RNA–Protein interactions for RNA: ENST00000372097.9

GTF3C5-202, Transcript of general transcription factor IIIC subunit 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C5, Length 2,406 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-202ENST00000372097 REEP2Q9BRK0 252 aa20.8■□□□□ 0.92
GTF3C5-202ENST00000372097 PSTPIP2Q9H939 334 aa20.8■□□□□ 0.92
GTF3C5-202ENST00000372097 CDK5RAP2Q96SN8 1893 aa20.8■□□□□ 0.92
GTF3C5-202ENST00000372097 AFF2P51816 1311 aa20.8■□□□□ 0.92
GTF3C5-202ENST00000372097 SPATA31A6Q5VVP1 1343 aa20.8■□□□□ 0.92
GTF3C5-202ENST00000372097 GBP2P32456 591 aaPredicted RBP20.8■□□□□ 0.92
GTF3C5-202ENST00000372097 ZNF211Q13398 564 aaPredicted RBP20.8■□□□□ 0.92
GTF3C5-202ENST00000372097 ZNF268Q14587 947 aaPredicted RBP20.8■□□□□ 0.92
GTF3C5-202ENST00000372097 UBAP2Q5T6F2 1119 aaKnown RBP20.8■□□□□ 0.92
GTF3C5-202ENST00000372097 TBC1D1Q86TI0 1168 aaPredicted RBP20.8■□□□□ 0.92
GTF3C5-202ENST00000372097 PNMA8AQ86V59 439 aaPredicted RBP20.8■□□□□ 0.92
GTF3C5-202ENST00000372097 CATSPER3Q86XQ3 398 aa20.8■□□□□ 0.92
GTF3C5-202ENST00000372097 TBC1D16Q8TBP0 767 aa20.8■□□□□ 0.92
GTF3C5-202ENST00000372097 ALG3Q92685 438 aa20.8■□□□□ 0.92
GTF3C5-202ENST00000372097 STAMBPL1Q96FJ0 436 aa20.8■□□□□ 0.92
GTF3C5-202ENST00000372097 NAP1L4Q99733 375 aaKnown RBP20.8■□□□□ 0.92
GTF3C5-202ENST00000372097 SYT11Q9BT88 431 aa20.8■□□□□ 0.92
GTF3C5-202ENST00000372097 TMEM109Q9BVC6 243 aa20.8■□□□□ 0.92
GTF3C5-202ENST00000372097 SEMA4AQ9H3S1 761 aa20.8■□□□□ 0.92
GTF3C5-202ENST00000372097 TYW1Q9NV66 732 aaKnown RBP20.8■□□□□ 0.92
GTF3C5-202ENST00000372097 AGAP1Q9UPQ3 857 aa20.8■□□□□ 0.92
GTF3C5-202ENST00000372097 ASTN1O14525 1302 aa20.8■□□□□ 0.92
GTF3C5-202ENST00000372097 SMIM23A6NLE4 172 aa20.79■□□□□ 0.92
GTF3C5-202ENST00000372097 ABCB4P21439 1286 aa20.79■□□□□ 0.92
GTF3C5-202ENST00000372097 SOX5P35711 763 aa20.79■□□□□ 0.92
GTF3C5-202ENST00000372097 RHBDL3P58872 404 aa20.79■□□□□ 0.92
GTF3C5-202ENST00000372097 ADCY2Q08462 1091 aa20.79■□□□□ 0.92
GTF3C5-202ENST00000372097 ZNF543Q08ER8 600 aa20.79■□□□□ 0.92
GTF3C5-202ENST00000372097 BMT2Q1RMZ1 405 aa20.79■□□□□ 0.92
GTF3C5-202ENST00000372097 FAM133BQ5BKY9 247 aaKnown RBP20.79■□□□□ 0.92
GTF3C5-202ENST00000372097 TNFAIP8L3Q5GJ75 292 aa20.79■□□□□ 0.92
GTF3C5-202ENST00000372097 MAB21L3Q8N8X9 362 aa20.79■□□□□ 0.92
GTF3C5-202ENST00000372097 CTNNBL1Q8WYA6 563 aaPredicted RBP20.79■□□□□ 0.92
GTF3C5-202ENST00000372097 PLIN4Q96Q06 1357 aa20.79■□□□□ 0.92
GTF3C5-202ENST00000372097 CCDC189A1A4V9 331 aa20.79■□□□□ 0.92
GTF3C5-202ENST00000372097 VIMP08670 466 aaKnown RBP20.79■□□□□ 0.92
GTF3C5-202ENST00000372097 VCAM1P19320 739 aa20.79■□□□□ 0.92
GTF3C5-202ENST00000372097 RPL13P26373 211 aaKnown RBP20.79■□□□□ 0.92
GTF3C5-202ENST00000372097 PTGIRP43119 386 aa20.79■□□□□ 0.92
GTF3C5-202ENST00000372097 SLC8A3P57103 927 aa20.79■□□□□ 0.92
GTF3C5-202ENST00000372097 BORCS6Q96GS4 357 aa20.79■□□□□ 0.92
GTF3C5-202ENST00000372097 ABCF3Q9NUQ8 709 aa20.79■□□□□ 0.92
GTF3C5-202ENST00000372097 PAX7P23759 505 aa20.78■□□□□ 0.92
GTF3C5-202ENST00000372097 EIF6P56537 245 aaKnown RBP20.78■□□□□ 0.92
GTF3C5-202ENST00000372097 PABPC4Q13310 644 aaKnown RBP eCLIP20.78■□□□□ 0.924e-6■■■□□ 16
GTF3C5-202ENST00000372097 TTBK2Q6IQ55 1244 aa20.78■□□□□ 0.92
GTF3C5-202ENST00000372097 CROCCP2Q86T23 111 aa20.78■□□□□ 0.92
GTF3C5-202ENST00000372097 SYT2Q8N9I0 419 aaPredicted RBP20.78■□□□□ 0.92
GTF3C5-202ENST00000372097 ARHGEF26Q96DR7 871 aa20.78■□□□□ 0.92
GTF3C5-202ENST00000372097 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.78■□□□□ 0.92
GTF3C5-202ENST00000372097 BBOX1O75936 387 aa20.78■□□□□ 0.92
GTF3C5-202ENST00000372097 ECM2O94769 699 aaPredicted RBP20.78■□□□□ 0.92
GTF3C5-202ENST00000372097 CLUL1Q15846 466 aa20.78■□□□□ 0.92
GTF3C5-202ENST00000372097 KIRREL3Q8IZU9 778 aa20.78■□□□□ 0.92
GTF3C5-202ENST00000372097 NSMCE1Q8WV22 266 aa20.78■□□□□ 0.92
GTF3C5-202ENST00000372097 C18orf8Q96DM3 657 aa20.78■□□□□ 0.92
GTF3C5-202ENST00000372097 RSRC1Q96IZ7 334 aaKnown RBP20.78■□□□□ 0.92
GTF3C5-202ENST00000372097 STK33Q9BYT3 514 aa20.78■□□□□ 0.92
GTF3C5-202ENST00000372097 RASAL2Q9UJF2 1139 aa20.78■□□□□ 0.92
GTF3C5-202ENST00000372097 RIMBP2O15034 1052 aa20.77■□□□□ 0.92
GTF3C5-202ENST00000372097 SNX3O60493 162 aa20.77■□□□□ 0.92
GTF3C5-202ENST00000372097 SPIRE1Q08AE8 756 aa20.77■□□□□ 0.92
GTF3C5-202ENST00000372097 MYO1EQ12965 1108 aa20.77■□□□□ 0.92
GTF3C5-202ENST00000372097 BTNL9Q6UXG8 535 aa20.77■□□□□ 0.92
GTF3C5-202ENST00000372097 CLEC10AQ8IUN9 316 aa20.77■□□□□ 0.92
GTF3C5-202ENST00000372097 CCHCR1Q8TD31 782 aa20.77■□□□□ 0.92
GTF3C5-202ENST00000372097 EPS8L3Q8TE67 593 aaKnown RBP20.77■□□□□ 0.92
GTF3C5-202ENST00000372097 COG5Q9UP83 839 aa20.77■□□□□ 0.92
GTF3C5-202ENST00000372097 L3MBTL1Q9Y468 752 aa20.77■□□□□ 0.92
GTF3C5-202ENST00000372097 PCDHB13Q9Y5F0 798 aa20.77■□□□□ 0.92
GTF3C5-202ENST00000372097 PCDHA3Q9Y5H8 950 aa20.77■□□□□ 0.92
GTF3C5-202ENST00000372097 CYP3A7-CYP3A51PA0A087WV96 503 aa20.77■□□□□ 0.92
GTF3C5-202ENST00000372097 IGKV6D-41A0A0C4DH26 115 aa20.77■□□□□ 0.92
GTF3C5-202ENST00000372097 MEIS1O00470 390 aa20.77■□□□□ 0.92
GTF3C5-202ENST00000372097 CLIC2O15247 247 aa20.77■□□□□ 0.92
GTF3C5-202ENST00000372097 OAS1P00973 400 aaKnown RBP20.77■□□□□ 0.92
GTF3C5-202ENST00000372097 ALADP13716 330 aa20.77■□□□□ 0.92
GTF3C5-202ENST00000372097 PLCG2P16885 1265 aa20.77■□□□□ 0.92
GTF3C5-202ENST00000372097 CYP3A7P24462 503 aa20.77■□□□□ 0.92
GTF3C5-202ENST00000372097 RPL21P46778 160 aaKnown RBP20.77■□□□□ 0.92
GTF3C5-202ENST00000372097 IFNAR2P48551 515 aa20.77■□□□□ 0.92
GTF3C5-202ENST00000372097 GTF2IP78347 998 aa20.77■□□□□ 0.92
GTF3C5-202ENST00000372097 CNGA2Q16280 664 aa20.77■□□□□ 0.92
GTF3C5-202ENST00000372097 NSRP1Q9H0G5 558 aaKnown RBP20.77■□□□□ 0.92
GTF3C5-202ENST00000372097 UBR3Q6ZT12 1888 aa20.77■□□□□ 0.91
GTF3C5-202ENST00000372097 USP17L15C9J2P7 530 aa20.76■□□□□ 0.91
GTF3C5-202ENST00000372097 USP17L13C9JLJ4 530 aa20.76■□□□□ 0.91
GTF3C5-202ENST00000372097 USP17L11C9JVI0 530 aa20.76■□□□□ 0.91
GTF3C5-202ENST00000372097 USP17L18D6R9N7 530 aa20.76■□□□□ 0.91
GTF3C5-202ENST00000372097 USP17L22D6RA61 530 aa20.76■□□□□ 0.91
GTF3C5-202ENST00000372097 USP17L17D6RBQ6 530 aa20.76■□□□□ 0.91
GTF3C5-202ENST00000372097 USP17L19D6RCP7 530 aa20.76■□□□□ 0.91
GTF3C5-202ENST00000372097 USP17L20D6RJB6 530 aa20.76■□□□□ 0.91
GTF3C5-202ENST00000372097 ZBTB5O15062 677 aa20.76■□□□□ 0.91
GTF3C5-202ENST00000372097 ANP32DO95626 131 aa20.76■□□□□ 0.91
GTF3C5-202ENST00000372097 SPATA31C1P0DKV0 1188 aa20.76■□□□□ 0.91
GTF3C5-202ENST00000372097 AKR1B1P15121 316 aa20.76■□□□□ 0.91
GTF3C5-202ENST00000372097 KCNA1Q09470 495 aa20.76■□□□□ 0.91
GTF3C5-202ENST00000372097 USP17L24Q0WX57 530 aa20.76■□□□□ 0.91
GTF3C5-202ENST00000372097 PICALMQ13492 652 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms