RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 CDC42BPAQ5VT25 1732 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 PHLPP2Q6ZVD8 1323 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 CIITAP33076 1130 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 RFC1P35251 1148 aaPredicted RBP13.8□□□□□ -0.2
PTPRK-207ENST00000368226 PSMC5P62195 406 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 NNTQ13423 1086 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 TTC25Q96NG3 672 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 PANX2Q96RD6 677 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 SPZ1Q9BXG8 430 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 FSD1LQ9BXM9 530 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 PIDD1Q9HB75 910 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 SCINQ9Y6U3 715 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 FRMD3A2A2Y4 597 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 CTNND1O60716 968 aaKnown RBP13.8□□□□□ -0.2
PTPRK-207ENST00000368226 MYBP10242 640 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 DDX27Q96GQ7 796 aaKnown RBP13.8□□□□□ -0.2
PTPRK-207ENST00000368226 FMO2Q99518 471 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 OSBPL5Q9H0X9 879 aaPredicted RBP13.8□□□□□ -0.2
PTPRK-207ENST00000368226 KLHL11Q9NVR0 708 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 RBAKQ9NYW8 714 aaPredicted RBP13.8□□□□□ -0.2
PTPRK-207ENST00000368226 GGA3Q9NZ52 723 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 BCAP29Q9UHQ4 241 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 ZNRF3Q9ULT6 936 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 PIN4Q9Y237 131 aaKnown RBP13.8□□□□□ -0.2
PTPRK-207ENST00000368226 TULP4Q9NRJ4 1543 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 A0A1B0GUA9 196 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 A8MXQ7 604 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 GNGT2O14610 69 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 ZNF157P51786 506 aaPredicted RBP13.8□□□□□ -0.2
PTPRK-207ENST00000368226 DCAF4L1Q3SXM0 396 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 C12orf60Q5U649 245 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 EFCAB13Q8IY85 973 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 PPWD1Q96BP3 646 aaKnown RBP13.8□□□□□ -0.2
PTPRK-207ENST00000368226 FAM20AQ96MK3 541 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 TTC1Q99614 292 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 ZMYND12Q9H0C1 365 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 CEP72Q9P209 647 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 TRPM1Q7Z4N2 1603 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 DPYSL4O14531 572 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 YWHABP31946 246 aaKnown RBP13.8□□□□□ -0.2
PTPRK-207ENST00000368226 COG7P83436 770 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 DRAP1Q14919 205 aaPredicted RBP13.8□□□□□ -0.2
PTPRK-207ENST00000368226 CDC42EP5Q6NZY7 148 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 SZRD1Q7Z422 152 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 GLYCTKQ8IVS8 523 aa13.79□□□□□ -0.2
PTPRK-207ENST00000368226 MRPL4Q9BYD3 311 aaKnown RBP13.79□□□□□ -0.2
PTPRK-207ENST00000368226 TMEM39BQ9GZU3 492 aa13.79□□□□□ -0.2
PTPRK-207ENST00000368226 NEMP1O14524 444 aa13.79□□□□□ -0.2
PTPRK-207ENST00000368226 TEX33O43247 280 aa13.79□□□□□ -0.2
PTPRK-207ENST00000368226 SUN1O94901 812 aa13.79□□□□□ -0.2
PTPRK-207ENST00000368226 AP1B1Q10567 949 aa13.79□□□□□ -0.2
PTPRK-207ENST00000368226 BAATQ14032 418 aaPredicted RBP13.79□□□□□ -0.2
PTPRK-207ENST00000368226 SAMD7Q7Z3H4 446 aa13.79□□□□□ -0.2
PTPRK-207ENST00000368226 SPON1Q9HCB6 807 aa13.79□□□□□ -0.2
PTPRK-207ENST00000368226 CCDC195A0A1B0GUA6 201 aa13.79□□□□□ -0.2
PTPRK-207ENST00000368226 RASGRF2O14827 1237 aa13.79□□□□□ -0.2
PTPRK-207ENST00000368226 GSTA4O15217 222 aa13.79□□□□□ -0.2
PTPRK-207ENST00000368226 CYP2B6P20813 491 aa13.79□□□□□ -0.2
PTPRK-207ENST00000368226 PSMC1P62191 440 aaKnown RBP13.79□□□□□ -0.2
PTPRK-207ENST00000368226 DACT3Q96B18 629 aaPredicted RBP13.79□□□□□ -0.2
PTPRK-207ENST00000368226 IFT43Q96FT9 208 aa13.79□□□□□ -0.2
PTPRK-207ENST00000368226 GCOM2Q9BZD3 368 aaPredicted RBP13.79□□□□□ -0.2
PTPRK-207ENST00000368226 IQGAP3Q86VI3 1631 aa13.79□□□□□ -0.2
PTPRK-207ENST00000368226 CEP152O94986 1710 aa13.79□□□□□ -0.2
PTPRK-207ENST00000368226 CAMTA2O94983 1202 aa13.79□□□□□ -0.2
PTPRK-207ENST00000368226 ITPK1Q13572 414 aa13.79□□□□□ -0.2
PTPRK-207ENST00000368226 TAF1CQ15572 869 aaPredicted RBP13.79□□□□□ -0.2
PTPRK-207ENST00000368226 TMEM35BQ8NCS4 154 aa13.79□□□□□ -0.2
PTPRK-207ENST00000368226 CCDC197Q8NCU1 140 aa13.79□□□□□ -0.2
PTPRK-207ENST00000368226 CERKQ8TCT0 537 aa13.79□□□□□ -0.2
PTPRK-207ENST00000368226 SDCCAG3Q96C92 435 aa13.79□□□□□ -0.2
PTPRK-207ENST00000368226 MED4Q9NPJ6 270 aa13.79□□□□□ -0.2
PTPRK-207ENST00000368226 EMSYQ7Z589 1322 aa13.79□□□□□ -0.2
PTPRK-207ENST00000368226 TJP3O95049 919 aa13.78□□□□□ -0.2
PTPRK-207ENST00000368226 SFNP31947 248 aa13.78□□□□□ -0.2
PTPRK-207ENST00000368226 JPH1Q9HDC5 661 aaPredicted RBP13.78□□□□□ -0.2
PTPRK-207ENST00000368226 ABCB6Q9NP58 842 aa13.78□□□□□ -0.2
PTPRK-207ENST00000368226 PLEKHG2Q9H7P9 1386 aa13.78□□□□□ -0.2
PTPRK-207ENST00000368226 LGALS16A8MUM7 142 aa13.78□□□□□ -0.2
PTPRK-207ENST00000368226 KITP10721 976 aa13.78□□□□□ -0.2
PTPRK-207ENST00000368226 KRT10P13645 584 aa13.78□□□□□ -0.2
PTPRK-207ENST00000368226 PPP1R18Q6NYC8 613 aa13.78□□□□□ -0.2
PTPRK-207ENST00000368226 LAMC1P11047 1609 aa13.78□□□□□ -0.2
PTPRK-207ENST00000368226 SPHKAPQ2M3C7 1700 aa13.78□□□□□ -0.2
PTPRK-207ENST00000368226 DYNC1LI2O43237 492 aaPredicted RBP13.78□□□□□ -0.2
PTPRK-207ENST00000368226 GYS2P54840 703 aa13.78□□□□□ -0.2
PTPRK-207ENST00000368226 SHC4Q6S5L8 630 aa13.78□□□□□ -0.2
PTPRK-207ENST00000368226 CENPUQ71F23 418 aa13.78□□□□□ -0.2
PTPRK-207ENST00000368226 ZNF564Q8TBZ8 553 aaPredicted RBP13.78□□□□□ -0.2
PTPRK-207ENST00000368226 TTC17Q96AE7 1141 aa13.78□□□□□ -0.2
PTPRK-207ENST00000368226 MLXIPLQ9NP71 852 aa13.78□□□□□ -0.2
PTPRK-207ENST00000368226 ZNF70Q9UC06 446 aaPredicted RBP13.78□□□□□ -0.2
PTPRK-207ENST00000368226 POLRMTO00411 1230 aaKnown RBP13.78□□□□□ -0.2
PTPRK-207ENST00000368226 MX2P20592 715 aa13.78□□□□□ -0.2
PTPRK-207ENST00000368226 TTC4O95801 387 aa13.78□□□□□ -0.2
PTPRK-207ENST00000368226 ZBTB41Q5SVQ8 909 aa13.78□□□□□ -0.2
PTPRK-207ENST00000368226 MAP3K21Q5TCX8 1036 aa13.78□□□□□ -0.2
PTPRK-207ENST00000368226 PHLDB3Q6NSJ2 640 aa13.78□□□□□ -0.2
PTPRK-207ENST00000368226 NEDD1Q8NHV4 660 aa13.78□□□□□ -0.2
PTPRK-207ENST00000368226 ACOT2P49753 483 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms