RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 TNFAIP2Q03169 654 aa17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 TRAPPC12Q8WVT3 735 aa17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 TMX1Q9H3N1 280 aa17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 NDST4Q9H3R1 872 aa17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 RRAGDQ9NQL2 400 aaPredicted RBP17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 KMT5AQ9NQR1 393 aa17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 TBX20Q9UMR3 447 aa17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 EVPLQ92817 2033 aa17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 HTTP42858 3142 aa17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 TBC1D8O95759 1140 aa17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 GNA14O95837 355 aa17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 ZNF286BP0CG31 522 aa17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 KLK7P49862 253 aa17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 IRX5P78411 483 aaPredicted RBP17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 RBL2Q08999 1139 aa17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 TMEM139Q8IV31 216 aa17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 SLC9A9Q8IVB4 645 aa17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 MAP4K3Q8IVH8 894 aa17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 CCDC150Q8NCX0 1101 aa17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 SLC17A8Q8NDX2 589 aa17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 TRPV1Q8NER1 839 aa17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 OR6J1Q8NGC5 347 aa17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 SLC7A3Q8WY07 619 aa17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 ZBTB10Q96DT7 871 aa17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 ACCSQ96QU6 501 aa17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 ERGIC2Q96RQ1 377 aa17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 TMEM206Q9H813 350 aa17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 ERAP1Q9NZ08 941 aa17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 DENND3A2RUS2 1198 aa17.23■□□□□ 0.35
NIPAL3-204ENST00000374399 HBP1O60381 514 aa17.23■□□□□ 0.35
NIPAL3-204ENST00000374399 SMTNP53814 917 aa17.23■□□□□ 0.35
NIPAL3-204ENST00000374399 FCGRTP55899 365 aa17.23■□□□□ 0.35
NIPAL3-204ENST00000374399 TBC1D8BQ0IIM8 1120 aa17.23■□□□□ 0.35
NIPAL3-204ENST00000374399 CCDC40Q4G0X9 1142 aa17.23■□□□□ 0.35
NIPAL3-204ENST00000374399 SLC39A4Q6P5W5 647 aa17.23■□□□□ 0.35
NIPAL3-204ENST00000374399 FRMD5Q7Z6J6 570 aa17.23■□□□□ 0.35
NIPAL3-204ENST00000374399 C12orf56Q8IXR9 622 aa17.23■□□□□ 0.35
NIPAL3-204ENST00000374399 CCDC155Q8N6L0 562 aa17.23■□□□□ 0.35
NIPAL3-204ENST00000374399 ZSWIM2Q8NEG5 633 aa17.23■□□□□ 0.35
NIPAL3-204ENST00000374399 HVCN1Q96D96 273 aa17.23■□□□□ 0.35
NIPAL3-204ENST00000374399 CFHR5Q9BXR6 569 aa17.23■□□□□ 0.35
NIPAL3-204ENST00000374399 A6NJR5 290 aa17.22■□□□□ 0.35
NIPAL3-204ENST00000374399 ANKRD63C9JTQ0 380 aa17.22■□□□□ 0.35
NIPAL3-204ENST00000374399 SLC16A3O15427 465 aaKnown RBP17.22■□□□□ 0.35
NIPAL3-204ENST00000374399 XRCC5P13010 732 aaKnown RBP17.22■□□□□ 0.35
NIPAL3-204ENST00000374399 YY1P25490 414 aa17.22■□□□□ 0.35
NIPAL3-204ENST00000374399 RPL13P26373 211 aaKnown RBP17.22■□□□□ 0.35
NIPAL3-204ENST00000374399 ADSSP30520 456 aa17.22■□□□□ 0.35
NIPAL3-204ENST00000374399 FXR1P51114 621 aaKnown RBP eCLIP17.22■□□□□ 0.35
NIPAL3-204ENST00000374399 ADKP55263 362 aaKnown RBP17.22■□□□□ 0.35
NIPAL3-204ENST00000374399 HS2ST1Q7LGA3 356 aa17.22■□□□□ 0.35
NIPAL3-204ENST00000374399 REM2Q8IYK8 340 aaPredicted RBP17.22■□□□□ 0.35
NIPAL3-204ENST00000374399 KIAA1524Q8TCG1 905 aa17.22■□□□□ 0.35
NIPAL3-204ENST00000374399 TRIB2Q92519 343 aa17.22■□□□□ 0.35
NIPAL3-204ENST00000374399 CBWD1Q9BRT8 395 aa17.22■□□□□ 0.35
NIPAL3-204ENST00000374399 TTYH3Q9C0H2 523 aa17.22■□□□□ 0.35
NIPAL3-204ENST00000374399 SIK3Q9Y2K2 1263 aa17.22■□□□□ 0.35
NIPAL3-204ENST00000374399 CASP8AP2Q9UKL3 1982 aa17.22■□□□□ 0.35
NIPAL3-204ENST00000374399 DYNC1LI2O43237 492 aaPredicted RBP17.21■□□□□ 0.35
NIPAL3-204ENST00000374399 INSRRP14616 1297 aa17.21■□□□□ 0.35
NIPAL3-204ENST00000374399 SFPQP23246 707 aaKnown RBP eCLIP17.21■□□□□ 0.35
NIPAL3-204ENST00000374399 NAMPTP43490 491 aa17.21■□□□□ 0.35
NIPAL3-204ENST00000374399 FLT3LGP49771 235 aa17.21■□□□□ 0.35
NIPAL3-204ENST00000374399 HTRA3P83110 453 aa17.21■□□□□ 0.35
NIPAL3-204ENST00000374399 KCNMA1Q12791 1236 aa17.21■□□□□ 0.35
NIPAL3-204ENST00000374399 CAPSQ13938 189 aa17.21■□□□□ 0.35
NIPAL3-204ENST00000374399 MYBPC2Q14324 1141 aa17.21■□□□□ 0.35
NIPAL3-204ENST00000374399 SYCP1Q15431 976 aa17.21■□□□□ 0.35
NIPAL3-204ENST00000374399 SYCP3Q8IZU3 236 aa17.21■□□□□ 0.35
NIPAL3-204ENST00000374399 C17orf53Q8N3J3 647 aaPredicted RBP17.21■□□□□ 0.35
NIPAL3-204ENST00000374399 LRRC71Q8N4P6 559 aa17.21■□□□□ 0.35
NIPAL3-204ENST00000374399 GOLGA5Q8TBA6 731 aa17.21■□□□□ 0.35
NIPAL3-204ENST00000374399 TRPC6Q9Y210 931 aa17.21■□□□□ 0.35
NIPAL3-204ENST00000374399 C22orf31O95567 290 aa17.21■□□□□ 0.35
NIPAL3-204ENST00000374399 EDN1P05305 212 aa17.21■□□□□ 0.35
NIPAL3-204ENST00000374399 CASP14P31944 242 aa17.21■□□□□ 0.35
NIPAL3-204ENST00000374399 VEGFBP49765 207 aa17.21■□□□□ 0.35
NIPAL3-204ENST00000374399 PRKCZQ05513 592 aa17.21■□□□□ 0.35
NIPAL3-204ENST00000374399 LINC01465Q8N7H1 131 aa17.21■□□□□ 0.35
NIPAL3-204ENST00000374399 PRPF31Q8WWY3 499 aaKnown RBP17.21■□□□□ 0.35
NIPAL3-204ENST00000374399 IFT74Q96LB3 600 aa17.21■□□□□ 0.35
NIPAL3-204ENST00000374399 MKNK1Q9BUB5 465 aa17.21■□□□□ 0.35
NIPAL3-204ENST00000374399 RNF186Q9NXI6 227 aa17.21■□□□□ 0.35
NIPAL3-204ENST00000374399 ARMCX3Q9UH62 379 aaPredicted RBP17.21■□□□□ 0.35
NIPAL3-204ENST00000374399 THSD7BQ9C0I4 1608 aa17.2■□□□□ 0.34
NIPAL3-204ENST00000374399 H3BRB1 525 aa17.2■□□□□ 0.34
NIPAL3-204ENST00000374399 PES1O00541 588 aaKnown RBP17.2■□□□□ 0.34
NIPAL3-204ENST00000374399 SKILP12757 684 aa17.2■□□□□ 0.34
NIPAL3-204ENST00000374399 CYP2J2P51589 502 aa17.2■□□□□ 0.34
NIPAL3-204ENST00000374399 IER5Q5VY09 327 aa17.2■□□□□ 0.34
NIPAL3-204ENST00000374399 KAT2BQ92831 832 aa17.2■□□□□ 0.34
NIPAL3-204ENST00000374399 SLC35C1Q96A29 364 aa17.2■□□□□ 0.34
NIPAL3-204ENST00000374399 TUT1Q9H6E5 874 aaKnown RBP17.2■□□□□ 0.34
NIPAL3-204ENST00000374399 EPHB6O15197 1021 aa17.19■□□□□ 0.34
NIPAL3-204ENST00000374399 MFAP3LO75121 409 aa17.19■□□□□ 0.34
NIPAL3-204ENST00000374399 CYBAP13498 195 aa17.19■□□□□ 0.34
NIPAL3-204ENST00000374399 CNGA1P29973 690 aa17.19■□□□□ 0.34
NIPAL3-204ENST00000374399 PSMC2P35998 433 aaKnown RBP17.19■□□□□ 0.34
NIPAL3-204ENST00000374399 MCCD1P59942 119 aaPredicted RBP17.19■□□□□ 0.34
NIPAL3-204ENST00000374399 SNRPFP62306 86 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms