RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 WDR18Q9BV38 432 aa11.8□□□□□ -0.52
LRIF1-201ENST00000369763 INTS2Q9H0H0 1204 aaKnown RBP11.8□□□□□ -0.52
LRIF1-201ENST00000369763 PARVGQ9HBI0 331 aa11.8□□□□□ -0.52
LRIF1-201ENST00000369763 SWAP70Q9UH65 585 aa11.8□□□□□ -0.52
LRIF1-201ENST00000369763 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.8□□□□□ -0.52
LRIF1-201ENST00000369763 CLRN2A0PK11 232 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 FRMD3A2A2Y4 597 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 GAS7O60861 476 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 SLITRK3O94933 977 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 VIMP08670 466 aaKnown RBP11.79□□□□□ -0.52
LRIF1-201ENST00000369763 SSTR3P32745 418 aaPredicted RBP11.79□□□□□ -0.52
LRIF1-201ENST00000369763 MYL7Q01449 175 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 SYDE2Q5VT97 1194 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 DAB2IPQ5VWQ8 1189 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 EPS8L3Q8TE67 593 aaKnown RBP11.79□□□□□ -0.52
LRIF1-201ENST00000369763 HOMER2Q9NSB8 354 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 SLC12A6Q9UHW9 1150 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 ALG6Q9Y672 507 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 MYO3BQ8WXR4 1341 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 PITPNM2Q9BZ72 1349 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 NAV1Q8NEY1 1877 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 SMCHD1A6NHR9 2005 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 SORBS3O60504 671 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 CPP00450 1065 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 FERP16591 822 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 FNTAP49354 379 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 FAM133BQ5BKY9 247 aaKnown RBP11.79□□□□□ -0.52
LRIF1-201ENST00000369763 EPM2AIP1Q7L775 607 aaPredicted RBP11.79□□□□□ -0.52
LRIF1-201ENST00000369763 KIRREL3Q8IZU9 778 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 ACER1Q8TDN7 264 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 TBC1D31Q96DN5 1066 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 PSMD1Q99460 953 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 METTL14Q9HCE5 456 aaKnown RBP11.79□□□□□ -0.52
LRIF1-201ENST00000369763 TCP10L2B9ZVM9 353 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 ARP10275 920 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 CHN1P15882 459 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 JAM2P57087 298 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 RRP1BQ14684 758 aaKnown RBP11.79□□□□□ -0.52
LRIF1-201ENST00000369763 CRY2Q49AN0 593 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 CCDC105Q8IYK2 499 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 CACNA2D3Q8IZS8 1091 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 SYCE1Q8N0S2 351 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 SLC30A5Q8TAD4 765 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 RFFLQ8WZ73 363 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 SUCLA2Q9P2R7 463 aaPredicted RBP11.79□□□□□ -0.52
LRIF1-201ENST00000369763 VAV3Q9UKW4 847 aa11.79□□□□□ -0.52
LRIF1-201ENST00000369763 LAMB2P55268 1798 aa11.78□□□□□ -0.52
LRIF1-201ENST00000369763 STRCQ7RTU9 1775 aa11.78□□□□□ -0.52
LRIF1-201ENST00000369763 MYH4Q9Y623 1939 aa11.78□□□□□ -0.52
LRIF1-201ENST00000369763 K7ENM7 598 aa11.78□□□□□ -0.52
LRIF1-201ENST00000369763 ACSL3O95573 720 aa11.78□□□□□ -0.52
LRIF1-201ENST00000369763 ARHGEF19Q8IW93 802 aa11.78□□□□□ -0.52
LRIF1-201ENST00000369763 PPM1KQ8N3J5 372 aa11.78□□□□□ -0.52
LRIF1-201ENST00000369763 HES6Q96HZ4 224 aa11.78□□□□□ -0.52
LRIF1-201ENST00000369763 ADAM33Q9BZ11 813 aa11.78□□□□□ -0.52
LRIF1-201ENST00000369763 COA1Q9GZY4 146 aa11.78□□□□□ -0.52
LRIF1-201ENST00000369763 SLC40A1Q9NP59 571 aa11.78□□□□□ -0.52
LRIF1-201ENST00000369763 KLC4Q9NSK0 619 aa11.78□□□□□ -0.52
LRIF1-201ENST00000369763 FBXO28Q9NVF7 368 aa11.78□□□□□ -0.52
LRIF1-201ENST00000369763 FAM198AQ9UFP1 575 aa11.78□□□□□ -0.52
LRIF1-201ENST00000369763 EMSYQ7Z589 1322 aa11.78□□□□□ -0.52
LRIF1-201ENST00000369763 GOLGA6L10A0A0M3HER8 536 aa11.78□□□□□ -0.52
LRIF1-201ENST00000369763 ANKRD63C9JTQ0 380 aa11.78□□□□□ -0.52
LRIF1-201ENST00000369763 TRAPPC3O43617 180 aa11.78□□□□□ -0.52
LRIF1-201ENST00000369763 MMEP08473 750 aa11.78□□□□□ -0.52
LRIF1-201ENST00000369763 BMP3P12645 472 aa11.78□□□□□ -0.52
LRIF1-201ENST00000369763 GJC1P36383 396 aa11.78□□□□□ -0.52
LRIF1-201ENST00000369763 MIGA2Q7L4E1 593 aa11.78□□□□□ -0.52
LRIF1-201ENST00000369763 JAMLQ86YT9 394 aa11.78□□□□□ -0.52
LRIF1-201ENST00000369763 CD302Q8IX05 232 aa11.78□□□□□ -0.52
LRIF1-201ENST00000369763 PRPF38AQ8NAV1 312 aaKnown RBP11.78□□□□□ -0.52
LRIF1-201ENST00000369763 ATP8B4Q8TF62 1192 aa11.78□□□□□ -0.52
LRIF1-201ENST00000369763 CBWD1Q9BRT8 395 aa11.78□□□□□ -0.52
LRIF1-201ENST00000369763 AGPAT3Q9NRZ7 376 aa11.78□□□□□ -0.52
LRIF1-201ENST00000369763 SPOPO43791 374 aa11.77□□□□□ -0.52
LRIF1-201ENST00000369763 EYA4O95677 639 aa11.77□□□□□ -0.52
LRIF1-201ENST00000369763 KIAA1755Q5JYT7 1200 aa11.77□□□□□ -0.52
LRIF1-201ENST00000369763 C10orf76Q5T2E6 689 aa11.77□□□□□ -0.52
LRIF1-201ENST00000369763 DENND2CQ68D51 928 aa11.77□□□□□ -0.52
LRIF1-201ENST00000369763 RPUSD2Q8IZ73 545 aaKnown RBP11.77□□□□□ -0.52
LRIF1-201ENST00000369763 PWWP2AQ96N64 755 aa11.77□□□□□ -0.52
LRIF1-201ENST00000369763 PRMT1Q99873 361 aaKnown RBP11.77□□□□□ -0.52
LRIF1-201ENST00000369763 ELAC2Q9BQ52 826 aaKnown RBP11.77□□□□□ -0.52
LRIF1-201ENST00000369763 KIFC3Q9BVG8 833 aa11.77□□□□□ -0.52
LRIF1-201ENST00000369763 GPRC5CQ9NQ84 441 aa11.77□□□□□ -0.52
LRIF1-201ENST00000369763 PRR12Q9ULL5 1215 aa11.77□□□□□ -0.52
LRIF1-201ENST00000369763 ZMYM2Q9UBW7 1377 aa11.77□□□□□ -0.52
LRIF1-201ENST00000369763 CCDC188H7C350 402 aa11.77□□□□□ -0.53
LRIF1-201ENST00000369763 DDX3YO15523 660 aaKnown RBP11.77□□□□□ -0.53
LRIF1-201ENST00000369763 TRIM37O94972 964 aa11.77□□□□□ -0.53
LRIF1-201ENST00000369763 RDXP35241 583 aaKnown RBP11.77□□□□□ -0.53
LRIF1-201ENST00000369763 PRKCIP41743 596 aa11.77□□□□□ -0.53
LRIF1-201ENST00000369763 PMS2P54278 862 aa11.77□□□□□ -0.53
LRIF1-201ENST00000369763 GKAP1Q5VSY0 366 aaPredicted RBP11.77□□□□□ -0.53
LRIF1-201ENST00000369763 PNMA8AQ86V59 439 aaPredicted RBP11.77□□□□□ -0.53
LRIF1-201ENST00000369763 CNPY4Q8N129 248 aa11.77□□□□□ -0.53
LRIF1-201ENST00000369763 ANKRD42Q8N9B4 389 aa11.77□□□□□ -0.53
LRIF1-201ENST00000369763 C1orf54Q8WWF1 131 aa11.77□□□□□ -0.53
LRIF1-201ENST00000369763 RNF25Q96BH1 459 aaPredicted RBP11.77□□□□□ -0.53
LRIF1-201ENST00000369763 THOC1Q96FV9 657 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms