RNA–Protein interactions for RNA: ENST00000369278.4

UFL1-201, Transcript of UFM1 specific ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFL1, Length 4,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFL1-201ENST00000369278 TRIM49P0CI25 452 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 TRIM49CP0CI26 452 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 BASP1P80723 227 aaKnown RBP8.26□□□□□ -1.09
UFL1-201ENST00000369278 KCNH2Q12809 1159 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 ITGB3BPQ13352 177 aaPredicted RBP8.26□□□□□ -1.09
UFL1-201ENST00000369278 EML3Q32P44 896 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 Q4G0T1 1027 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 CLEC4GQ6UXB4 293 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 DDX12PQ92771 950 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 DYNLL2Q96FJ2 89 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 BTBD6Q96KE9 485 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 RMDN2Q96LZ7 410 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 CNBD2Q96M20 576 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 NDNQ99608 321 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 SH2D3AQ9BRG2 576 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 PCDHA12Q9UN75 941 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.26□□□□□ -1.09
UFL1-201ENST00000369278 TTLL3Q9Y4R7 772 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 GOLGA4Q13439 2230 aaKnown RBP8.26□□□□□ -1.09
UFL1-201ENST00000369278 KIF1BO60333 1816 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 KLRF2D3W0D1 207 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 EPHB6O15197 1021 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 KRT36O76013 467 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 CYP2D6P10635 497 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 PYGBP11216 843 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 CCR3P51677 355 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 ROR2Q01974 943 aaKnown RBP8.26□□□□□ -1.09
UFL1-201ENST00000369278 UBE2SQ16763 222 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 USP17L6PQ6QN14 398 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 USP17L2Q6R6M4 530 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 TRIM50Q86XT4 487 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 KIAA2013Q8IYS2 634 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 CNKSR2Q8WXI2 1034 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 PWWP2AQ96N64 755 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 TRIM55Q9BYV6 548 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 FAM129AQ9BZQ8 928 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 ADGRL3Q9HAR2 1447 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 RNF14Q9UBS8 474 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 XDHP47989 1333 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 NPHP4O75161 1426 aaPredicted RBP8.26□□□□□ -1.09
UFL1-201ENST00000369278 USP17L3A6NCW0 530 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 USP17L4A6NCW7 530 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 KDM1AO60341 852 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 DCTN3O75935 186 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 MT-ND3P03897 115 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 MARK3P27448 753 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 LONP1P36776 959 aaKnown RBP8.26□□□□□ -1.09
UFL1-201ENST00000369278 PTDSS1P48651 473 aaKnown RBP8.26□□□□□ -1.09
UFL1-201ENST00000369278 SKOR1P84550 965 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 TAF1BQ53T94 588 aaPredicted RBP8.26□□□□□ -1.09
UFL1-201ENST00000369278 PRR16Q569H4 304 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 KIAA1755Q5JYT7 1200 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 USP17L1Q7RTZ2 530 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 TRIM59Q8IWR1 403 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 KLHL23Q8NBE8 558 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 GABPB2Q8TAK5 448 aaPredicted RBP8.26□□□□□ -1.09
UFL1-201ENST00000369278 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.26□□□□□ -1.09
UFL1-201ENST00000369278 EPAS1Q99814 870 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 GORASP1Q9BQQ3 440 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 BHMT2Q9H2M3 363 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 SLCO1B3Q9NPD5 702 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 OSGEPQ9NPF4 335 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 WARS2Q9UGM6 360 aaKnown RBP8.26□□□□□ -1.09
UFL1-201ENST00000369278 AGLP35573 1532 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 GOLGA8IPA6NC78 632 aa8.25□□□□□ -1.09
UFL1-201ENST00000369278 GOLGA8JA6NMD2 632 aa8.25□□□□□ -1.09
UFL1-201ENST00000369278 E9PMD0 336 aa8.25□□□□□ -1.09
UFL1-201ENST00000369278 SMAPO00193 183 aa8.25□□□□□ -1.09
UFL1-201ENST00000369278 DGKIO75912 1065 aa8.25□□□□□ -1.09
UFL1-201ENST00000369278 AFPP02771 609 aaKnown RBP8.25□□□□□ -1.09
UFL1-201ENST00000369278 SRGNP10124 158 aa8.25□□□□□ -1.09
UFL1-201ENST00000369278 ABCD1P33897 745 aa8.25□□□□□ -1.09
UFL1-201ENST00000369278 VHLP40337 213 aa8.25□□□□□ -1.09
UFL1-201ENST00000369278 MCL1Q07820 350 aa8.25□□□□□ -1.09
UFL1-201ENST00000369278 ASPHQ12797 758 aa8.25□□□□□ -1.09
UFL1-201ENST00000369278 KBTBD12Q3ZCT8 623 aa8.25□□□□□ -1.09
UFL1-201ENST00000369278 MIS18BP1Q6P0N0 1132 aa8.25□□□□□ -1.09
UFL1-201ENST00000369278 TRIM67Q6ZTA4 783 aa8.25□□□□□ -1.09
UFL1-201ENST00000369278 WDR75Q8IWA0 830 aaKnown RBP8.25□□□□□ -1.09
UFL1-201ENST00000369278 TATDN2Q93075 761 aa8.25□□□□□ -1.09
UFL1-201ENST00000369278 LRRC27Q9C0I9 530 aa8.25□□□□□ -1.09
UFL1-201ENST00000369278 TMEM60Q9H2L4 133 aa8.25□□□□□ -1.09
UFL1-201ENST00000369278 UBE2TQ9NPD8 197 aaPredicted RBP8.25□□□□□ -1.09
UFL1-201ENST00000369278 HPSEQ9Y251 543 aa8.25□□□□□ -1.09
UFL1-201ENST00000369278 PDE4DIPQ5VU43 2346 aa8.25□□□□□ -1.09
UFL1-201ENST00000369278 GIPC1O14908 333 aa8.25□□□□□ -1.09
UFL1-201ENST00000369278 CLDN3O15551 220 aa8.25□□□□□ -1.09
UFL1-201ENST00000369278 SHOX2O60902 331 aaPredicted RBP8.25□□□□□ -1.09
UFL1-201ENST00000369278 INHBAP08476 426 aa8.25□□□□□ -1.09
UFL1-201ENST00000369278 SLC16A2P36021 539 aa8.25□□□□□ -1.09
UFL1-201ENST00000369278 ITIH3Q06033 890 aa8.25□□□□□ -1.09
UFL1-201ENST00000369278 C16orf72Q14CZ0 275 aa8.25□□□□□ -1.09
UFL1-201ENST00000369278 ZYXQ15942 572 aaKnown RBP8.25□□□□□ -1.09
UFL1-201ENST00000369278 CROCCP2Q86T23 111 aa8.25□□□□□ -1.09
UFL1-201ENST00000369278 JAMLQ86YT9 394 aa8.25□□□□□ -1.09
UFL1-201ENST00000369278 PASD1Q8IV76 773 aa8.25□□□□□ -1.09
UFL1-201ENST00000369278 ADSSL1Q8N142 457 aa8.25□□□□□ -1.09
UFL1-201ENST00000369278 RNF148Q8N7C7 305 aa8.25□□□□□ -1.09
UFL1-201ENST00000369278 ERMNQ8TAM6 284 aa8.25□□□□□ -1.09
UFL1-201ENST00000369278 ANKS1AQ92625 1134 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms