RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 DDIASQ8IXT1 998 aa19.39■□□□□ 0.69
SNX27-202ENST00000368841 CDHR1Q96JP9 859 aa19.39■□□□□ 0.69
SNX27-202ENST00000368841 MMEP08473 750 aa19.39■□□□□ 0.69
SNX27-202ENST00000368841 PRELPP51888 382 aa19.39■□□□□ 0.69
SNX27-202ENST00000368841 TRIML2Q8N7C3 387 aa19.39■□□□□ 0.69
SNX27-202ENST00000368841 SPON2Q9BUD6 331 aa19.39■□□□□ 0.69
SNX27-202ENST00000368841 GOLPH3LQ9H4A5 285 aa19.39■□□□□ 0.69
SNX27-202ENST00000368841 LRRC53A6NM62 1247 aa19.38■□□□□ 0.69
SNX27-202ENST00000368841 SYCE1LA8MT33 242 aa19.38■□□□□ 0.69
SNX27-202ENST00000368841 RASA4BC9J798 803 aa19.38■□□□□ 0.69
SNX27-202ENST00000368841 RASA4O43374 803 aa19.38■□□□□ 0.69
SNX27-202ENST00000368841 C11orf74Q86VG3 221 aa19.38■□□□□ 0.69
SNX27-202ENST00000368841 POLR3FQ9H1D9 316 aaPredicted RBP19.38■□□□□ 0.69
SNX27-202ENST00000368841 ADA2Q9NZK5 511 aa19.38■□□□□ 0.69
SNX27-202ENST00000368841 UBE3AQ05086 875 aa19.38■□□□□ 0.69
SNX27-202ENST00000368841 HIBCHQ6NVY1 386 aaPredicted RBP19.38■□□□□ 0.69
SNX27-202ENST00000368841 C2orf69Q8N8R5 385 aa19.38■□□□□ 0.69
SNX27-202ENST00000368841 DHX38Q92620 1227 aaKnown RBP19.38■□□□□ 0.69
SNX27-202ENST00000368841 CLCA2Q9UQC9 943 aa19.38■□□□□ 0.69
SNX27-202ENST00000368841 TMEM94Q12767 1356 aa19.38■□□□□ 0.69
SNX27-202ENST00000368841 ZNF500O60304 480 aaPredicted RBP19.38■□□□□ 0.69
SNX27-202ENST00000368841 RESTQ13127 1097 aa19.38■□□□□ 0.69
SNX27-202ENST00000368841 URGCPQ8TCY9 931 aa19.38■□□□□ 0.69
SNX27-202ENST00000368841 GABBR1Q9UBS5 961 aa19.38■□□□□ 0.69
SNX27-202ENST00000368841 GGT7Q9UJ14 662 aa19.38■□□□□ 0.69
SNX27-202ENST00000368841 ANGPTL2Q9UKU9 493 aa19.38■□□□□ 0.69
SNX27-202ENST00000368841 ERBB3P21860 1342 aa19.38■□□□□ 0.69
SNX27-202ENST00000368841 HUS1O60921 280 aa19.38■□□□□ 0.69
SNX27-202ENST00000368841 TSPY1Q01534 308 aa19.38■□□□□ 0.69
SNX27-202ENST00000368841 ALKBH5Q6P6C2 394 aaKnown RBP19.38■□□□□ 0.69
SNX27-202ENST00000368841 EPM2AIP1Q7L775 607 aaPredicted RBP19.38■□□□□ 0.69
SNX27-202ENST00000368841 SEPT12Q8IYM1 358 aa19.38■□□□□ 0.69
SNX27-202ENST00000368841 ABCC2Q92887 1545 aa19.38■□□□□ 0.69
SNX27-202ENST00000368841 BBOX1O75936 387 aa19.38■□□□□ 0.69
SNX27-202ENST00000368841 CCNE1P24864 410 aa19.38■□□□□ 0.69
SNX27-202ENST00000368841 FLOT2Q14254 428 aa19.38■□□□□ 0.69
SNX27-202ENST00000368841 TBC1D9BQ66K14 1250 aa19.38■□□□□ 0.69
SNX27-202ENST00000368841 TTLL6Q8N841 843 aa19.38■□□□□ 0.69
SNX27-202ENST00000368841 GIPC2Q8TF65 315 aa19.38■□□□□ 0.69
SNX27-202ENST00000368841 PITPNM3Q9BZ71 974 aa19.38■□□□□ 0.69
SNX27-202ENST00000368841 GTPBP10A4D1E9 387 aaKnown RBP19.37■□□□□ 0.69
SNX27-202ENST00000368841 STXBP2Q15833 593 aa19.37■□□□□ 0.69
SNX27-202ENST00000368841 SPATA33Q96N06 139 aa19.37■□□□□ 0.69
SNX27-202ENST00000368841 EPC1Q9H2F5 836 aa19.37■□□□□ 0.69
SNX27-202ENST00000368841 DHX36Q9H2U1 1008 aaKnown RBP19.37■□□□□ 0.69
SNX27-202ENST00000368841 HDAC6Q9UBN7 1215 aa19.37■□□□□ 0.69
SNX27-202ENST00000368841 SCOCQ9UIL1 159 aa19.37■□□□□ 0.69
SNX27-202ENST00000368841 TMEM62Q0P6H9 643 aa19.37■□□□□ 0.69
SNX27-202ENST00000368841 PDCLQ13371 301 aa19.37■□□□□ 0.69
SNX27-202ENST00000368841 THEMIS2Q5TEJ8 643 aa19.37■□□□□ 0.69
SNX27-202ENST00000368841 TRIM15Q9C019 465 aa19.37■□□□□ 0.69
SNX27-202ENST00000368841 CPB1P15086 417 aa19.37■□□□□ 0.69
SNX27-202ENST00000368841 HSPA6P17066 643 aa19.37■□□□□ 0.69
SNX27-202ENST00000368841 ATXN3P54252 364 aaPredicted RBP19.37■□□□□ 0.69
SNX27-202ENST00000368841 APBA1Q02410 837 aa19.37■□□□□ 0.69
SNX27-202ENST00000368841 PTPN12Q05209 780 aaKnown RBP19.37■□□□□ 0.69
SNX27-202ENST00000368841 PADI6Q6TGC4 694 aa19.37■□□□□ 0.69
SNX27-202ENST00000368841 SRRM1Q8IYB3 904 aaKnown RBP19.37■□□□□ 0.69
SNX27-202ENST00000368841 SYT2Q8N9I0 419 aaPredicted RBP19.37■□□□□ 0.69
SNX27-202ENST00000368841 WARS2Q9UGM6 360 aaKnown RBP19.37■□□□□ 0.69
SNX27-202ENST00000368841 ESYT3A0FGR9 886 aa19.37■□□□□ 0.69
SNX27-202ENST00000368841 TMEM247A6NEH6 219 aa19.37■□□□□ 0.69
SNX27-202ENST00000368841 CASP8Q14790 479 aa19.37■□□□□ 0.69
SNX27-202ENST00000368841 ANKMY2Q8IV38 441 aa19.37■□□□□ 0.69
SNX27-202ENST00000368841 PPM1NQ8N819 430 aa19.37■□□□□ 0.69
SNX27-202ENST00000368841 ULK4Q96C45 1275 aa19.37■□□□□ 0.69
SNX27-202ENST00000368841 MAPK13O15264 365 aa19.37■□□□□ 0.69
SNX27-202ENST00000368841 ATP9BO43861 1147 aa19.37■□□□□ 0.69
SNX27-202ENST00000368841 DNAJC8O75937 253 aaPredicted RBP19.37■□□□□ 0.69
SNX27-202ENST00000368841 UPP2O95045 317 aa19.37■□□□□ 0.69
SNX27-202ENST00000368841 COPS2P61201 443 aa19.37■□□□□ 0.69
SNX27-202ENST00000368841 NFRKBQ6P4R8 1299 aa19.37■□□□□ 0.69
SNX27-202ENST00000368841 PDIK1LQ8N165 341 aa19.37■□□□□ 0.69
SNX27-202ENST00000368841 FGFR1OP2Q9NVK5 253 aa19.37■□□□□ 0.69
SNX27-202ENST00000368841 GUCY2CP25092 1073 aa19.37■□□□□ 0.69
SNX27-202ENST00000368841 ENOX1Q8TC92 643 aaKnown RBP19.37■□□□□ 0.69
SNX27-202ENST00000368841 SERPINI1Q99574 410 aa19.37■□□□□ 0.69
SNX27-202ENST00000368841 SEC24DO94855 1032 aaPredicted RBP19.36■□□□□ 0.69
SNX27-202ENST00000368841 THEGQ9P2T0 379 aa19.36■□□□□ 0.69
SNX27-202ENST00000368841 ABCA5Q8WWZ7 1642 aa19.36■□□□□ 0.69
SNX27-202ENST00000368841 MCF2P10911 925 aa19.36■□□□□ 0.69
SNX27-202ENST00000368841 COPB2P35606 906 aa19.36■□□□□ 0.69
SNX27-202ENST00000368841 KCTD17Q8N5Z5 321 aa19.36■□□□□ 0.69
SNX27-202ENST00000368841 SUN2Q9UH99 717 aa19.36■□□□□ 0.69
SNX27-202ENST00000368841 ZNF335Q9H4Z2 1342 aaPredicted RBP19.36■□□□□ 0.69
SNX27-202ENST00000368841 hCG_2014768A0A024R1R8 64 aa19.36■□□□□ 0.69
SNX27-202ENST00000368841 NR3C1P04150 777 aa19.36■□□□□ 0.69
SNX27-202ENST00000368841 COASYQ13057 564 aa19.36■□□□□ 0.69
SNX27-202ENST00000368841 FAM117BQ6P1L5 589 aa19.36■□□□□ 0.69
SNX27-202ENST00000368841 SMAD5Q99717 465 aaKnown RBP19.36■□□□□ 0.69
SNX27-202ENST00000368841 ATG3Q9NT62 314 aa19.36■□□□□ 0.69
SNX27-202ENST00000368841 TMEM2Q9UHN6 1383 aa19.36■□□□□ 0.69
SNX27-202ENST00000368841 GNA15P30679 374 aa19.36■□□□□ 0.69
SNX27-202ENST00000368841 FAM160B2Q86V87 743 aa19.36■□□□□ 0.69
SNX27-202ENST00000368841 TEKT4Q8WW24 435 aa19.36■□□□□ 0.69
SNX27-202ENST00000368841 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.36■□□□□ 0.69
SNX27-202ENST00000368841 PRCPP42785 496 aa19.36■□□□□ 0.69
SNX27-202ENST00000368841 ZBED6P86452 979 aa19.36■□□□□ 0.69
SNX27-202ENST00000368841 GPS1Q13098 491 aa19.36■□□□□ 0.69
SNX27-202ENST00000368841 C1orf54Q8WWF1 131 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms