RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 MXD4Q14582 209 aaPredicted RBP15.39■□□□□ 0.05
TPM3-211ENST00000368531 MBTPS1Q14703 1052 aa15.39■□□□□ 0.05
TPM3-211ENST00000368531 FAM26DQ5JW98 314 aa15.39■□□□□ 0.05
TPM3-211ENST00000368531 FMR1NBQ8N0W7 255 aaPredicted RBP15.39■□□□□ 0.05
TPM3-211ENST00000368531 DAW1Q8N136 415 aa15.39■□□□□ 0.05
TPM3-211ENST00000368531 TMEM199Q8N511 208 aa15.39■□□□□ 0.05
TPM3-211ENST00000368531 RNF149Q8NC42 400 aa15.39■□□□□ 0.05
TPM3-211ENST00000368531 KIFAP3Q92845 792 aa15.39■□□□□ 0.05
TPM3-211ENST00000368531 PAGE5Q96GU1 130 aa15.39■□□□□ 0.05
TPM3-211ENST00000368531 BLZF1Q9H2G9 400 aa15.39■□□□□ 0.05
TPM3-211ENST00000368531 ADAMTS10Q9H324 1103 aa15.39■□□□□ 0.05
TPM3-211ENST00000368531 LMBRD1Q9NUN5 540 aa15.39■□□□□ 0.05
TPM3-211ENST00000368531 KBTBD4Q9NVX7 518 aa15.39■□□□□ 0.05
TPM3-211ENST00000368531 USP25Q9UHP3 1055 aa15.39■□□□□ 0.05
TPM3-211ENST00000368531 DNAH12Q6ZR08 3092 aa15.39■□□□□ 0.05
TPM3-211ENST00000368531 CCDC169A6NNP5 214 aa15.38■□□□□ 0.05
TPM3-211ENST00000368531 ASAP2O43150 1006 aa15.38■□□□□ 0.05
TPM3-211ENST00000368531 NBNO60934 754 aa15.38■□□□□ 0.05
TPM3-211ENST00000368531 TBCAO75347 108 aaKnown RBP15.38■□□□□ 0.05
TPM3-211ENST00000368531 FGFR4P22455 802 aa15.38■□□□□ 0.05
TPM3-211ENST00000368531 CRYBB1P53674 252 aaPredicted RBP15.38■□□□□ 0.05
TPM3-211ENST00000368531 FAM160A1Q05DH4 1040 aa15.38■□□□□ 0.05
TPM3-211ENST00000368531 CAPSQ13938 189 aa15.38■□□□□ 0.05
TPM3-211ENST00000368531 TFDP1Q14186 410 aa15.38■□□□□ 0.05
TPM3-211ENST00000368531 GPNMBQ14956 572 aa15.38■□□□□ 0.05
TPM3-211ENST00000368531 KRBA2Q6ZNG9 492 aa15.38■□□□□ 0.05
TPM3-211ENST00000368531 ENGASEQ8NFI3 743 aa15.38■□□□□ 0.05
TPM3-211ENST00000368531 TMEM40Q8WWA1 233 aa15.38■□□□□ 0.05
TPM3-211ENST00000368531 IFT74Q96LB3 600 aa15.38■□□□□ 0.05
TPM3-211ENST00000368531 DRC1Q96MC2 740 aa15.38■□□□□ 0.05
TPM3-211ENST00000368531 TIPINQ9BVW5 301 aa15.38■□□□□ 0.05
TPM3-211ENST00000368531 GCOM2Q9BZD3 368 aaPredicted RBP15.38■□□□□ 0.05
TPM3-211ENST00000368531 TNMDQ9H2S6 317 aa15.38■□□□□ 0.05
TPM3-211ENST00000368531 KCND2Q9NZV8 630 aa15.38■□□□□ 0.05
TPM3-211ENST00000368531 ASIC1P78348 528 aa15.37■□□□□ 0.05
TPM3-211ENST00000368531 CDC42EP1Q00587 391 aa15.37■□□□□ 0.05
TPM3-211ENST00000368531 FPGSQ05932 587 aa15.37■□□□□ 0.05
TPM3-211ENST00000368531 NFX1Q12986 1120 aaKnown RBP15.37■□□□□ 0.05
TPM3-211ENST00000368531 SNW1Q13573 536 aaKnown RBP15.37■□□□□ 0.05
TPM3-211ENST00000368531 CUL4BQ13620 913 aa15.37■□□□□ 0.05
TPM3-211ENST00000368531 LPIN1Q14693 890 aa15.37■□□□□ 0.05
TPM3-211ENST00000368531 PPP2R5AQ15172 486 aa15.37■□□□□ 0.05
TPM3-211ENST00000368531 FBXO47Q5MNV8 452 aa15.37■□□□□ 0.05
TPM3-211ENST00000368531 ZNF410Q86VK4 478 aa15.37■□□□□ 0.05
TPM3-211ENST00000368531 MYCT1Q8N699 235 aa15.37■□□□□ 0.05
TPM3-211ENST00000368531 DEPTORQ8TB45 409 aa15.37■□□□□ 0.05
TPM3-211ENST00000368531 KIFC3Q9BVG8 833 aa15.37■□□□□ 0.05
TPM3-211ENST00000368531 LRRC27Q9C0I9 530 aa15.37■□□□□ 0.05
TPM3-211ENST00000368531 AGO3Q9H9G7 860 aaKnown RBP15.37■□□□□ 0.05
TPM3-211ENST00000368531 MAGEF1Q9HAY2 307 aa15.37■□□□□ 0.05
TPM3-211ENST00000368531 ODF2LQ9ULJ1 636 aa15.37■□□□□ 0.05
TPM3-211ENST00000368531 NOC2LQ9Y3T9 749 aaKnown RBP15.37■□□□□ 0.05
TPM3-211ENST00000368531 TET1Q8NFU7 2136 aa15.37■□□□□ 0.05
TPM3-211ENST00000368531 KINO60870 393 aaKnown RBP15.36■□□□□ 0.05
TPM3-211ENST00000368531 RPS6KA5O75582 802 aa15.36■□□□□ 0.05
TPM3-211ENST00000368531 PRR29P0C7W0 189 aa15.36■□□□□ 0.05
TPM3-211ENST00000368531 DARSP14868 501 aaKnown RBP15.36■□□□□ 0.05
TPM3-211ENST00000368531 EIF4BP23588 611 aaKnown RBP15.36■□□□□ 0.05
TPM3-211ENST00000368531 CD52P31358 61 aa15.36■□□□□ 0.05
TPM3-211ENST00000368531 MAGEA10P43363 369 aaPredicted RBP15.36■□□□□ 0.05
TPM3-211ENST00000368531 PHKA2P46019 1235 aa15.36■□□□□ 0.05
TPM3-211ENST00000368531 DMP1Q13316 513 aaPredicted RBP15.36■□□□□ 0.05
TPM3-211ENST00000368531 PPIGQ13427 754 aaKnown RBP eCLIP15.36■□□□□ 0.054e-7■□□□□ 9.5
TPM3-211ENST00000368531 ODR4Q5SWX8 454 aa15.36■□□□□ 0.05
TPM3-211ENST00000368531 DNAJC19Q96DA6 116 aa15.36■□□□□ 0.05
TPM3-211ENST00000368531 C7orf25Q9BPX7 421 aa15.36■□□□□ 0.05
TPM3-211ENST00000368531 TRIM9Q9C026 710 aa15.36■□□□□ 0.05
TPM3-211ENST00000368531 IFT122Q9HBG6 1241 aa15.36■□□□□ 0.05
TPM3-211ENST00000368531 KMT5AQ9NQR1 393 aa15.36■□□□□ 0.05
TPM3-211ENST00000368531 PANK4Q9NVE7 773 aa15.36■□□□□ 0.05
TPM3-211ENST00000368531 DACT1Q9NYF0 836 aa15.36■□□□□ 0.05
TPM3-211ENST00000368531 TBC1D7Q9P0N9 293 aa15.36■□□□□ 0.05
TPM3-211ENST00000368531 INO80B-WBP1J3KQ70 363 aa15.35■□□□□ 0.05
TPM3-211ENST00000368531 SLC16A4O15374 487 aa15.35■□□□□ 0.05
TPM3-211ENST00000368531 PARNO95453 639 aaKnown RBP15.35■□□□□ 0.05
TPM3-211ENST00000368531 PLS3P13797 630 aa15.35■□□□□ 0.05
TPM3-211ENST00000368531 RFC2P35250 354 aa15.35■□□□□ 0.05
TPM3-211ENST00000368531 NAMPTP43490 491 aa15.35■□□□□ 0.05
TPM3-211ENST00000368531 NPTX2P47972 431 aa15.35■□□□□ 0.05
TPM3-211ENST00000368531 EPHB4P54760 987 aa15.35■□□□□ 0.05
TPM3-211ENST00000368531 PTENP60484 403 aa15.35■□□□□ 0.05
TPM3-211ENST00000368531 SFR1Q86XK3 245 aa15.35■□□□□ 0.05
TPM3-211ENST00000368531 ZBTB8OSQ8IWT0 167 aa15.35■□□□□ 0.05
TPM3-211ENST00000368531 CCDC65Q8IXS2 484 aa15.35■□□□□ 0.05
TPM3-211ENST00000368531 RPUSD2Q8IZ73 545 aaKnown RBP15.35■□□□□ 0.05
TPM3-211ENST00000368531 ZNF710Q8N1W2 664 aa15.35■□□□□ 0.05
TPM3-211ENST00000368531 DBF4BQ8NFT6 615 aa15.35■□□□□ 0.05
TPM3-211ENST00000368531 INO80BQ9C086 356 aaPredicted RBP15.35■□□□□ 0.05
TPM3-211ENST00000368531 MINDY3Q9H8M7 445 aa15.35■□□□□ 0.05
TPM3-211ENST00000368531 PARVGQ9HBI0 331 aa15.35■□□□□ 0.05
TPM3-211ENST00000368531 IL23AQ9NPF7 189 aa15.35■□□□□ 0.05
TPM3-211ENST00000368531 LARSQ9P2J5 1176 aaKnown RBP15.35■□□□□ 0.05
TPM3-211ENST00000368531 MKI67P46013 3256 aaKnown RBP15.34■□□□□ 0.05
TPM3-211ENST00000368531 GTPBP6O43824 516 aaPredicted RBP15.34■□□□□ 0.05
TPM3-211ENST00000368531 MCM4P33991 863 aa15.34■□□□□ 0.05
TPM3-211ENST00000368531 PAK2Q13177 524 aa15.34■□□□□ 0.05
TPM3-211ENST00000368531 TCTN1Q2MV58 587 aa15.34■□□□□ 0.05
TPM3-211ENST00000368531 HERC4Q5GLZ8 1057 aaPredicted RBP15.34■□□□□ 0.05
TPM3-211ENST00000368531 KANK3Q6NY19 840 aa15.34■□□□□ 0.05
TPM3-211ENST00000368531 TSHZ1Q6ZSZ6 1077 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms