RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 WTIPA6NIX2 430 aaPredicted RBP8.88□□□□□ -0.99
GARNL3-201ENST00000373386 RNF225M0QZC1 329 aaPredicted RBP8.88□□□□□ -0.99
GARNL3-201ENST00000373386 CYTH3O43739 400 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 KRT86O43790 486 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 PFDN1O60925 122 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 RNF40O75150 1001 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 USP17L8P0C7I0 530 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 FUT4P22083 530 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 CCNE1P24864 410 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 FXR2P51116 673 aaKnown RBP eCLIP8.88□□□□□ -0.99
GARNL3-201ENST00000373386 BNIP1Q12981 228 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 NONOQ15233 471 aaKnown RBP eCLIP8.88□□□□□ -0.99
GARNL3-201ENST00000373386 SVIPQ8NHG7 77 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 STAMQ92783 540 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 C1orf74Q96LT6 269 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 GPR101Q96P66 508 aaPredicted RBP8.88□□□□□ -0.99
GARNL3-201ENST00000373386 ERGIC2Q96RQ1 377 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 CHP1Q99653 195 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 RIOX1Q9H6W3 641 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 KMT5AQ9NQR1 393 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 MYPNQ86TC9 1320 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 LUC7L3O95232 432 aaKnown RBP8.87□□□□□ -0.99
GARNL3-201ENST00000373386 LINGO3P0C6S8 592 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 POTEIP0CG38 1075 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 CYLC1P35663 651 aaPredicted RBP8.87□□□□□ -0.99
GARNL3-201ENST00000373386 PSMC4P43686 418 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 MRPL28Q13084 256 aaKnown RBP8.87□□□□□ -0.99
GARNL3-201ENST00000373386 CCDC155Q8N6L0 562 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 APPL2Q8NEU8 664 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 SH3RF3Q8TEJ3 882 aaPredicted RBP8.87□□□□□ -0.99
GARNL3-201ENST00000373386 TFCP2L1Q9NZI6 479 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 HPCAL4Q9UM19 191 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 GOLGA6L7A0A1B0GV03 622 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 hCG_1642624A0A1W2PR95 340 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 TTC26A0AVF1 554 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 ANO9A1A5B4 782 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 HTR3EA5X5Y0 456 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 SNHG28P0DPA3 235 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 CNGA1P29973 690 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 SHROOM1Q2M3G4 852 aaPredicted RBP8.87□□□□□ -0.99
GARNL3-201ENST00000373386 SLC35G1Q2M3R5 365 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 PPP1R15BQ5SWA1 713 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 TYW1BQ6NUM6 668 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 NEK8Q86SG6 692 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 VPS52Q8N1B4 723 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 RRP36Q96EU6 259 aaKnown RBP8.87□□□□□ -0.99
GARNL3-201ENST00000373386 SPATA17Q96L03 361 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 EDEM3Q9BZQ6 932 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 BHMT2Q9H2M3 363 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 CENPHQ9H3R5 247 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 HDAC9Q9UKV0 1011 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 POTEFA5A3E0 1075 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 TSPAN1O60635 241 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 COBLO75128 1261 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 PHACTR2O75167 634 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 HERVK_113P62684 666 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 IFFO1Q0D2I5 559 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 TAF11Q15544 211 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 ASPRV1Q53RT3 343 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 GRAMD2AQ8IUY3 354 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 COG1Q8WTW3 980 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 P2RX5Q93086 422 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 PURBQ96QR8 312 aaKnown RBP8.87□□□□□ -0.99
GARNL3-201ENST00000373386 UQCC2Q9BRT2 126 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 TRIM9Q9C026 710 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 ABCG4Q9H172 646 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 PLEKHA4Q9H4M7 779 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 MTUS1Q9ULD2 1270 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 LZTS1Q9Y250 596 aa8.87□□□□□ -0.99
GARNL3-201ENST00000373386 NRXN2Q9P2S2 1712 aa8.86□□□□□ -0.99
GARNL3-201ENST00000373386 KLRG2A4D1S0 409 aaPredicted RBP8.86□□□□□ -0.99
GARNL3-201ENST00000373386 SNX2O60749 519 aa8.86□□□□□ -0.99
GARNL3-201ENST00000373386 RASSF9O75901 435 aa8.86□□□□□ -0.99
GARNL3-201ENST00000373386 PRPF6O94906 941 aaKnown RBP8.86□□□□□ -0.99
GARNL3-201ENST00000373386 LCA5LO95447 670 aa8.86□□□□□ -0.99
GARNL3-201ENST00000373386 SYF2O95926 243 aaKnown RBP8.86□□□□□ -0.99
GARNL3-201ENST00000373386 ATP1A1P05023 1023 aaKnown RBP8.86□□□□□ -0.99
GARNL3-201ENST00000373386 BTF3P20290 206 aaKnown RBP8.86□□□□□ -0.99
GARNL3-201ENST00000373386 ATP4AP20648 1035 aa8.86□□□□□ -0.99
GARNL3-201ENST00000373386 ALDH3A1P30838 453 aa8.86□□□□□ -0.99
GARNL3-201ENST00000373386 TSPAN7P41732 249 aa8.86□□□□□ -0.99
GARNL3-201ENST00000373386 UBXN2AP68543 259 aa8.86□□□□□ -0.99
GARNL3-201ENST00000373386 IKQ13123 557 aaPredicted RBP8.86□□□□□ -0.99
GARNL3-201ENST00000373386 CCDC40Q4G0X9 1142 aa8.86□□□□□ -0.99
GARNL3-201ENST00000373386 GKAP1Q5VSY0 366 aaPredicted RBP8.86□□□□□ -0.99
GARNL3-201ENST00000373386 CABP7Q86V35 215 aa8.86□□□□□ -0.99
GARNL3-201ENST00000373386 TXNRD3Q86VQ6 643 aa8.86□□□□□ -0.99
GARNL3-201ENST00000373386 FLCNQ8NFG4 579 aa8.86□□□□□ -0.99
GARNL3-201ENST00000373386 DDX27Q96GQ7 796 aaKnown RBP8.86□□□□□ -0.99
GARNL3-201ENST00000373386 MTMR9Q96QG7 549 aa8.86□□□□□ -0.99
GARNL3-201ENST00000373386 MMS19Q96T76 1030 aa8.86□□□□□ -0.99
GARNL3-201ENST00000373386 PARVGQ9HBI0 331 aa8.86□□□□□ -0.99
GARNL3-201ENST00000373386 SPC25Q9HBM1 224 aa8.86□□□□□ -0.99
GARNL3-201ENST00000373386 TRIM10Q9UDY6 481 aa8.86□□□□□ -0.99
GARNL3-201ENST00000373386 GDAQ9Y2T3 454 aa8.86□□□□□ -0.99
GARNL3-201ENST00000373386 IGKV6D-41A0A0C4DH26 115 aa8.86□□□□□ -0.99
GARNL3-201ENST00000373386 KLRF2D3W0D1 207 aa8.86□□□□□ -0.99
GARNL3-201ENST00000373386 GNPATO15228 680 aa8.86□□□□□ -0.99
GARNL3-201ENST00000373386 CDK8P49336 464 aa8.86□□□□□ -0.99
GARNL3-201ENST00000373386 CENPPQ6IPU0 288 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms