST00000375271 DDX53Q86TM3 631 aaKnown RBP15.89■□□□□ 0.13
PTCH1-202ENST00000375271 CCDC136Q96JN2 1154 aa15.89■□□□□ 0.13
PTCH1-202ENST00000375271 RIT2Q99578 217 aa15.89■□□□□ 0.13
PTCH1-202ENST00000375271 CACNA1HO95180 2353 aa15.89■□□□□ 0.13
PTCH1-202ENST00000375271 CSDE1O75534 798 aaKnown RBP15.88■□□□□ 0.13
PTCH1-202ENST00000375271 SSBP05455 408 aaKnown RBP eCLIP15.88■□□□□ 0.13
PTCH1-202ENST00000375271 ADD1P35611 737 aaKnown RBP15.88■□□□□ 0.13
PTCH1-202ENST00000375271 EXOSC10Q01780 885 aaKnown RBP15.88■□□□□ 0.13
PTCH1-202ENST00000375271 NONOQ15233 471 aaKnown RBP eCLIP15.88■□□□□ 0.13
PTCH1-202ENST00000375271 FRMD5Q7Z6J6 570 aa15.88■□□□□ 0.13
PTCH1-202ENST00000375271 ZNF598Q86UK7 904 aaKnown RBP15.88■□□□□ 0.13
PTCH1-202ENST00000375271 ZNF410Q86VK4 478 aa15.88■□□□□ 0.13
PTCH1-202ENST00000375271 RHPN2Q8IUC4 686 aa15.88■□□□□ 0.13
PTCH1-202ENST00000375271 KCNG4Q8TDN1 519 aa15.88■□□□□ 0.13
PTCH1-202ENST00000375271 IGSF21Q96ID5 467 aa15.88■□□□□ 0.13
PTCH1-202ENST00000375271 NLRP4Q96MN2 994 aa15.88■□□□□ 0.13
PTCH1-202ENST00000375271 C22orf23Q9BZE7 217 aa15.88■□□□□ 0.13
PTCH1-202ENST00000375271 DPP7Q9UHL4 492 aa15.88■□□□□ 0.13
PTCH1-202ENST00000375271 MYO10Q9HD67 2058 aa15.87■□□□□ 0.13
PTCH1-202ENST00000375271 A0A087WZ62 844 aa15.87■□□□□ 0.13
PTCH1-202ENST00000375271 ZNF862O60290 1169 aa15.87■□□□□ 0.13
PTCH1-202ENST00000375271 CIITAP33076 1130 aa15.87■□□□□ 0.13
PTCH1-202ENST00000375271 NLRP5P59047 1200 aa15.87■□□□□ 0.13
PTCH1-202ENST00000375271 IRX6P78412 446 aaPredicted RBP15.87■□□□□ 0.13
PTCH1-202ENST00000375271 TDGQ13569 410 aa15.87■□□□□ 0.13
PTCH1-202ENST00000375271 XKR3Q5GH77 459 aa15.87■□□□□ 0.13
PTCH1-202ENST00000375271 LINC01465Q8N7H1 131 aa15.87■□□□□ 0.13
PTCH1-202ENST00000375271 RDM1Q8NG50 284 aa15.87■□□□□ 0.13
PTCH1-202ENST00000375271 CRYGNQ8WXF5 182 aa15.87■□□□□ 0.13
PTCH1-202ENST00000375271 STAMQ92783 540 aa15.87■□□□□ 0.13
PTCH1-202ENST00000375271 LPPQ93052 612 aa15.87■□□□□ 0.13
PTCH1-202ENST00000375271 RTP3Q9BQQ7 232 aa15.87■□□□□ 0.13
PTCH1-202ENST00000375271 FDXACB1Q9BRP7 624 aaPredicted RBP15.87■□□□□ 0.13
PTCH1-202ENST00000375271 SMOC2Q9H3U7 446 aa15.87■□□□□ 0.13
PTCH1-202ENST00000375271 MRPL17Q9NRX2 175 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms