RNA–Protein interactions for RNA: ENST00000373193.7

PTPRT-205, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-205ENST00000373193 ABCC12Q96J65 1359 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 MED7O43513 233 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 RGS5O15539 181 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 SMNDC1O75940 238 aaKnown RBP eCLIP9.82□□□□□ -0.844e-23■■■■■ 82.8
PTPRT-205ENST00000373193 BFSP2Q13515 415 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 C19orf44Q9H6X5 657 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 USP27XA6NNY8 438 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 LRRC74AQ0VAA2 488 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 FBXO31Q5XUX0 539 aaPredicted RBP9.82□□□□□ -0.84
PTPRT-205ENST00000373193 NAIF1Q69YI7 327 aaPredicted RBP9.82□□□□□ -0.84
PTPRT-205ENST00000373193 C1orf228Q6PIY5 440 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 RSPH10B2B2RC85 870 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 RSPH10BP0C881 870 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 PDIA2Q13087 525 aaKnown RBP9.82□□□□□ -0.84
PTPRT-205ENST00000373193 TRIP10Q15642 601 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 RRM2BQ7LG56 351 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 C8orf37Q96NL8 207 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 WDR7Q9Y4E6 1490 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 ERBB4Q15303 1308 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 PHF20L1A8MW92 1017 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 E5RI56 91 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 CYTH3O43739 400 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 KRT38O76015 456 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 ZNF274Q96GC6 653 aaPredicted RBP9.82□□□□□ -0.84
PTPRT-205ENST00000373193 VPS50Q96JG6 964 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 NUP85Q9BW27 656 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 TNKSO95271 1327 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 USP17L12C9JPN9 530 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 USP17L21D6R901 530 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 AIM2O14862 343 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 SRGAP2CP0DJJ0 459 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 NCAPG2Q86XI2 1143 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 TEX2Q8IWB9 1127 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 ARL10Q8N8L6 244 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 PNMA1Q8ND90 353 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 ZNF212Q9UDV6 495 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 KRT87PA6NCN2 255 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 ANGPT2O15123 496 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 METTL23Q86XA0 190 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 TRIM39Q9HCM9 518 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 AGRPO00253 132 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 PIK3R2O00459 728 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 MKRN4PQ13434 485 aaPredicted RBP9.82□□□□□ -0.84
PTPRT-205ENST00000373193 ZNF467Q7Z7K2 595 aaPredicted RBP9.82□□□□□ -0.84
PTPRT-205ENST00000373193 RNF139Q8WU17 664 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 SCNN1DP51172 638 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 STXBP2Q15833 593 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 FAM162AQ96A26 154 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 C17orf80Q9BSJ5 609 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 EPN3Q9H201 632 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 MED23Q9ULK4 1368 aa9.82□□□□□ -0.84
PTPRT-205ENST00000373193 PLCG1P19174 1290 aa9.81□□□□□ -0.84
PTPRT-205ENST00000373193 NR1H3Q13133 447 aa9.81□□□□□ -0.84
PTPRT-205ENST00000373193 DSCC1Q9BVC3 393 aa9.81□□□□□ -0.84
PTPRT-205ENST00000373193 KCNG1Q9UIX4 513 aa9.81□□□□□ -0.84
PTPRT-205ENST00000373193 RGS12O14924 1447 aa9.81□□□□□ -0.84
PTPRT-205ENST00000373193 ASAP2O43150 1006 aa9.81□□□□□ -0.84
PTPRT-205ENST00000373193 THTPAQ9BU02 230 aa9.81□□□□□ -0.84
PTPRT-205ENST00000373193 RNF14Q9UBS8 474 aa9.81□□□□□ -0.84
PTPRT-205ENST00000373193 TBC1D9BQ66K14 1250 aa9.81□□□□□ -0.84
PTPRT-205ENST00000373193 TRIM71Q2Q1W2 868 aaKnown RBP9.81□□□□□ -0.84
PTPRT-205ENST00000373193 OR8H2Q8N162 312 aa9.81□□□□□ -0.84
PTPRT-205ENST00000373193 ZNF710Q8N1W2 664 aa9.81□□□□□ -0.84
PTPRT-205ENST00000373193 SLFNL1Q499Z3 407 aa9.81□□□□□ -0.84
PTPRT-205ENST00000373193 COBLL1Q53SF7 1204 aa9.81□□□□□ -0.84
PTPRT-205ENST00000373193 KIF14Q15058 1648 aa9.81□□□□□ -0.84
PTPRT-205ENST00000373193 IGF2BP3O00425 579 aaKnown RBP eCLIP9.81□□□□□ -0.84
PTPRT-205ENST00000373193 ATP1A4Q13733 1029 aa9.81□□□□□ -0.84
PTPRT-205ENST00000373193 PCDHA1Q9Y5I3 950 aa9.81□□□□□ -0.84
PTPRT-205ENST00000373193 FBXO11Q86XK2 927 aa9.81□□□□□ -0.84
PTPRT-205ENST00000373193 KLHL11Q9NVR0 708 aa9.81□□□□□ -0.84
PTPRT-205ENST00000373193 RNF103O00237 685 aa9.81□□□□□ -0.84
PTPRT-205ENST00000373193 CD2BP2O95400 341 aaKnown RBP9.81□□□□□ -0.84
PTPRT-205ENST00000373193 ZBED6P86452 979 aa9.81□□□□□ -0.84
PTPRT-205ENST00000373193 MICU2Q8IYU8 434 aa9.81□□□□□ -0.84
PTPRT-205ENST00000373193 RNF25Q96BH1 459 aaPredicted RBP9.81□□□□□ -0.84
PTPRT-205ENST00000373193 C20orf96Q9NUD7 363 aaPredicted RBP9.81□□□□□ -0.84
PTPRT-205ENST00000373193 SPATA21Q7Z572 469 aa9.81□□□□□ -0.84
PTPRT-205ENST00000373193 ZNF473Q8WTR7 871 aaKnown RBP9.81□□□□□ -0.84
PTPRT-205ENST00000373193 DDX47Q9H0S4 455 aaKnown RBP9.81□□□□□ -0.84
PTPRT-205ENST00000373193 CUEDC2Q9H467 287 aa9.81□□□□□ -0.84
PTPRT-205ENST00000373193 DMAP1Q9NPF5 467 aaPredicted RBP9.81□□□□□ -0.84
PTPRT-205ENST00000373193 NDFIP2Q9NV92 336 aa9.81□□□□□ -0.84
PTPRT-205ENST00000373193 SYNGAP1Q96PV0 1343 aa9.81□□□□□ -0.84
PTPRT-205ENST00000373193 KDELC2Q7Z4H8 507 aa9.81□□□□□ -0.84
PTPRT-205ENST00000373193 UXS1Q8NBZ7 420 aa9.81□□□□□ -0.84
PTPRT-205ENST00000373193 C1orf54Q8WWF1 131 aa9.81□□□□□ -0.84
PTPRT-205ENST00000373193 ADAMTS1Q9UHI8 967 aa9.81□□□□□ -0.84
PTPRT-205ENST00000373193 CCDC60Q8IWA6 550 aaPredicted RBP9.8□□□□□ -0.84
PTPRT-205ENST00000373193 OSBPL9Q96SU4 736 aa9.8□□□□□ -0.84
PTPRT-205ENST00000373193 C5orf58C9J3I9 102 aa9.8□□□□□ -0.84
PTPRT-205ENST00000373193 CHN1P15882 459 aa9.8□□□□□ -0.84
PTPRT-205ENST00000373193 IFT43Q96FT9 208 aa9.8□□□□□ -0.84
PTPRT-205ENST00000373193 OTUB1Q96FW1 271 aaPredicted RBP9.8□□□□□ -0.84
PTPRT-205ENST00000373193 KIF2CQ99661 725 aa9.8□□□□□ -0.84
PTPRT-205ENST00000373193 SPRTNQ9H040 489 aaPredicted RBP9.8□□□□□ -0.84
PTPRT-205ENST00000373193 USP19O94966 1318 aa9.8□□□□□ -0.84
PTPRT-205ENST00000373193 ZNF189O75820 626 aaPredicted RBP9.8□□□□□ -0.84
PTPRT-205ENST00000373193 GUCA1CO95843 209 aa9.8□□□□□ -0.84
PTPRT-205ENST00000373193 KLHL38Q2WGJ6 581 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms