RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 GOLGA8JA6NMD2 632 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 ZBBXA8MT70 800 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 ASNA1O43681 348 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 PRLP01236 227 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 LDHCP07864 332 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 RALGDSQ12967 914 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 ZNF274Q96GC6 653 aaPredicted RBP11.12□□□□□ -0.63
PRDM1-201ENST00000369089 PITPNM2Q9BZ72 1349 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 RPL5P46777 297 aaKnown RBP11.11□□□□□ -0.63
PRDM1-201ENST00000369089 SERPINB10P48595 397 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 NR1H3Q13133 447 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 PLEKHA7Q6IQ23 1121 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 BTN2A1Q7KYR7 527 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 EPM2AIP1Q7L775 607 aaPredicted RBP11.11□□□□□ -0.63
PRDM1-201ENST00000369089 SMYD1Q8NB12 490 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 VPS37AQ8NEZ2 397 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 FAM227BQ96M60 508 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 METTL22Q9BUU2 404 aaPredicted RBP11.11□□□□□ -0.63
PRDM1-201ENST00000369089 SMYD3Q9H7B4 428 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 GIN1Q9NXP7 522 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 RRN3Q9NYV6 651 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 PPARGC1AQ9UBK2 798 aaKnown RBP11.11□□□□□ -0.63
PRDM1-201ENST00000369089 PCDHGA3Q9Y5H0 932 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 A0A1B0GTH6 734 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 EIF4A3P38919 411 aaKnown RBP11.11□□□□□ -0.63
PRDM1-201ENST00000369089 TFCP2Q12800 502 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 WTAPQ15007 396 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 PPP6R3Q5H9R7 873 aaPredicted RBP11.11□□□□□ -0.63
PRDM1-201ENST00000369089 LGSNQ5TDP6 509 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 TCAIMQ8N3R3 496 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 PPWD1Q96BP3 646 aaKnown RBP11.11□□□□□ -0.63
PRDM1-201ENST00000369089 CCDC134Q9H6E4 229 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 RBM12Q9NTZ6 932 aaKnown RBP11.11□□□□□ -0.63
PRDM1-201ENST00000369089 PTTG2Q9NZH5 202 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 NIP7Q9Y221 180 aaKnown RBP eCLIP11.11□□□□□ -0.63
PRDM1-201ENST00000369089 RWDD3Q9Y3V2 267 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 ATP7BP35670 1465 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 SHROOM2Q13796 1616 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 XPO1O14980 1071 aaKnown RBP11.11□□□□□ -0.63
PRDM1-201ENST00000369089 PDE6AP16499 860 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 IFNA8P32881 189 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 ACADVLP49748 655 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 POLR2FP61218 127 aaKnown RBP11.11□□□□□ -0.63
PRDM1-201ENST00000369089 HIC1Q14526 733 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 CRACR2BQ8N4Y2 399 aaPredicted RBP11.11□□□□□ -0.63
PRDM1-201ENST00000369089 RPGRQ92834 1020 aaKnown RBP11.11□□□□□ -0.63
PRDM1-201ENST00000369089 SPATA16Q9BXB7 569 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 ISCUQ9H1K1 167 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 SLITRK6Q9H5Y7 841 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 PIH1D3Q9NQM4 214 aaKnown RBP11.11□□□□□ -0.63
PRDM1-201ENST00000369089 METTL5Q9NRN9 209 aaKnown RBP11.11□□□□□ -0.63
PRDM1-201ENST00000369089 SLAIN2Q9P270 581 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 TUBGCP4Q9UGJ1 667 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 ATP6V1HQ9UI12 483 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 DCTN4Q9UJW0 460 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 RBMX2Q9Y388 322 aaKnown RBP11.11□□□□□ -0.63
PRDM1-201ENST00000369089 TSPOAP1O95153 1857 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 HSPA6P17066 643 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 PTPN4P29074 926 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 TKTP29401 623 aaKnown RBP11.11□□□□□ -0.63
PRDM1-201ENST00000369089 CCNFP41002 786 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 EIF2B5Q13144 721 aaKnown RBP11.11□□□□□ -0.63
PRDM1-201ENST00000369089 PTK2BQ14289 1009 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 LPIN1Q14693 890 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 ELMSAN1Q6PJG2 1045 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 GPR141Q7Z602 305 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 ADAT2Q7Z6V5 191 aaKnown RBP11.11□□□□□ -0.63
PRDM1-201ENST00000369089 GALNT6Q8NCL4 622 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 NSUN7Q8NE18 718 aaKnown RBP11.11□□□□□ -0.63
PRDM1-201ENST00000369089 DEPTORQ8TB45 409 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 PAGR1Q9BTK6 254 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 MLXIPQ9HAP2 919 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 ZNF287Q9HBT7 754 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 RPL26L1Q9UNX3 145 aaKnown RBP11.11□□□□□ -0.63
PRDM1-201ENST00000369089 REREQ9P2R6 1566 aa11.11□□□□□ -0.63
PRDM1-201ENST00000369089 ZNF18P17022 549 aa11.1□□□□□ -0.63
PRDM1-201ENST00000369089 EPHB1P54762 984 aa11.1□□□□□ -0.63
PRDM1-201ENST00000369089 STX1BP61266 288 aa11.1□□□□□ -0.63
PRDM1-201ENST00000369089 SLC9C2Q5TAH2 1124 aa11.1□□□□□ -0.63
PRDM1-201ENST00000369089 CD302Q8IX05 232 aa11.1□□□□□ -0.63
PRDM1-201ENST00000369089 CCDC89Q8N998 374 aa11.1□□□□□ -0.63
PRDM1-201ENST00000369089 PLBD2Q8NHP8 589 aa11.1□□□□□ -0.63
PRDM1-201ENST00000369089 CCT6BQ92526 530 aa11.1□□□□□ -0.63
PRDM1-201ENST00000369089 PRPF18Q99633 342 aaKnown RBP11.1□□□□□ -0.63
PRDM1-201ENST00000369089 TUBGCP2Q9BSJ2 902 aa11.1□□□□□ -0.63
PRDM1-201ENST00000369089 EMC3Q9P0I2 261 aa11.1□□□□□ -0.63
PRDM1-201ENST00000369089 HTR3EA5X5Y0 456 aa11.1□□□□□ -0.63
PRDM1-201ENST00000369089 KCNQ3O43525 872 aa11.1□□□□□ -0.63
PRDM1-201ENST00000369089 STIP1P31948 543 aaKnown RBP11.1□□□□□ -0.63
PRDM1-201ENST00000369089 OXCT1P55809 520 aa11.1□□□□□ -0.63
PRDM1-201ENST00000369089 KYNUQ16719 465 aa11.1□□□□□ -0.63
PRDM1-201ENST00000369089 TMEM266Q2M3C6 531 aa11.1□□□□□ -0.63
PRDM1-201ENST00000369089 SFR1Q86XK3 245 aa11.1□□□□□ -0.63
PRDM1-201ENST00000369089 SRRM1Q8IYB3 904 aaKnown RBP11.1□□□□□ -0.63
PRDM1-201ENST00000369089 PAG1Q9NWQ8 432 aa11.1□□□□□ -0.63
PRDM1-201ENST00000369089 STX8Q9UNK0 236 aa11.1□□□□□ -0.63
PRDM1-201ENST00000369089 A6NJR5 290 aa11.1□□□□□ -0.63
PRDM1-201ENST00000369089 TTLL13PA6NNM8 815 aa11.1□□□□□ -0.63
PRDM1-201ENST00000369089 SPDYE16A6NNV3 312 aaPredicted RBP11.1□□□□□ -0.63
PRDM1-201ENST00000369089 A1BGP04217 495 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms