RNA–Protein interactions for RNA: ENST00000370228.1

TWNK-202, Transcript of twinkle mtDNA helicase, humanhuman

TSL 1 (best) BASIC

Gene TWNK, Length 3,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWNK-202ENST00000370228 TMEM110-MUSTN1A8MSY1 372 aa11.72□□□□□ -0.53
TWNK-202ENST00000370228 STK10O94804 968 aaKnown RBP11.72□□□□□ -0.53
TWNK-202ENST00000370228 TSPY3P0CV98 308 aa11.72□□□□□ -0.53
TWNK-202ENST00000370228 TSPY8P0CW00 308 aa11.72□□□□□ -0.53
TWNK-202ENST00000370228 GNAT2P19087 354 aa11.72□□□□□ -0.53
TWNK-202ENST00000370228 BDNFP23560 247 aa11.72□□□□□ -0.53
TWNK-202ENST00000370228 MAP7Q14244 749 aa11.72□□□□□ -0.53
TWNK-202ENST00000370228 GJC2Q5T442 439 aaPredicted RBP11.72□□□□□ -0.53
TWNK-202ENST00000370228 PPFIBP1Q86W92 1011 aa11.72□□□□□ -0.53
TWNK-202ENST00000370228 LRRC49Q8IUZ0 686 aa11.72□□□□□ -0.53
TWNK-202ENST00000370228 PRCCQ92733 491 aaPredicted RBP11.72□□□□□ -0.53
TWNK-202ENST00000370228 CDCA5Q96FF9 252 aa11.72□□□□□ -0.53
TWNK-202ENST00000370228 AIFM3Q96NN9 605 aa11.72□□□□□ -0.53
TWNK-202ENST00000370228 HSD3B7Q9H2F3 369 aa11.72□□□□□ -0.53
TWNK-202ENST00000370228 ZNF148Q9UQR1 794 aa11.72□□□□□ -0.53
TWNK-202ENST00000370228 SSX2IPQ9Y2D8 614 aa11.72□□□□□ -0.53
TWNK-202ENST00000370228 CARD8Q9Y2G2 431 aa11.72□□□□□ -0.53
TWNK-202ENST00000370228 SPATA31D3P0C874 917 aa11.72□□□□□ -0.53
TWNK-202ENST00000370228 FKBP1AP62942 108 aaKnown RBP11.72□□□□□ -0.53
TWNK-202ENST00000370228 MTF1Q14872 753 aa11.72□□□□□ -0.53
TWNK-202ENST00000370228 SPECC1LQ69YQ0 1117 aa11.72□□□□□ -0.53
TWNK-202ENST00000370228 KRT40Q6A162 431 aa11.72□□□□□ -0.53
TWNK-202ENST00000370228 SPATA31D4Q6ZUB0 917 aa11.72□□□□□ -0.53
TWNK-202ENST00000370228 RSPH3Q86UC2 560 aa11.72□□□□□ -0.53
TWNK-202ENST00000370228 SCUBE1Q8IWY4 988 aa11.72□□□□□ -0.53
TWNK-202ENST00000370228 ZNF444Q8N0Y2 327 aaPredicted RBP11.72□□□□□ -0.53
TWNK-202ENST00000370228 ZBED3Q96IU2 234 aaPredicted RBP11.72□□□□□ -0.53
TWNK-202ENST00000370228 EIF2AQ9BY44 585 aaKnown RBP11.72□□□□□ -0.53
TWNK-202ENST00000370228 PI4KBQ9UBF8 816 aa11.72□□□□□ -0.53
TWNK-202ENST00000370228 NFE2L3Q9Y4A8 694 aa11.72□□□□□ -0.53
TWNK-202ENST00000370228 HEY1Q9Y5J3 304 aa11.72□□□□□ -0.53
TWNK-202ENST00000370228 ITIH6Q6UXX5 1313 aa11.72□□□□□ -0.53
TWNK-202ENST00000370228 hCG_1642624A0A1W2PR95 340 aa11.71□□□□□ -0.53
TWNK-202ENST00000370228 ACTN4O43707 911 aaKnown RBP11.71□□□□□ -0.53
TWNK-202ENST00000370228 ECE1P42892 770 aa11.71□□□□□ -0.53
TWNK-202ENST00000370228 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.71□□□□□ -0.53
TWNK-202ENST00000370228 NEPROQ6NW34 567 aa11.71□□□□□ -0.53
TWNK-202ENST00000370228 RUFY4Q6ZNE9 571 aa11.71□□□□□ -0.53
TWNK-202ENST00000370228 ZNF713Q8N859 430 aaPredicted RBP11.71□□□□□ -0.53
TWNK-202ENST00000370228 CPLX3Q8WVH0 158 aa11.71□□□□□ -0.53
TWNK-202ENST00000370228 FAM151AQ8WW52 585 aa11.71□□□□□ -0.53
TWNK-202ENST00000370228 PHKBQ93100 1093 aa11.71□□□□□ -0.53
TWNK-202ENST00000370228 HIC2Q96JB3 615 aa11.71□□□□□ -0.53
TWNK-202ENST00000370228 CEP295NLQ96MC4 621 aa11.71□□□□□ -0.53
TWNK-202ENST00000370228 ADGRG1Q9Y653 693 aa11.71□□□□□ -0.53
TWNK-202ENST00000370228 MYH7P12883 1935 aa11.71□□□□□ -0.53
TWNK-202ENST00000370228 WDR46O15213 610 aaKnown RBP11.71□□□□□ -0.53
TWNK-202ENST00000370228 PEX10O60683 326 aa11.71□□□□□ -0.53
TWNK-202ENST00000370228 HSF2BPO75031 334 aa11.71□□□□□ -0.53
TWNK-202ENST00000370228 TACC1O75410 805 aa11.71□□□□□ -0.53
TWNK-202ENST00000370228 TNNI2P48788 182 aa11.71□□□□□ -0.53
TWNK-202ENST00000370228 LRP8Q14114 963 aa11.71□□□□□ -0.53
TWNK-202ENST00000370228 CERKLQ49MI3 558 aaPredicted RBP11.71□□□□□ -0.53
TWNK-202ENST00000370228 GLE1Q53GS7 698 aaKnown RBP11.71□□□□□ -0.53
TWNK-202ENST00000370228 GRAMD4Q6IC98 578 aa11.71□□□□□ -0.53
TWNK-202ENST00000370228 USP50Q70EL3 339 aaPredicted RBP11.71□□□□□ -0.53
TWNK-202ENST00000370228 LONP2Q86WA8 852 aa11.71□□□□□ -0.53
TWNK-202ENST00000370228 ABTB1Q969K4 478 aaPredicted RBP11.71□□□□□ -0.53
TWNK-202ENST00000370228 HAPLN3Q96S86 360 aa11.71□□□□□ -0.53
TWNK-202ENST00000370228 IDI2Q9BXS1 227 aa11.71□□□□□ -0.53
TWNK-202ENST00000370228 ABCF3Q9NUQ8 709 aa11.71□□□□□ -0.53
TWNK-202ENST00000370228 ARHGEF38Q9NXL2 777 aa11.71□□□□□ -0.53
TWNK-202ENST00000370228 TUBE1Q9UJT0 475 aa11.71□□□□□ -0.53
TWNK-202ENST00000370228 CCT8L1PA6NM43 557 aa11.71□□□□□ -0.54
TWNK-202ENST00000370228 TRAPPC3O43617 180 aa11.71□□□□□ -0.54
TWNK-202ENST00000370228 PPP6R2O75170 966 aa11.71□□□□□ -0.54
TWNK-202ENST00000370228 GOLGA8HP0CJ92 632 aa11.71□□□□□ -0.54
TWNK-202ENST00000370228 SHMT1P34896 483 aa11.71□□□□□ -0.54
TWNK-202ENST00000370228 ALDH5A1P51649 535 aaPredicted RBP11.71□□□□□ -0.54
TWNK-202ENST00000370228 TNFAIP1Q13829 316 aa11.71□□□□□ -0.54
TWNK-202ENST00000370228 CNPY1Q3B7I2 92 aa11.71□□□□□ -0.54
TWNK-202ENST00000370228 NEK10Q6ZWH5 1172 aa11.71□□□□□ -0.54
TWNK-202ENST00000370228 GDAP1Q8TB36 358 aa11.71□□□□□ -0.54
TWNK-202ENST00000370228 NUP88Q99567 741 aaPredicted RBP11.71□□□□□ -0.54
TWNK-202ENST00000370228 ELP3Q9H9T3 547 aa11.71□□□□□ -0.54
TWNK-202ENST00000370228 ARPP21Q9UBL0 812 aaPredicted RBP11.71□□□□□ -0.54
TWNK-202ENST00000370228 GSTT2P0CG29 244 aa11.7□□□□□ -0.54
TWNK-202ENST00000370228 GSTT2BP0CG30 244 aa11.7□□□□□ -0.54
TWNK-202ENST00000370228 CSE1LP55060 971 aaKnown RBP11.7□□□□□ -0.54
TWNK-202ENST00000370228 ITIH3Q06033 890 aa11.7□□□□□ -0.54
TWNK-202ENST00000370228 SHC4Q6S5L8 630 aa11.7□□□□□ -0.54
TWNK-202ENST00000370228 TRMT44Q8IYL2 757 aaKnown RBP11.7□□□□□ -0.54
TWNK-202ENST00000370228 SYT2Q8N9I0 419 aaPredicted RBP11.7□□□□□ -0.54
TWNK-202ENST00000370228 TSEN2Q8NCE0 465 aaKnown RBP11.7□□□□□ -0.54
TWNK-202ENST00000370228 LENG1Q96BZ8 264 aaPredicted RBP11.7□□□□□ -0.54
TWNK-202ENST00000370228 NAP1L3Q99457 506 aaPredicted RBP11.7□□□□□ -0.54
TWNK-202ENST00000370228 SIKE1Q9BRV8 207 aa11.7□□□□□ -0.54
TWNK-202ENST00000370228 ABT1Q9ULW3 272 aaKnown RBP11.7□□□□□ -0.54
TWNK-202ENST00000370228 LAMA4Q16363 1823 aa11.7□□□□□ -0.54
TWNK-202ENST00000370228 IFIT3O14879 490 aaKnown RBP11.7□□□□□ -0.54
TWNK-202ENST00000370228 KRT14P02533 472 aa11.7□□□□□ -0.54
TWNK-202ENST00000370228 NQO1P15559 274 aaKnown RBP11.7□□□□□ -0.54
TWNK-202ENST00000370228 CDK17Q00537 523 aa11.7□□□□□ -0.54
TWNK-202ENST00000370228 CCSAPQ6IQ19 270 aaPredicted RBP11.7□□□□□ -0.54
TWNK-202ENST00000370228 PIAS4Q8N2W9 510 aaPredicted RBP11.7□□□□□ -0.54
TWNK-202ENST00000370228 ACER1Q8TDN7 264 aa11.7□□□□□ -0.54
TWNK-202ENST00000370228 OTUD5Q96G74 571 aa11.7□□□□□ -0.54
TWNK-202ENST00000370228 CEP95Q96GE4 821 aa11.7□□□□□ -0.54
TWNK-202ENST00000370228 PANX2Q96RD6 677 aa11.7□□□□□ -0.54
TWNK-202ENST00000370228 ADAM22Q9P0K1 906 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms