RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 PCSK1NQ9UHG2 260 aa23.66■■□□□ 1.38
TM9SF3-201ENST00000371142 M0QYV0 167 aa23.65■■□□□ 1.38
TM9SF3-201ENST00000371142 TADA3O75528 432 aa23.65■■□□□ 1.38
TM9SF3-201ENST00000371142 PDCLQ13371 301 aa23.65■■□□□ 1.38
TM9SF3-201ENST00000371142 SNX2O60749 519 aa23.65■■□□□ 1.38
TM9SF3-201ENST00000371142 SKIP12755 728 aa23.65■■□□□ 1.38
TM9SF3-201ENST00000371142 PHKA2P46019 1235 aa23.65■■□□□ 1.38
TM9SF3-201ENST00000371142 ZBED2Q9BTP6 218 aa23.65■■□□□ 1.38
TM9SF3-201ENST00000371142 ZNF302Q9NR11 478 aa23.65■■□□□ 1.38
TM9SF3-201ENST00000371142 MYO5CQ9NQX4 1742 aa23.65■■□□□ 1.38
TM9SF3-201ENST00000371142 HUS1O60921 280 aa23.65■■□□□ 1.38
TM9SF3-201ENST00000371142 SMAD1Q15797 465 aaKnown RBP23.65■■□□□ 1.38
TM9SF3-201ENST00000371142 TEX2Q8IWB9 1127 aa23.65■■□□□ 1.38
TM9SF3-201ENST00000371142 NDUFAF2Q8N183 169 aa23.65■■□□□ 1.38
TM9SF3-201ENST00000371142 ZBTB18Q99592 522 aa23.65■■□□□ 1.38
TM9SF3-201ENST00000371142 TRIM15Q9C019 465 aa23.65■■□□□ 1.38
TM9SF3-201ENST00000371142 POTEFA5A3E0 1075 aa23.65■■□□□ 1.38
TM9SF3-201ENST00000371142 POTEIP0CG38 1075 aa23.65■■□□□ 1.38
TM9SF3-201ENST00000371142 ARHGDIAP52565 204 aa23.65■■□□□ 1.38
TM9SF3-201ENST00000371142 NOP14P78316 857 aaKnown RBP23.65■■□□□ 1.38
TM9SF3-201ENST00000371142 GLE1Q53GS7 698 aaKnown RBP23.65■■□□□ 1.38
TM9SF3-201ENST00000371142 RNF219Q5W0B1 726 aaPredicted RBP23.65■■□□□ 1.38
TM9SF3-201ENST00000371142 POTEGQ6S5H5 508 aa23.65■■□□□ 1.38
TM9SF3-201ENST00000371142 POTEEQ6S8J3 1075 aa23.65■■□□□ 1.38
TM9SF3-201ENST00000371142 POLE2P56282 527 aa23.65■■□□□ 1.38
TM9SF3-201ENST00000371142 SNX19Q92543 992 aa23.64■■□□□ 1.38
TM9SF3-201ENST00000371142 FAM167AQ96KS9 214 aa23.64■■□□□ 1.38
TM9SF3-201ENST00000371142 MMTAG2Q9BU76 263 aaKnown RBP23.64■■□□□ 1.38
TM9SF3-201ENST00000371142 LY9Q9HBG7 655 aa23.64■■□□□ 1.38
TM9SF3-201ENST00000371142 SUN2Q9UH99 717 aa23.64■■□□□ 1.38
TM9SF3-201ENST00000371142 F8W8V4 182 aa23.64■■□□□ 1.38
TM9SF3-201ENST00000371142 SSTR3P32745 418 aaPredicted RBP23.64■■□□□ 1.38
TM9SF3-201ENST00000371142 ZNF746Q6NUN9 644 aaPredicted RBP23.64■■□□□ 1.38
TM9SF3-201ENST00000371142 ZNF564Q8TBZ8 553 aaPredicted RBP23.64■■□□□ 1.38
TM9SF3-201ENST00000371142 TRIM55Q9BYV6 548 aa23.64■■□□□ 1.38
TM9SF3-201ENST00000371142 TOPORSQ9NS56 1045 aaPredicted RBP23.64■■□□□ 1.38
TM9SF3-201ENST00000371142 SPATA31E1Q6ZUB1 1445 aa23.64■■□□□ 1.38
TM9SF3-201ENST00000371142 KDM5CP41229 1560 aa23.64■■□□□ 1.38
TM9SF3-201ENST00000371142 H3BRJ5 948 aa23.64■■□□□ 1.37
TM9SF3-201ENST00000371142 TRIM59Q8IWR1 403 aa23.64■■□□□ 1.37
TM9SF3-201ENST00000371142 MLXIPLQ9NP71 852 aa23.64■■□□□ 1.37
TM9SF3-201ENST00000371142 PNMA6AP0CW24 399 aaPredicted RBP23.64■■□□□ 1.37
TM9SF3-201ENST00000371142 EEF1DP29692 281 aaKnown RBP23.64■■□□□ 1.37
TM9SF3-201ENST00000371142 HADHAP40939 763 aa23.64■■□□□ 1.37
TM9SF3-201ENST00000371142 SWSAP1Q6NVH7 229 aa23.64■■□□□ 1.37
TM9SF3-201ENST00000371142 EPM2AIP1Q7L775 607 aaPredicted RBP23.64■■□□□ 1.37
TM9SF3-201ENST00000371142 PROM2Q8N271 834 aa23.64■■□□□ 1.37
TM9SF3-201ENST00000371142 SMYD3Q9H7B4 428 aa23.64■■□□□ 1.37
TM9SF3-201ENST00000371142 STK36Q9NRP7 1315 aa23.64■■□□□ 1.37
TM9SF3-201ENST00000371142 ESRRBO95718 433 aa23.63■■□□□ 1.37
TM9SF3-201ENST00000371142 VAMP7P51809 220 aa23.63■■□□□ 1.37
TM9SF3-201ENST00000371142 TXNRD1Q16881 649 aa23.63■■□□□ 1.37
TM9SF3-201ENST00000371142 GIMAP8Q8ND71 665 aaPredicted RBP23.63■■□□□ 1.37
TM9SF3-201ENST00000371142 KIAA1586Q9HCI6 787 aa23.63■■□□□ 1.37
TM9SF3-201ENST00000371142 HOXC10Q9NYD6 342 aa23.63■■□□□ 1.37
TM9SF3-201ENST00000371142 MIF4GDA9UHW6 222 aaKnown RBP23.63■■□□□ 1.37
TM9SF3-201ENST00000371142 DCTN3O75935 186 aa23.63■■□□□ 1.37
TM9SF3-201ENST00000371142 WDR75Q8IWA0 830 aaKnown RBP23.63■■□□□ 1.37
TM9SF3-201ENST00000371142 ABTB1Q969K4 478 aaPredicted RBP23.63■■□□□ 1.37
TM9SF3-201ENST00000371142 TTC37Q6PGP7 1564 aa23.63■■□□□ 1.37
TM9SF3-201ENST00000371142 CALB1P05937 261 aa23.63■■□□□ 1.37
TM9SF3-201ENST00000371142 ZNF579Q8NAF0 562 aaKnown RBP23.63■■□□□ 1.37
TM9SF3-201ENST00000371142 AP1ARQ63HQ0 302 aa23.63■■□□□ 1.37
TM9SF3-201ENST00000371142 RCSD1Q6JBY9 416 aa23.63■■□□□ 1.37
TM9SF3-201ENST00000371142 CDK12Q9NYV4 1490 aaPredicted RBP23.63■■□□□ 1.37
TM9SF3-201ENST00000371142 IGKV5-2P06315 115 aa23.63■■□□□ 1.37
TM9SF3-201ENST00000371142 SAAL1Q96ER3 474 aa23.63■■□□□ 1.37
TM9SF3-201ENST00000371142 INTS2Q9H0H0 1204 aaKnown RBP23.63■■□□□ 1.37
TM9SF3-201ENST00000371142 TBC1D22BQ9NU19 505 aa23.63■■□□□ 1.37
TM9SF3-201ENST00000371142 GABBR1Q9UBS5 961 aa23.63■■□□□ 1.37
TM9SF3-201ENST00000371142 CDC27P30260 824 aa23.62■■□□□ 1.37
TM9SF3-201ENST00000371142 KNOP1Q1ED39 458 aaKnown RBP23.62■■□□□ 1.37
TM9SF3-201ENST00000371142 CLEC4GQ6UXB4 293 aa23.62■■□□□ 1.37
TM9SF3-201ENST00000371142 SARS2Q9NP81 518 aaKnown RBP23.62■■□□□ 1.37
TM9SF3-201ENST00000371142 UTYO14607 1347 aa23.62■■□□□ 1.37
TM9SF3-201ENST00000371142 PP2D1A8MPX8 630 aa23.62■■□□□ 1.37
TM9SF3-201ENST00000371142 TFDP2Q14188 446 aa23.62■■□□□ 1.37
TM9SF3-201ENST00000371142 NFRKBQ6P4R8 1299 aa23.62■■□□□ 1.37
TM9SF3-201ENST00000371142 CD209Q9NNX6 404 aa23.62■■□□□ 1.37
TM9SF3-201ENST00000371142 TSR3Q9UJK0 312 aaKnown RBP23.62■■□□□ 1.37
TM9SF3-201ENST00000371142 ZNF521Q96K83 1311 aa23.62■■□□□ 1.37
TM9SF3-201ENST00000371142 ARHGEF5Q12774 1597 aa23.62■■□□□ 1.37
TM9SF3-201ENST00000371142 RPS6KA4O75676 772 aa23.62■■□□□ 1.37
TM9SF3-201ENST00000371142 GNAT1P11488 350 aa23.62■■□□□ 1.37
TM9SF3-201ENST00000371142 KIAA1755Q5JYT7 1200 aa23.62■■□□□ 1.37
TM9SF3-201ENST00000371142 BEST2Q8NFU1 509 aa23.62■■□□□ 1.37
TM9SF3-201ENST00000371142 APOBEC2Q9Y235 224 aaKnown RBP23.62■■□□□ 1.37
TM9SF3-201ENST00000371142 TSPY1Q01534 308 aa23.62■■□□□ 1.37
TM9SF3-201ENST00000371142 FGFR1OP2Q9NVK5 253 aa23.62■■□□□ 1.37
TM9SF3-201ENST00000371142 CTIFO43310 598 aaKnown RBP23.62■■□□□ 1.37
TM9SF3-201ENST00000371142 CAPRIN1Q14444 709 aaKnown RBP23.62■■□□□ 1.37
TM9SF3-201ENST00000371142 TTC13Q8NBP0 860 aa23.62■■□□□ 1.37
TM9SF3-201ENST00000371142 CEP19Q96LK0 163 aa23.61■■□□□ 1.37
TM9SF3-201ENST00000371142 RNF146Q9NTX7 359 aa23.61■■□□□ 1.37
TM9SF3-201ENST00000371142 GYG2O15488 501 aa23.61■■□□□ 1.37
TM9SF3-201ENST00000371142 SPAG7O75391 227 aa23.61■■□□□ 1.37
TM9SF3-201ENST00000371142 KRT38O76015 456 aa23.61■■□□□ 1.37
TM9SF3-201ENST00000371142 GNA15P30679 374 aa23.61■■□□□ 1.37
TM9SF3-201ENST00000371142 BEND6Q5SZJ8 279 aaPredicted RBP23.61■■□□□ 1.37
TM9SF3-201ENST00000371142 AFG1LQ8WV93 481 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms