RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 AMPD3Q01432 767 aa13.93□□□□□ -0.18
PRPF4-201ENST00000374198 LRRC63Q05C16 580 aa13.93□□□□□ -0.18
PRPF4-201ENST00000374198 IFIT1BQ5T764 474 aaKnown RBP13.93□□□□□ -0.18
PRPF4-201ENST00000374198 CABP7Q86V35 215 aa13.93□□□□□ -0.18
PRPF4-201ENST00000374198 MYLK4Q86YV6 388 aaPredicted RBP13.93□□□□□ -0.18
PRPF4-201ENST00000374198 CCNJLQ8IV13 435 aa13.93□□□□□ -0.18
PRPF4-201ENST00000374198 RBM17Q96I25 401 aaKnown RBP13.93□□□□□ -0.18
PRPF4-201ENST00000374198 ZSCAN10Q96SZ4 725 aaPredicted RBP13.93□□□□□ -0.18
PRPF4-201ENST00000374198 MYLK2Q9H1R3 596 aa13.93□□□□□ -0.18
PRPF4-201ENST00000374198 STOML1Q9UBI4 398 aa13.93□□□□□ -0.18
PRPF4-201ENST00000374198 TTC7AQ9ULT0 858 aaPredicted RBP13.93□□□□□ -0.18
PRPF4-201ENST00000374198 USP20Q9Y2K6 914 aa13.93□□□□□ -0.18
PRPF4-201ENST00000374198 SNX24Q9Y343 169 aa13.93□□□□□ -0.18
PRPF4-201ENST00000374198 FAM187AA6NFU0 413 aa13.92□□□□□ -0.18
PRPF4-201ENST00000374198 NBPF26B4DH59 902 aa13.92□□□□□ -0.18
PRPF4-201ENST00000374198 ATP9AO75110 1047 aa13.92□□□□□ -0.18
PRPF4-201ENST00000374198 ENTPD5O75356 428 aa13.92□□□□□ -0.18
PRPF4-201ENST00000374198 LMNAP02545 664 aaKnown RBP13.92□□□□□ -0.18
PRPF4-201ENST00000374198 CALM1P0DP23 149 aa13.92□□□□□ -0.18
PRPF4-201ENST00000374198 CALM2P0DP24 149 aa13.92□□□□□ -0.18
PRPF4-201ENST00000374198 CALM3P0DP25 149 aa13.92□□□□□ -0.18
PRPF4-201ENST00000374198 DRG2P55039 364 aaKnown RBP13.92□□□□□ -0.18
PRPF4-201ENST00000374198 KIAA1755Q5JYT7 1200 aa13.92□□□□□ -0.18
PRPF4-201ENST00000374198 INTS8Q75QN2 995 aaKnown RBP13.92□□□□□ -0.18
PRPF4-201ENST00000374198 VSIG1Q86XK7 387 aa13.92□□□□□ -0.18
PRPF4-201ENST00000374198 SRBD1Q8N5C6 995 aaKnown RBP13.92□□□□□ -0.18
PRPF4-201ENST00000374198 NBPF15Q8N660 670 aa13.92□□□□□ -0.18
PRPF4-201ENST00000374198 SEC63Q9UGP8 760 aaKnown RBP13.92□□□□□ -0.18
PRPF4-201ENST00000374198 TMCO1Q9UM00 188 aa13.92□□□□□ -0.18
PRPF4-201ENST00000374198 MAGEA13PA6NCF6 341 aa13.92□□□□□ -0.18
PRPF4-201ENST00000374198 TJP3O95049 919 aa13.92□□□□□ -0.18
PRPF4-201ENST00000374198 ECEL1O95672 775 aa13.92□□□□□ -0.18
PRPF4-201ENST00000374198 VEGFAP15692 232 aaPredicted RBP13.92□□□□□ -0.18
PRPF4-201ENST00000374198 GNAT2P19087 354 aa13.92□□□□□ -0.18
PRPF4-201ENST00000374198 ABCD1P33897 745 aa13.92□□□□□ -0.18
PRPF4-201ENST00000374198 PHKA1P46020 1223 aa13.92□□□□□ -0.18
PRPF4-201ENST00000374198 IFIT5Q13325 482 aaKnown RBP13.92□□□□□ -0.18
PRPF4-201ENST00000374198 DBN1Q16643 649 aa13.92□□□□□ -0.18
PRPF4-201ENST00000374198 VSTM1Q6UX27 236 aa13.92□□□□□ -0.18
PRPF4-201ENST00000374198 HOMEZQ8IX15 550 aa13.92□□□□□ -0.18
PRPF4-201ENST00000374198 BLIDQ8IZY5 108 aa13.92□□□□□ -0.18
PRPF4-201ENST00000374198 LCORLQ8N3X6 602 aa13.92□□□□□ -0.18
PRPF4-201ENST00000374198 LRRC8CQ8TDW0 803 aa13.92□□□□□ -0.18
PRPF4-201ENST00000374198 NCSTNQ92542 709 aa13.92□□□□□ -0.18
PRPF4-201ENST00000374198 SLC4A9Q96Q91 983 aa13.92□□□□□ -0.18
PRPF4-201ENST00000374198 TGS1Q96RS0 853 aaKnown RBP13.92□□□□□ -0.18
PRPF4-201ENST00000374198 TBC1D10AQ9BXI6 508 aa13.92□□□□□ -0.18
PRPF4-201ENST00000374198 DENND2DQ9H6A0 471 aaPredicted RBP13.92□□□□□ -0.18
PRPF4-201ENST00000374198 PDP2Q9P2J9 529 aa13.92□□□□□ -0.18
PRPF4-201ENST00000374198 HAO1Q9UJM8 370 aa13.92□□□□□ -0.18
PRPF4-201ENST00000374198 ZNF232Q9UNY5 417 aa13.92□□□□□ -0.18
PRPF4-201ENST00000374198 FAM205AQ6ZU69 1335 aa13.91□□□□□ -0.18
PRPF4-201ENST00000374198 KIAA0391O15091 583 aaKnown RBP13.91□□□□□ -0.18
PRPF4-201ENST00000374198 GNPATO15228 680 aa13.91□□□□□ -0.18
PRPF4-201ENST00000374198 RIPK2O43353 540 aa13.91□□□□□ -0.18
PRPF4-201ENST00000374198 TARSP26639 723 aaKnown RBP13.91□□□□□ -0.18
PRPF4-201ENST00000374198 PPP2R5EQ16537 467 aa13.91□□□□□ -0.18
PRPF4-201ENST00000374198 NT5DC3Q86UY8 548 aa13.91□□□□□ -0.18
PRPF4-201ENST00000374198 ARHGAP18Q8N392 663 aa13.91□□□□□ -0.18
PRPF4-201ENST00000374198 GUF1Q8N442 669 aaKnown RBP13.91□□□□□ -0.18
PRPF4-201ENST00000374198 CFAP61Q8NHU2 1237 aa13.91□□□□□ -0.18
PRPF4-201ENST00000374198 GLG1Q92896 1179 aa13.91□□□□□ -0.18
PRPF4-201ENST00000374198 GATA6Q92908 595 aa13.91□□□□□ -0.18
PRPF4-201ENST00000374198 HES6Q96HZ4 224 aa13.91□□□□□ -0.18
PRPF4-201ENST00000374198 MLXIPLQ9NP71 852 aa13.91□□□□□ -0.18
PRPF4-201ENST00000374198 RPL26L1Q9UNX3 145 aaKnown RBP13.91□□□□□ -0.18
PRPF4-201ENST00000374198 SLC4A7Q9Y6M7 1214 aa13.91□□□□□ -0.18
PRPF4-201ENST00000374198 TAF1LQ8IZX4 1826 aa13.91□□□□□ -0.18
PRPF4-201ENST00000374198 CASZ1Q86V15 1759 aa13.91□□□□□ -0.18
PRPF4-201ENST00000374198 ECE2O60344 883 aa13.91□□□□□ -0.18
PRPF4-201ENST00000374198 EYA4O95677 639 aa13.91□□□□□ -0.18
PRPF4-201ENST00000374198 OCRLQ01968 901 aa13.91□□□□□ -0.18
PRPF4-201ENST00000374198 PTK2Q05397 1052 aa13.91□□□□□ -0.18
PRPF4-201ENST00000374198 MCL1Q07820 350 aa13.91□□□□□ -0.18
PRPF4-201ENST00000374198 SETDB1Q15047 1291 aa13.91□□□□□ -0.18
PRPF4-201ENST00000374198 MTFR1Q15390 333 aa13.91□□□□□ -0.18
PRPF4-201ENST00000374198 PFKFB3Q16875 520 aaPredicted RBP13.91□□□□□ -0.18
PRPF4-201ENST00000374198 OTUD6AQ7L8S5 288 aa13.91□□□□□ -0.18
PRPF4-201ENST00000374198 DNAAF5Q86Y56 855 aa13.91□□□□□ -0.18
PRPF4-201ENST00000374198 ANKRD42Q8N9B4 389 aa13.91□□□□□ -0.18
PRPF4-201ENST00000374198 GDAP1Q8TB36 358 aa13.91□□□□□ -0.18
PRPF4-201ENST00000374198 ARHGEF2Q92974 986 aaKnown RBP13.91□□□□□ -0.18
PRPF4-201ENST00000374198 GRAMD1AQ96CP6 724 aa13.91□□□□□ -0.18
PRPF4-201ENST00000374198 FAM163AQ96GL9 167 aaPredicted RBP13.91□□□□□ -0.18
PRPF4-201ENST00000374198 ZBTB3Q9H5J0 574 aa13.91□□□□□ -0.18
PRPF4-201ENST00000374198 ABCF2Q9UG63 623 aa13.91□□□□□ -0.18
PRPF4-201ENST00000374198 LRP5O75197 1615 aa13.9□□□□□ -0.18
PRPF4-201ENST00000374198 MYH4Q9Y623 1939 aa13.9□□□□□ -0.18
PRPF4-201ENST00000374198 CREB1P16220 341 aa13.9□□□□□ -0.18
PRPF4-201ENST00000374198 FGFR4P22455 802 aa13.9□□□□□ -0.18
PRPF4-201ENST00000374198 CALML3P27482 149 aa13.9□□□□□ -0.18
PRPF4-201ENST00000374198 EPHB2P29323 1055 aa13.9□□□□□ -0.18
PRPF4-201ENST00000374198 CNPY1Q3B7I2 92 aa13.9□□□□□ -0.18
PRPF4-201ENST00000374198 JAMLQ86YT9 394 aa13.9□□□□□ -0.18
PRPF4-201ENST00000374198 SYCE1Q8N0S2 351 aa13.9□□□□□ -0.18
PRPF4-201ENST00000374198 TTLL11Q8NHH1 800 aa13.9□□□□□ -0.18
PRPF4-201ENST00000374198 ERP27Q96DN0 273 aa13.9□□□□□ -0.18
PRPF4-201ENST00000374198 ROPN1BQ9BZX4 212 aaPredicted RBP13.9□□□□□ -0.18
PRPF4-201ENST00000374198 ROPN1Q9HAT0 212 aaPredicted RBP13.9□□□□□ -0.18
PRPF4-201ENST00000374198 TCP11L1Q9NUJ3 509 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms