RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 H3BRB1 525 aa20.28■□□□□ 0.84
VEGFA-206ENST00000372077 MAFO75444 373 aaPredicted RBP20.28■□□□□ 0.84
VEGFA-206ENST00000372077 SEC31AO94979 1220 aaKnown RBP20.28■□□□□ 0.84
VEGFA-206ENST00000372077 CPT1AP50416 773 aa20.28■□□□□ 0.84
VEGFA-206ENST00000372077 CASP5P51878 434 aa20.28■□□□□ 0.84
VEGFA-206ENST00000372077 POLGP54098 1239 aaPredicted RBP20.28■□□□□ 0.84
VEGFA-206ENST00000372077 RTP1P59025 263 aa20.28■□□□□ 0.84
VEGFA-206ENST00000372077 EMC2Q15006 297 aa20.28■□□□□ 0.84
VEGFA-206ENST00000372077 ODR4Q5SWX8 454 aa20.28■□□□□ 0.84
VEGFA-206ENST00000372077 FAM102BQ5T8I3 360 aa20.28■□□□□ 0.84
VEGFA-206ENST00000372077 GPIHBP1Q8IV16 184 aa20.28■□□□□ 0.84
VEGFA-206ENST00000372077 TUT1Q9H6E5 874 aaKnown RBP20.28■□□□□ 0.84
VEGFA-206ENST00000372077 C17orf75Q9HAS0 396 aa20.28■□□□□ 0.84
VEGFA-206ENST00000372077 MYH11P35749 1972 aa20.28■□□□□ 0.84
VEGFA-206ENST00000372077 SLU7O95391 586 aaKnown RBP20.27■□□□□ 0.84
VEGFA-206ENST00000372077 PRKAR2AP13861 404 aaKnown RBP20.27■□□□□ 0.84
VEGFA-206ENST00000372077 PMS1P54277 932 aaKnown RBP20.27■□□□□ 0.84
VEGFA-206ENST00000372077 GJA9P57773 515 aa20.27■□□□□ 0.84
VEGFA-206ENST00000372077 BMT2Q1RMZ1 405 aa20.27■□□□□ 0.84
VEGFA-206ENST00000372077 ZNF720Q7Z2F6 126 aa20.27■□□□□ 0.84
VEGFA-206ENST00000372077 ZNF507Q8TCN5 953 aa20.27■□□□□ 0.84
VEGFA-206ENST00000372077 UPF3AQ9H1J1 476 aaKnown RBP20.27■□□□□ 0.84
VEGFA-206ENST00000372077 SEMA6BQ9H3T3 888 aa20.27■□□□□ 0.84
VEGFA-206ENST00000372077 TRPC6Q9Y210 931 aa20.27■□□□□ 0.84
VEGFA-206ENST00000372077 TEX33O43247 280 aa20.27■□□□□ 0.84
VEGFA-206ENST00000372077 KIF20AO95235 890 aa20.27■□□□□ 0.84
VEGFA-206ENST00000372077 IRX5P78411 483 aaPredicted RBP20.27■□□□□ 0.84
VEGFA-206ENST00000372077 ZNF484Q5JVG2 852 aa20.27■□□□□ 0.84
VEGFA-206ENST00000372077 TTI2Q6NXR4 508 aa20.27■□□□□ 0.84
VEGFA-206ENST00000372077 FOXR2Q6PJQ5 311 aa20.27■□□□□ 0.84
VEGFA-206ENST00000372077 FAM178BQ8IXR5 827 aa20.27■□□□□ 0.84
VEGFA-206ENST00000372077 STRA6Q9BX79 667 aa20.27■□□□□ 0.84
VEGFA-206ENST00000372077 IGKV6-21A0A0C4DH24 114 aa20.26■□□□□ 0.83
VEGFA-206ENST00000372077 EIF3DO15371 548 aaKnown RBP eCLIP20.26■□□□□ 0.83
VEGFA-206ENST00000372077 MYBP10242 640 aa20.26■□□□□ 0.83
VEGFA-206ENST00000372077 CCND3P30281 292 aaPredicted RBP20.26■□□□□ 0.83
VEGFA-206ENST00000372077 NMT1P30419 496 aaKnown RBP20.26■□□□□ 0.83
VEGFA-206ENST00000372077 ARHGAP29Q52LW3 1261 aa20.26■□□□□ 0.83
VEGFA-206ENST00000372077 EXOC8Q8IYI6 725 aa20.26■□□□□ 0.83
VEGFA-206ENST00000372077 SLC7A3Q8WY07 619 aa20.26■□□□□ 0.83
VEGFA-206ENST00000372077 CARD6Q9BX69 1037 aa20.26■□□□□ 0.83
VEGFA-206ENST00000372077 BRDTQ58F21 947 aaPredicted RBP20.26■□□□□ 0.83
VEGFA-206ENST00000372077 LZTFL1Q9NQ48 299 aa20.26■□□□□ 0.83
VEGFA-206ENST00000372077 BICDL2A1A5D9 508 aa20.26■□□□□ 0.83
VEGFA-206ENST00000372077 TRIM49BA6NDI0 452 aa20.26■□□□□ 0.83
VEGFA-206ENST00000372077 F2P00734 622 aa20.26■□□□□ 0.83
VEGFA-206ENST00000372077 COL1A2P08123 1366 aa20.26■□□□□ 0.83
VEGFA-206ENST00000372077 CNGA1P29973 690 aa20.26■□□□□ 0.83
VEGFA-206ENST00000372077 SOX10P56693 466 aa20.26■□□□□ 0.83
VEGFA-206ENST00000372077 ANKRD40Q6AI12 368 aa20.26■□□□□ 0.83
VEGFA-206ENST00000372077 SLAIN1Q8ND83 568 aa20.26■□□□□ 0.83
VEGFA-206ENST00000372077 KAT2BQ92831 832 aa20.26■□□□□ 0.83
VEGFA-206ENST00000372077 WDR24Q96S15 920 aa20.26■□□□□ 0.83
VEGFA-206ENST00000372077 NTPCRQ9BSD7 190 aaKnown RBP20.26■□□□□ 0.83
VEGFA-206ENST00000372077 ST6GALNAC4Q9H4F1 302 aa20.26■□□□□ 0.83
VEGFA-206ENST00000372077 ZNF446Q9NWS9 450 aa20.26■□□□□ 0.83
VEGFA-206ENST00000372077 PPP1R37O75864 691 aa20.25■□□□□ 0.83
VEGFA-206ENST00000372077 GCNT3O95395 438 aa20.25■□□□□ 0.83
VEGFA-206ENST00000372077 INSRRP14616 1297 aa20.25■□□□□ 0.83
VEGFA-206ENST00000372077 HOXD13P35453 343 aa20.25■□□□□ 0.83
VEGFA-206ENST00000372077 ARL2P36404 184 aa20.25■□□□□ 0.83
VEGFA-206ENST00000372077 TBC1D8BQ0IIM8 1120 aa20.25■□□□□ 0.83
VEGFA-206ENST00000372077 FSCN1Q16658 493 aaKnown RBP20.25■□□□□ 0.83
VEGFA-206ENST00000372077 SPIRE2Q8WWL2 714 aa20.25■□□□□ 0.83
VEGFA-206ENST00000372077 DUSP9Q99956 384 aaKnown RBP20.25■□□□□ 0.83
VEGFA-206ENST00000372077 KCTD10Q9H3F6 313 aa20.25■□□□□ 0.83
VEGFA-206ENST00000372077 GAS2O43903 313 aaKnown RBP20.25■□□□□ 0.83
VEGFA-206ENST00000372077 ZNF18P17022 549 aa20.25■□□□□ 0.83
VEGFA-206ENST00000372077 NCKAP1LP55160 1127 aa20.25■□□□□ 0.83
VEGFA-206ENST00000372077 POLR3FQ9H1D9 316 aaPredicted RBP20.25■□□□□ 0.83
VEGFA-206ENST00000372077 UBE4BO95155 1302 aa20.24■□□□□ 0.83
VEGFA-206ENST00000372077 RARBP10826 455 aa20.24■□□□□ 0.83
VEGFA-206ENST00000372077 PEX3P56589 373 aa20.24■□□□□ 0.83
VEGFA-206ENST00000372077 BEX3Q00994 111 aa20.24■□□□□ 0.83
VEGFA-206ENST00000372077 ZCWPW2Q504Y3 356 aa20.24■□□□□ 0.83
VEGFA-206ENST00000372077 SLC17A8Q8NDX2 589 aa20.24■□□□□ 0.83
VEGFA-206ENST00000372077 BSNDQ8WZ55 320 aa20.24■□□□□ 0.83
VEGFA-206ENST00000372077 TRIM17Q9Y577 477 aa20.24■□□□□ 0.83
VEGFA-206ENST00000372077 HAS3O00219 553 aa20.24■□□□□ 0.83
VEGFA-206ENST00000372077 PRPF6O94906 941 aaKnown RBP20.24■□□□□ 0.83
VEGFA-206ENST00000372077 GNG11P61952 73 aa20.24■□□□□ 0.83
VEGFA-206ENST00000372077 ALCAMQ13740 583 aa20.24■□□□□ 0.83
VEGFA-206ENST00000372077 CCDC150Q8NCX0 1101 aa20.24■□□□□ 0.83
VEGFA-206ENST00000372077 JPH2Q9BR39 696 aaPredicted RBP20.24■□□□□ 0.83
VEGFA-206ENST00000372077 CGNQ9P2M7 1197 aaKnown RBP20.24■□□□□ 0.83
VEGFA-206ENST00000372077 PCDHB13Q9Y5F0 798 aa20.24■□□□□ 0.83
VEGFA-206ENST00000372077 NPTX2P47972 431 aa20.23■□□□□ 0.83
VEGFA-206ENST00000372077 LRRC63Q05C16 580 aa20.23■□□□□ 0.83
VEGFA-206ENST00000372077 CDKAL1Q5VV42 579 aa20.23■□□□□ 0.83
VEGFA-206ENST00000372077 STXBP4Q6ZWJ1 553 aa20.23■□□□□ 0.83
VEGFA-206ENST00000372077 TMEM143Q96AN5 459 aa20.23■□□□□ 0.83
VEGFA-206ENST00000372077 KCNG1Q9UIX4 513 aa20.23■□□□□ 0.83
VEGFA-206ENST00000372077 MYADML2A6NDP7 307 aa20.23■□□□□ 0.83
VEGFA-206ENST00000372077 KPNA6O60684 536 aa20.23■□□□□ 0.83
VEGFA-206ENST00000372077 KNOP1Q1ED39 458 aaKnown RBP20.23■□□□□ 0.83
VEGFA-206ENST00000372077 ZC2HC1CQ53FD0 456 aaPredicted RBP20.23■□□□□ 0.83
VEGFA-206ENST00000372077 NELFCDQ8IXH7 590 aa20.23■□□□□ 0.83
VEGFA-206ENST00000372077 TRAPPC12Q8WVT3 735 aa20.23■□□□□ 0.83
VEGFA-206ENST00000372077 PTCH2Q9Y6C5 1203 aa20.23■□□□□ 0.83
VEGFA-206ENST00000372077 ADAMTS4O75173 837 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms