RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 ZNF365Q70YC5 407 aa20.53■□□□□ 0.88
CDX4-201ENST00000373514 FSIP1Q8NA03 581 aa20.53■□□□□ 0.88
CDX4-201ENST00000373514 STAMQ92783 540 aa20.53■□□□□ 0.88
CDX4-201ENST00000373514 PRO3102Q9H379 93 aa20.53■□□□□ 0.88
CDX4-201ENST00000373514 NOC2LQ9Y3T9 749 aaKnown RBP20.53■□□□□ 0.88
CDX4-201ENST00000373514 POLR2DO15514 142 aaKnown RBP20.53■□□□□ 0.88
CDX4-201ENST00000373514 CMA1P23946 247 aa20.53■□□□□ 0.88
CDX4-201ENST00000373514 PLEKHG4Q58EX7 1191 aa20.53■□□□□ 0.88
CDX4-201ENST00000373514 CAVIN1Q6NZI2 390 aaKnown RBP20.53■□□□□ 0.88
CDX4-201ENST00000373514 OTOP2Q7RTS6 562 aa20.53■□□□□ 0.88
CDX4-201ENST00000373514 FAM228AQ86W67 206 aa20.53■□□□□ 0.88
CDX4-201ENST00000373514 RNF149Q8NC42 400 aa20.53■□□□□ 0.88
CDX4-201ENST00000373514 DBF4BQ8NFT6 615 aa20.53■□□□□ 0.88
CDX4-201ENST00000373514 REEP2Q9BRK0 252 aa20.53■□□□□ 0.88
CDX4-201ENST00000373514 IFIH1Q9BYX4 1025 aaKnown RBP20.53■□□□□ 0.88
CDX4-201ENST00000373514 IFT122Q9HBG6 1241 aa20.53■□□□□ 0.88
CDX4-201ENST00000373514 KCNH3Q9ULD8 1083 aa20.53■□□□□ 0.88
CDX4-201ENST00000373514 HPSEQ9Y251 543 aa20.53■□□□□ 0.88
CDX4-201ENST00000373514 A0A1W2PQ27 194 aa20.52■□□□□ 0.87
CDX4-201ENST00000373514 A0A1W2PQ64 194 aa20.52■□□□□ 0.87
CDX4-201ENST00000373514 A0A1W2PQD8 194 aa20.52■□□□□ 0.87
CDX4-201ENST00000373514 PARNO95453 639 aaKnown RBP20.52■□□□□ 0.87
CDX4-201ENST00000373514 NDUFA8P51970 172 aa20.52■□□□□ 0.87
CDX4-201ENST00000373514 SHHQ15465 462 aa20.52■□□□□ 0.87
CDX4-201ENST00000373514 PSRC1Q6PGN9 363 aaPredicted RBP20.52■□□□□ 0.87
CDX4-201ENST00000373514 MRPS27Q92552 414 aaKnown RBP20.52■□□□□ 0.87
CDX4-201ENST00000373514 KIFC3Q9BVG8 833 aa20.52■□□□□ 0.87
CDX4-201ENST00000373514 GZF1Q9H116 711 aaPredicted RBP20.52■□□□□ 0.87
CDX4-201ENST00000373514 MINDY3Q9H8M7 445 aa20.52■□□□□ 0.87
CDX4-201ENST00000373514 LRRIQ4A6NIV6 560 aa20.51■□□□□ 0.87
CDX4-201ENST00000373514 SFI1A8K8P3 1242 aa20.51■□□□□ 0.87
CDX4-201ENST00000373514 PFKMP08237 780 aa20.51■□□□□ 0.87
CDX4-201ENST00000373514 DARSP14868 501 aaKnown RBP20.51■□□□□ 0.87
CDX4-201ENST00000373514 GUCY2CP25092 1073 aa20.51■□□□□ 0.87
CDX4-201ENST00000373514 PAK2Q13177 524 aa20.51■□□□□ 0.87
CDX4-201ENST00000373514 CNKSR3Q6P9H4 555 aa20.51■□□□□ 0.87
CDX4-201ENST00000373514 DYMQ7RTS9 669 aa20.51■□□□□ 0.87
CDX4-201ENST00000373514 ZNF410Q86VK4 478 aa20.51■□□□□ 0.87
CDX4-201ENST00000373514 RPUSD2Q8IZ73 545 aaKnown RBP20.51■□□□□ 0.87
CDX4-201ENST00000373514 CXXC1Q9P0U4 656 aaPredicted RBP20.51■□□□□ 0.87
CDX4-201ENST00000373514 PADI3Q9ULW8 664 aa20.51■□□□□ 0.87
CDX4-201ENST00000373514 ADGRA3Q8IWK6 1321 aa20.51■□□□□ 0.87
CDX4-201ENST00000373514 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.5■□□□□ 0.87
CDX4-201ENST00000373514 MYMKA6NI61 221 aa20.5■□□□□ 0.87
CDX4-201ENST00000373514 RPS6KA5O75582 802 aa20.5■□□□□ 0.87
CDX4-201ENST00000373514 EIF4BP23588 611 aaKnown RBP20.5■□□□□ 0.87
CDX4-201ENST00000373514 MXD4Q14582 209 aaPredicted RBP20.5■□□□□ 0.87
CDX4-201ENST00000373514 GRAMD1CQ8IYS0 662 aa20.5■□□□□ 0.87
CDX4-201ENST00000373514 ERVK-5Q9HDB9 667 aa20.5■□□□□ 0.87
CDX4-201ENST00000373514 SERTAD1Q9UHV2 236 aa20.5■□□□□ 0.87
CDX4-201ENST00000373514 COLQQ9Y215 455 aaPredicted RBP20.5■□□□□ 0.87
CDX4-201ENST00000373514 ACTN4O43707 911 aaKnown RBP20.49■□□□□ 0.87
CDX4-201ENST00000373514 FGBP02675 491 aa20.49■□□□□ 0.87
CDX4-201ENST00000373514 KRT18P05783 430 aaKnown RBP20.49■□□□□ 0.87
CDX4-201ENST00000373514 LIG1P18858 919 aa20.49■□□□□ 0.87
CDX4-201ENST00000373514 NFX1Q12986 1120 aaKnown RBP20.49■□□□□ 0.87
CDX4-201ENST00000373514 GIT2Q14161 759 aa20.49■□□□□ 0.87
CDX4-201ENST00000373514 SV2BQ7L1I2 683 aa20.49■□□□□ 0.87
CDX4-201ENST00000373514 IQUBQ8NA54 791 aa20.49■□□□□ 0.87
CDX4-201ENST00000373514 LINC01599Q8WXQ3 324 aa20.49■□□□□ 0.87
CDX4-201ENST00000373514 SEPT8Q92599 483 aa20.49■□□□□ 0.87
CDX4-201ENST00000373514 KIFAP3Q92845 792 aa20.49■□□□□ 0.87
CDX4-201ENST00000373514 DRC1Q96MC2 740 aa20.49■□□□□ 0.87
CDX4-201ENST00000373514 GCOM2Q9BZD3 368 aaPredicted RBP20.49■□□□□ 0.87
CDX4-201ENST00000373514 TMX1Q9H3N1 280 aa20.49■□□□□ 0.87
CDX4-201ENST00000373514 KCND2Q9NZV8 630 aa20.49■□□□□ 0.87
CDX4-201ENST00000373514 TMEM63CQ9P1W3 806 aa20.49■□□□□ 0.87
CDX4-201ENST00000373514 ST3GAL5Q9UNP4 418 aa20.49■□□□□ 0.87
CDX4-201ENST00000373514 RANBP2P49792 3224 aaKnown RBP20.49■□□□□ 0.87
CDX4-201ENST00000373514 FAM237AA0A1B0GTK4 181 aa20.48■□□□□ 0.87
CDX4-201ENST00000373514 ZBBXA8MT70 800 aa20.48■□□□□ 0.87
CDX4-201ENST00000373514 ASAP2O43150 1006 aa20.48■□□□□ 0.87
CDX4-201ENST00000373514 MGEA5O60502 916 aa20.48■□□□□ 0.87
CDX4-201ENST00000373514 CASP1P29466 404 aa20.48■□□□□ 0.87
CDX4-201ENST00000373514 BMP8BP34820 402 aa20.48■□□□□ 0.87
CDX4-201ENST00000373514 TFDP1Q14186 410 aa20.48■□□□□ 0.87
CDX4-201ENST00000373514 DDX12PQ92771 950 aa20.48■□□□□ 0.87
CDX4-201ENST00000373514 RNPC3Q96LT9 517 aaKnown RBP20.48■□□□□ 0.87
CDX4-201ENST00000373514 SQORQ9Y6N5 450 aa20.48■□□□□ 0.87
CDX4-201ENST00000373514 SYKP43405 635 aa20.48■□□□□ 0.87
CDX4-201ENST00000373514 PHKA2P46019 1235 aa20.48■□□□□ 0.87
CDX4-201ENST00000373514 PEX3P56589 373 aa20.48■□□□□ 0.87
CDX4-201ENST00000373514 PTENP60484 403 aa20.48■□□□□ 0.87
CDX4-201ENST00000373514 CDCA2Q69YH5 1023 aaPredicted RBP20.48■□□□□ 0.87
CDX4-201ENST00000373514 HERVK_113Q902F9 699 aa20.48■□□□□ 0.87
CDX4-201ENST00000373514 SYAP1Q96A49 352 aaPredicted RBP20.48■□□□□ 0.87
CDX4-201ENST00000373514 CUEDC2Q9H467 287 aa20.48■□□□□ 0.87
CDX4-201ENST00000373514 EDN1P05305 212 aa20.47■□□□□ 0.87
CDX4-201ENST00000373514 NAMPTP43490 491 aa20.47■□□□□ 0.87
CDX4-201ENST00000373514 NPTX2P47972 431 aa20.47■□□□□ 0.87
CDX4-201ENST00000373514 DEFB103AP81534 67 aa20.47■□□□□ 0.87
CDX4-201ENST00000373514 CDC42EP1Q00587 391 aa20.47■□□□□ 0.87
CDX4-201ENST00000373514 MBTD1Q05BQ5 628 aa20.47■□□□□ 0.87
CDX4-201ENST00000373514 LONRF3Q496Y0 759 aa20.47■□□□□ 0.87
CDX4-201ENST00000373514 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.47■□□□□ 0.87
CDX4-201ENST00000373514 TMCO2Q7Z6W1 182 aaPredicted RBP20.47■□□□□ 0.87
CDX4-201ENST00000373514 TDHQ8IZJ6 230 aa20.47■□□□□ 0.87
CDX4-201ENST00000373514 USP38Q8NB14 1042 aa20.47■□□□□ 0.87
CDX4-201ENST00000373514 DNAJC19Q96DA6 116 aa20.47■□□□□ 0.87
CDX4-201ENST00000373514 TIPINQ9BVW5 301 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms