RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 POLR3CQ9BUI4 534 aaPredicted RBP25.28■■□□□ 1.64
COL9A2-201ENST00000372736 XIRP2A4UGR9 3374 aa25.28■■□□□ 1.64
COL9A2-201ENST00000372736 BRWD1Q9NSI6 2320 aa25.28■■□□□ 1.64
COL9A2-201ENST00000372736 A0A087WWV3 80 aa25.27■■□□□ 1.64
COL9A2-201ENST00000372736 RB1P06400 928 aa25.27■■□□□ 1.64
COL9A2-201ENST00000372736 FGFR1P11362 822 aa25.27■■□□□ 1.64
COL9A2-201ENST00000372736 CUL4AQ13619 759 aa25.27■■□□□ 1.64
COL9A2-201ENST00000372736 FERMT3Q86UX7 667 aa25.27■■□□□ 1.64
COL9A2-201ENST00000372736 ECHDC2Q86YB7 292 aa25.27■■□□□ 1.64
COL9A2-201ENST00000372736 C11orf84Q9BUA3 381 aaPredicted RBP25.27■■□□□ 1.64
COL9A2-201ENST00000372736 INO80BQ9C086 356 aaPredicted RBP25.27■■□□□ 1.64
COL9A2-201ENST00000372736 ATP6V0A4Q9HBG4 840 aa25.27■■□□□ 1.64
COL9A2-201ENST00000372736 RNF19AQ9NV58 838 aa25.27■■□□□ 1.64
COL9A2-201ENST00000372736 GTF3C3Q9Y5Q9 886 aa25.27■■□□□ 1.64
COL9A2-201ENST00000372736 TBKBP1A7MCY6 615 aa25.26■■□□□ 1.63
COL9A2-201ENST00000372736 H3BQV1 296 aa25.26■■□□□ 1.63
COL9A2-201ENST00000372736 DGAT1O75907 488 aa25.26■■□□□ 1.63
COL9A2-201ENST00000372736 RPA1P27694 616 aa25.26■■□□□ 1.63
COL9A2-201ENST00000372736 PTGDRQ13258 359 aa25.26■■□□□ 1.63
COL9A2-201ENST00000372736 POTEGQ6S5H5 508 aa25.26■■□□□ 1.63
COL9A2-201ENST00000372736 ERMNQ8TAM6 284 aa25.26■■□□□ 1.63
COL9A2-201ENST00000372736 CCDC43Q96MW1 224 aaKnown RBP25.26■■□□□ 1.63
COL9A2-201ENST00000372736 PLVAPQ9BX97 442 aa25.26■■□□□ 1.63
COL9A2-201ENST00000372736 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.26■■□□□ 1.63
COL9A2-201ENST00000372736 CHST12Q9NRB3 414 aa25.26■■□□□ 1.63
COL9A2-201ENST00000372736 SPTBN5Q9NRC6 3674 aaKnown RBP25.26■■□□□ 1.63
COL9A2-201ENST00000372736 SRGAP2CP0DJJ0 459 aa25.25■■□□□ 1.63
COL9A2-201ENST00000372736 XRCC6P12956 609 aaKnown RBP eCLIP25.25■■□□□ 1.63
COL9A2-201ENST00000372736 ATF7P17544 494 aaPredicted RBP25.25■■□□□ 1.63
COL9A2-201ENST00000372736 SKIV2LQ15477 1246 aaKnown RBP25.25■■□□□ 1.63
COL9A2-201ENST00000372736 PTPROQ16827 1216 aa25.25■■□□□ 1.63
COL9A2-201ENST00000372736 ZNF598Q86UK7 904 aaKnown RBP25.25■■□□□ 1.63
COL9A2-201ENST00000372736 ATXN2LQ8WWM7 1075 aaKnown RBP25.25■■□□□ 1.63
COL9A2-201ENST00000372736 MINDY3Q9H8M7 445 aa25.25■■□□□ 1.63
COL9A2-201ENST00000372736 DACT1Q9NYF0 836 aa25.25■■□□□ 1.63
COL9A2-201ENST00000372736 MYO7AQ13402 2215 aa25.24■■□□□ 1.63
COL9A2-201ENST00000372736 A0A0U1RQF3 1178 aa25.24■■□□□ 1.63
COL9A2-201ENST00000372736 RILPL1Q5EBL4 403 aa25.24■■□□□ 1.63
COL9A2-201ENST00000372736 CATSPER4Q7RTX7 472 aa25.24■■□□□ 1.63
COL9A2-201ENST00000372736 SRGAP1Q7Z6B7 1085 aa25.24■■□□□ 1.63
COL9A2-201ENST00000372736 RNF149Q8NC42 400 aa25.24■■□□□ 1.63
COL9A2-201ENST00000372736 ASAP3Q8TDY4 903 aa25.24■■□□□ 1.63
COL9A2-201ENST00000372736 TRAIPQ9BWF2 469 aa25.24■■□□□ 1.63
COL9A2-201ENST00000372736 HCSTQ9UBK5 93 aa25.24■■□□□ 1.63
COL9A2-201ENST00000372736 DBR1Q9UK59 544 aaKnown RBP25.24■■□□□ 1.63
COL9A2-201ENST00000372736 PIN4Q9Y237 131 aaKnown RBP25.24■■□□□ 1.63
COL9A2-201ENST00000372736 PLXNA4Q9HCM2 1894 aa25.23■■□□□ 1.63
COL9A2-201ENST00000372736 LAD1O00515 517 aa25.23■■□□□ 1.63
COL9A2-201ENST00000372736 GRM6O15303 877 aa25.23■■□□□ 1.63
COL9A2-201ENST00000372736 ASAP2O43150 1006 aa25.23■■□□□ 1.63
COL9A2-201ENST00000372736 USO1O60763 962 aaKnown RBP25.23■■□□□ 1.63
COL9A2-201ENST00000372736 MXD4Q14582 209 aaPredicted RBP25.23■■□□□ 1.63
COL9A2-201ENST00000372736 TIGD5Q53EQ6 642 aa25.23■■□□□ 1.63
COL9A2-201ENST00000372736 HAUS3Q68CZ6 603 aa25.23■■□□□ 1.63
COL9A2-201ENST00000372736 IGSF22Q8N9C0 903 aa25.23■■□□□ 1.63
COL9A2-201ENST00000372736 P2RX5Q93086 422 aa25.23■■□□□ 1.63
COL9A2-201ENST00000372736 CASD1Q96PB1 797 aa25.23■■□□□ 1.63
COL9A2-201ENST00000372736 NACC1Q96RE7 527 aa25.23■■□□□ 1.63
COL9A2-201ENST00000372736 COL25A1Q9BXS0 654 aaPredicted RBP25.23■■□□□ 1.63
COL9A2-201ENST00000372736 TMEM117Q9H0C3 514 aa25.23■■□□□ 1.63
COL9A2-201ENST00000372736 AGPAT5Q9NUQ2 364 aa25.23■■□□□ 1.63
COL9A2-201ENST00000372736 TTC28Q96AY4 2481 aa25.23■■□□□ 1.63
COL9A2-201ENST00000372736 DLL1O00548 723 aa25.22■■□□□ 1.63
COL9A2-201ENST00000372736 HOXA2O43364 376 aa25.22■■□□□ 1.63
COL9A2-201ENST00000372736 ARL2P36404 184 aa25.22■■□□□ 1.63
COL9A2-201ENST00000372736 PRPHP41219 470 aa25.22■■□□□ 1.63
COL9A2-201ENST00000372736 TFF2Q03403 129 aa25.22■■□□□ 1.63
COL9A2-201ENST00000372736 IL17AQ16552 155 aa25.22■■□□□ 1.63
COL9A2-201ENST00000372736 TJAP1Q5JTD0 557 aa25.22■■□□□ 1.63
COL9A2-201ENST00000372736 CLLU1OSQ5K130 101 aa25.22■■□□□ 1.63
COL9A2-201ENST00000372736 LARP1BQ659C4 914 aaKnown RBP25.22■■□□□ 1.63
COL9A2-201ENST00000372736 LMAN2LQ9H0V9 348 aa25.22■■□□□ 1.63
COL9A2-201ENST00000372736 LRWD1Q9UFC0 647 aa25.22■■□□□ 1.63
COL9A2-201ENST00000372736 MUTP22033 750 aa25.21■■□□□ 1.63
COL9A2-201ENST00000372736 PHKA2P46019 1235 aa25.21■■□□□ 1.63
COL9A2-201ENST00000372736 PTENP60484 403 aa25.21■■□□□ 1.63
COL9A2-201ENST00000372736 CAPSQ13938 189 aa25.21■■□□□ 1.63
COL9A2-201ENST00000372736 PDIA5Q14554 519 aa25.21■■□□□ 1.63
COL9A2-201ENST00000372736 ECM1Q16610 540 aa25.21■■□□□ 1.63
COL9A2-201ENST00000372736 NAALADL2Q58DX5 795 aa25.21■■□□□ 1.63
COL9A2-201ENST00000372736 TWF2Q6IBS0 349 aaKnown RBP25.21■■□□□ 1.63
COL9A2-201ENST00000372736 RNF169Q8NCN4 708 aa25.21■■□□□ 1.63
COL9A2-201ENST00000372736 ASB2Q96Q27 587 aa25.21■■□□□ 1.63
COL9A2-201ENST00000372736 POLR3FQ9H1D9 316 aaPredicted RBP25.21■■□□□ 1.63
COL9A2-201ENST00000372736 PLAGL2Q9UPG8 496 aa25.21■■□□□ 1.63
COL9A2-201ENST00000372736 EOMESO95936 686 aa25.2■■□□□ 1.62
COL9A2-201ENST00000372736 ITGB1P05556 798 aa25.2■■□□□ 1.62
COL9A2-201ENST00000372736 GLRA2P23416 452 aa25.2■■□□□ 1.62
COL9A2-201ENST00000372736 CCT6AP40227 531 aaKnown RBP25.2■■□□□ 1.62
COL9A2-201ENST00000372736 MRPS5P82675 430 aaKnown RBP25.2■■□□□ 1.62
COL9A2-201ENST00000372736 ATP2C1P98194 919 aaPredicted RBP25.2■■□□□ 1.62
COL9A2-201ENST00000372736 IFNLR1Q8IU57 520 aaPredicted RBP25.2■■□□□ 1.62
COL9A2-201ENST00000372736 KLHL23Q8NBE8 558 aa25.2■■□□□ 1.62
COL9A2-201ENST00000372736 CWH43Q9H720 699 aa25.2■■□□□ 1.62
COL9A2-201ENST00000372736 ALG13Q9NP73 1137 aaKnown RBP25.2■■□□□ 1.62
COL9A2-201ENST00000372736 TYW1Q9NV66 732 aaKnown RBP25.2■■□□□ 1.62
COL9A2-201ENST00000372736 COG5Q9UP83 839 aa25.2■■□□□ 1.62
COL9A2-201ENST00000372736 HOXA11P31270 313 aaPredicted RBP25.19■■□□□ 1.62
COL9A2-201ENST00000372736 POU5F1BQ06416 359 aa25.19■■□□□ 1.62
COL9A2-201ENST00000372736 CAMK1Q14012 370 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms