RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 ANKS1AQ92625 1134 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 ABCC1P33527 1531 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 IQSEC2Q5JU85 1478 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 PPP1R3GB7ZBB8 358 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 H3BRJ5 948 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 OR52Z1P0C646 297 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 ARPC4P59998 168 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 EIF4A1P60842 406 aaKnown RBP10.94□□□□□ -0.66
CD28-202ENST00000374481 CAVIN4Q5BKX8 364 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 ATG16L1Q676U5 607 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 C1orf228Q6PIY5 440 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 NLRP9Q7RTR0 991 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 FOXP4Q8IVH2 680 aaPredicted RBP10.94□□□□□ -0.66
CD28-202ENST00000374481 GIMAP4Q9NUV9 329 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 TMOD4Q9NZQ9 345 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 ADAM22Q9P0K1 906 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 PHTF1Q9UMS5 762 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 OCM2P0CE71 109 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 OCMP0CE72 109 aaPredicted RBP10.94□□□□□ -0.66
CD28-202ENST00000374481 KRT5P13647 590 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 VAV1P15498 845 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 GALK1P51570 392 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 LRRC63Q05C16 580 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 SLC18A3Q16572 532 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 CDKAL1Q5VV42 579 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 CATSPER1Q8NEC5 780 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 ZNF570Q96NI8 536 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 EDEM3Q9BZQ6 932 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 TRABDQ9H4I3 376 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 SAYSD1Q9NPB0 183 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 THRAP3Q9Y2W1 955 aaKnown RBP10.94□□□□□ -0.66
CD28-202ENST00000374481 ARIH1Q9Y4X5 557 aaPredicted RBP10.94□□□□□ -0.66
CD28-202ENST00000374481 SMIM31A0A1B0GVY4 71 aa10.93□□□□□ -0.66
CD28-202ENST00000374481 MIF4GDA9UHW6 222 aaKnown RBP10.93□□□□□ -0.66
CD28-202ENST00000374481 PPIP5K2O43314 1243 aa10.93□□□□□ -0.66
CD28-202ENST00000374481 CCDC159P0C7I6 412 aa10.93□□□□□ -0.66
CD28-202ENST00000374481 TRPC1P48995 793 aa10.93□□□□□ -0.66
CD28-202ENST00000374481 ERVK-9P63128 1117 aa10.93□□□□□ -0.66
CD28-202ENST00000374481 GSTA3Q16772 222 aa10.93□□□□□ -0.66
CD28-202ENST00000374481 AKAP4Q5JQC9 854 aa10.93□□□□□ -0.66
CD28-202ENST00000374481 USP37Q86T82 979 aa10.93□□□□□ -0.66
CD28-202ENST00000374481 ATXN2LQ8WWM7 1075 aaKnown RBP10.93□□□□□ -0.66
CD28-202ENST00000374481 PNMA3Q9UL41 463 aa10.93□□□□□ -0.66
CD28-202ENST00000374481 PLAGL2Q9UPG8 496 aa10.93□□□□□ -0.66
CD28-202ENST00000374481 TRIM33Q9UPN9 1127 aa10.93□□□□□ -0.66
CD28-202ENST00000374481 SOS2Q07890 1332 aaPredicted RBP10.93□□□□□ -0.66
CD28-202ENST00000374481 MAGEB6P1A0A0J9YX57 407 aa10.93□□□□□ -0.66
CD28-202ENST00000374481 ALOX15P16050 662 aaPredicted RBP10.93□□□□□ -0.66
CD28-202ENST00000374481 CD44P16070 742 aaKnown RBP10.93□□□□□ -0.66
CD28-202ENST00000374481 S100A1P23297 94 aa10.93□□□□□ -0.66
CD28-202ENST00000374481 MAP4P27816 1152 aaKnown RBP10.93□□□□□ -0.66
CD28-202ENST00000374481 ATP1A4Q13733 1029 aa10.93□□□□□ -0.66
CD28-202ENST00000374481 SLC5A9Q2M3M2 681 aa10.93□□□□□ -0.66
CD28-202ENST00000374481 MDH1BQ5I0G3 518 aa10.93□□□□□ -0.66
CD28-202ENST00000374481 NXNQ6DKJ4 435 aa10.93□□□□□ -0.66
CD28-202ENST00000374481 POTEEQ6S8J3 1075 aa10.93□□□□□ -0.66
CD28-202ENST00000374481 CROCCP3Q8IVE0 287 aa10.93□□□□□ -0.66
CD28-202ENST00000374481 PAIP1Q9H074 479 aaKnown RBP10.93□□□□□ -0.66
CD28-202ENST00000374481 RANBP17Q9H2T7 1088 aaKnown RBP10.93□□□□□ -0.66
CD28-202ENST00000374481 TNFRSF8P28908 595 aa10.93□□□□□ -0.66
CD28-202ENST00000374481 KLK7P49862 253 aa10.93□□□□□ -0.66
CD28-202ENST00000374481 CALCRLQ16602 461 aa10.93□□□□□ -0.66
CD28-202ENST00000374481 ZC3H12AQ5D1E8 599 aaKnown RBP10.93□□□□□ -0.66
CD28-202ENST00000374481 LIN9Q5TKA1 542 aa10.93□□□□□ -0.66
CD28-202ENST00000374481 WDR78Q5VTH9 848 aa10.93□□□□□ -0.66
CD28-202ENST00000374481 JAMLQ86YT9 394 aa10.93□□□□□ -0.66
CD28-202ENST00000374481 STKLD1Q8NE28 680 aa10.93□□□□□ -0.66
CD28-202ENST00000374481 METTL14Q9HCE5 456 aaKnown RBP10.93□□□□□ -0.66
CD28-202ENST00000374481 SENP1Q9P0U3 644 aa10.93□□□□□ -0.66
CD28-202ENST00000374481 SMG5Q9UPR3 1016 aaKnown RBP10.93□□□□□ -0.66
CD28-202ENST00000374481 TNKSO95271 1327 aa10.93□□□□□ -0.66
CD28-202ENST00000374481 SALL3Q9BXA9 1300 aa10.93□□□□□ -0.66
CD28-202ENST00000374481 DAB1O75553 588 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 NR2F2P24468 414 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 YWHAGP61981 247 aaKnown RBP eCLIP10.92□□□□□ -0.66
CD28-202ENST00000374481 STAT4Q14765 748 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 NAB2Q15742 525 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 TMEM132AQ24JP5 1023 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 TAF1BQ53T94 588 aaPredicted RBP10.92□□□□□ -0.66
CD28-202ENST00000374481 ADSSL1Q8N142 457 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 TAB3Q8N5C8 712 aaPredicted RBP10.92□□□□□ -0.66
CD28-202ENST00000374481 MAGEB18Q96M61 343 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 COQ7Q99807 217 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 MRPL1Q9BYD6 325 aaKnown RBP10.92□□□□□ -0.66
CD28-202ENST00000374481 TRMT112Q9UI30 125 aaKnown RBP10.92□□□□□ -0.66
CD28-202ENST00000374481 CLTCL1P53675 1640 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 TJP3O95049 919 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 USP11P51784 963 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 CEP55Q53EZ4 464 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 GALNT17Q6IS24 598 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 IYDQ6PHW0 289 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 BTNL9Q6UXG8 535 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 TRMT1LQ7Z2T5 733 aaKnown RBP10.92□□□□□ -0.66
CD28-202ENST00000374481 RNF169Q8NCN4 708 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 OXER1Q8TDS5 423 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 ARHGEF40Q8TER5 1519 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 GOLPH3Q9H4A6 298 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 USP42Q9H9J4 1324 aaKnown RBP10.92□□□□□ -0.66
CD28-202ENST00000374481 ALG13Q9NP73 1137 aaKnown RBP10.92□□□□□ -0.66
CD28-202ENST00000374481 NMRK1Q9NWW6 199 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms