RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 E4F1Q66K89 784 aaPredicted RBP13.23□□□□□ -0.29
PTPRK-203ENST00000368207 TMEM35BQ8NCS4 154 aa13.23□□□□□ -0.29
PTPRK-203ENST00000368207 CCT6BQ92526 530 aa13.23□□□□□ -0.29
PTPRK-203ENST00000368207 ZKSCAN4Q969J2 545 aaPredicted RBP13.23□□□□□ -0.29
PTPRK-203ENST00000368207 RASSF4Q9H2L5 321 aa13.23□□□□□ -0.29
PTPRK-203ENST00000368207 MYOM1P52179 1685 aa13.23□□□□□ -0.29
PTPRK-203ENST00000368207 MYO5BQ9ULV0 1848 aa13.23□□□□□ -0.29
PTPRK-203ENST00000368207 EIF3CLB5ME19 914 aaKnown RBP13.23□□□□□ -0.29
PTPRK-203ENST00000368207 MCF2LO15068 1137 aa13.23□□□□□ -0.29
PTPRK-203ENST00000368207 PRPSAP2O60256 369 aa13.23□□□□□ -0.29
PTPRK-203ENST00000368207 ACTN1P12814 892 aa13.23□□□□□ -0.29
PTPRK-203ENST00000368207 CCZ1BP86790 482 aa13.23□□□□□ -0.29
PTPRK-203ENST00000368207 CCZ1P86791 482 aaPredicted RBP13.23□□□□□ -0.29
PTPRK-203ENST00000368207 PDXDC1Q6P996 788 aa13.23□□□□□ -0.29
PTPRK-203ENST00000368207 DSTYKQ6XUX3 929 aa13.23□□□□□ -0.29
PTPRK-203ENST00000368207 RBM46Q8TBY0 533 aaKnown RBP13.23□□□□□ -0.29
PTPRK-203ENST00000368207 EIF3CQ99613 913 aaKnown RBP13.23□□□□□ -0.29
PTPRK-203ENST00000368207 AGXT2Q9BYV1 514 aa13.23□□□□□ -0.29
PTPRK-203ENST00000368207 MAGED2Q9UNF1 606 aaPredicted RBP13.23□□□□□ -0.29
PTPRK-203ENST00000368207 AGBL3Q8NEM8 1001 aa13.22□□□□□ -0.29
PTPRK-203ENST00000368207 SLC16A10Q8TF71 515 aa13.22□□□□□ -0.29
PTPRK-203ENST00000368207 RILPQ96NA2 401 aa13.22□□□□□ -0.29
PTPRK-203ENST00000368207 C19orf81C9J6K1 198 aa13.22□□□□□ -0.29
PTPRK-203ENST00000368207 GIPC1O14908 333 aa13.22□□□□□ -0.29
PTPRK-203ENST00000368207 PSMA2P25787 234 aa13.22□□□□□ -0.29
PTPRK-203ENST00000368207 SSTR3P32745 418 aaPredicted RBP13.22□□□□□ -0.29
PTPRK-203ENST00000368207 RPS6P62753 249 aaKnown RBP13.22□□□□□ -0.29
PTPRK-203ENST00000368207 PPP1R2P3Q6NXS1 205 aa13.22□□□□□ -0.29
PTPRK-203ENST00000368207 FASTKD5Q7L8L6 764 aaKnown RBP13.22□□□□□ -0.29
PTPRK-203ENST00000368207 FRMD5Q7Z6J6 570 aa13.22□□□□□ -0.29
PTPRK-203ENST00000368207 VPS52Q8N1B4 723 aa13.22□□□□□ -0.29
PTPRK-203ENST00000368207 SIX6OS1Q8N1H7 587 aa13.22□□□□□ -0.29
PTPRK-203ENST00000368207 MKRN1Q9UHC7 482 aaKnown RBP13.22□□□□□ -0.29
PTPRK-203ENST00000368207 NPEPPSP55786 919 aa13.22□□□□□ -0.29
PTPRK-203ENST00000368207 APBA1Q02410 837 aa13.22□□□□□ -0.29
PTPRK-203ENST00000368207 NR1I3Q14994 352 aa13.22□□□□□ -0.29
PTPRK-203ENST00000368207 DARS2Q6PI48 645 aaKnown RBP13.22□□□□□ -0.29
PTPRK-203ENST00000368207 VGLL2Q8N8G2 317 aa13.22□□□□□ -0.29
PTPRK-203ENST00000368207 FMO2Q99518 471 aa13.22□□□□□ -0.29
PTPRK-203ENST00000368207 INPP5FQ9Y2H2 1132 aa13.22□□□□□ -0.29
PTPRK-203ENST00000368207 SMIM22K7EJ46 135 aa13.21□□□□□ -0.29
PTPRK-203ENST00000368207 RPA1P27694 616 aa13.21□□□□□ -0.29
PTPRK-203ENST00000368207 ARL4AP40617 200 aa13.21□□□□□ -0.29
PTPRK-203ENST00000368207 FBXL13Q8NEE6 735 aa13.21□□□□□ -0.29
PTPRK-203ENST00000368207 TBK1Q9UHD2 729 aa13.21□□□□□ -0.29
PTPRK-203ENST00000368207 SNX24Q9Y343 169 aa13.21□□□□□ -0.29
PTPRK-203ENST00000368207 IQCA1LA6NCM1 817 aa13.21□□□□□ -0.29
PTPRK-203ENST00000368207 POLRMTO00411 1230 aaKnown RBP13.21□□□□□ -0.29
PTPRK-203ENST00000368207 DDR1Q08345 913 aa13.21□□□□□ -0.29
PTPRK-203ENST00000368207 PPP6R3Q5H9R7 873 aaPredicted RBP13.21□□□□□ -0.29
PTPRK-203ENST00000368207 CACNA2D3Q8IZS8 1091 aa13.21□□□□□ -0.29
PTPRK-203ENST00000368207 ARHGEF2Q92974 986 aaKnown RBP13.21□□□□□ -0.29
PTPRK-203ENST00000368207 MRPL4Q9BYD3 311 aaKnown RBP13.21□□□□□ -0.29
PTPRK-203ENST00000368207 TOPORSQ9NS56 1045 aaPredicted RBP13.21□□□□□ -0.29
PTPRK-203ENST00000368207 LRFN2Q9ULH4 789 aa13.21□□□□□ -0.29
PTPRK-203ENST00000368207 SCINQ9Y6U3 715 aa13.21□□□□□ -0.29
PTPRK-203ENST00000368207 FAM205AQ6ZU69 1335 aa13.21□□□□□ -0.29
PTPRK-203ENST00000368207 ESYT3A0FGR9 886 aa13.21□□□□□ -0.29
PTPRK-203ENST00000368207 ANO9A1A5B4 782 aa13.21□□□□□ -0.29
PTPRK-203ENST00000368207 ZRANB2O95218 330 aaKnown RBP eCLIP13.21□□□□□ -0.29
PTPRK-203ENST00000368207 ACOT2P49753 483 aa13.21□□□□□ -0.29
PTPRK-203ENST00000368207 GPC3P51654 580 aa13.21□□□□□ -0.29
PTPRK-203ENST00000368207 GKAP1Q5VSY0 366 aaPredicted RBP13.21□□□□□ -0.29
PTPRK-203ENST00000368207 GSPT2Q8IYD1 628 aaKnown RBP13.21□□□□□ -0.29
PTPRK-203ENST00000368207 GPD1LQ8N335 351 aa13.21□□□□□ -0.29
PTPRK-203ENST00000368207 GPATCH11Q8N954 259 aa13.21□□□□□ -0.29
PTPRK-203ENST00000368207 STMN2Q93045 179 aa13.21□□□□□ -0.29
PTPRK-203ENST00000368207 MCUR1Q96AQ8 359 aa13.21□□□□□ -0.29
PTPRK-203ENST00000368207 MXRA8Q9BRK3 442 aa13.21□□□□□ -0.29
PTPRK-203ENST00000368207 KCNH7Q9NS40 1196 aa13.21□□□□□ -0.29
PTPRK-203ENST00000368207 ATP8B1O43520 1251 aa13.21□□□□□ -0.3
PTPRK-203ENST00000368207 LPXNO60711 386 aa13.21□□□□□ -0.3
PTPRK-203ENST00000368207 IL1R1P14778 569 aa13.21□□□□□ -0.3
PTPRK-203ENST00000368207 FXR2P51116 673 aaKnown RBP eCLIP13.21□□□□□ -0.35e-7■■□□□ 12
PTPRK-203ENST00000368207 NBPF9Q3BBW0 867 aa13.21□□□□□ -0.3
PTPRK-203ENST00000368207 XKR3Q5GH77 459 aa13.21□□□□□ -0.3
PTPRK-203ENST00000368207 CATSPER3Q86XQ3 398 aa13.21□□□□□ -0.3
PTPRK-203ENST00000368207 DGAT1O75907 488 aa13.2□□□□□ -0.3
PTPRK-203ENST00000368207 PNMA6AP0CW24 399 aaPredicted RBP13.2□□□□□ -0.3
PTPRK-203ENST00000368207 CAP2P40123 477 aa13.2□□□□□ -0.3
PTPRK-203ENST00000368207 ARHGAP25P42331 645 aa13.2□□□□□ -0.3
PTPRK-203ENST00000368207 PKN1Q16512 942 aa13.2□□□□□ -0.3
PTPRK-203ENST00000368207 CCDC62Q6P9F0 684 aa13.2□□□□□ -0.3
PTPRK-203ENST00000368207 SDCCAG8Q86SQ7 713 aaPredicted RBP13.2□□□□□ -0.3
PTPRK-203ENST00000368207 HSPH1Q92598 858 aa13.2□□□□□ -0.3
PTPRK-203ENST00000368207 TAAR1Q96RJ0 339 aa13.2□□□□□ -0.3
PTPRK-203ENST00000368207 OSBPL9Q96SU4 736 aa13.2□□□□□ -0.3
PTPRK-203ENST00000368207 IFT122Q9HBG6 1241 aa13.2□□□□□ -0.3
PTPRK-203ENST00000368207 INTS9Q9NV88 658 aaKnown RBP13.2□□□□□ -0.3
PTPRK-203ENST00000368207 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.2□□□□□ -0.3
PTPRK-203ENST00000368207 SPDYE2BA6NHP3 402 aa13.2□□□□□ -0.3
PTPRK-203ENST00000368207 ATP1A1P05023 1023 aaKnown RBP13.2□□□□□ -0.3
PTPRK-203ENST00000368207 INHBAP08476 426 aa13.2□□□□□ -0.3
PTPRK-203ENST00000368207 SPDYE6P0CI01 402 aa13.2□□□□□ -0.3
PTPRK-203ENST00000368207 BBS9Q3SYG4 887 aa13.2□□□□□ -0.3
PTPRK-203ENST00000368207 KIAA1841Q6NSI8 718 aa13.2□□□□□ -0.3
PTPRK-203ENST00000368207 TC2NQ8N9U0 490 aa13.2□□□□□ -0.3
PTPRK-203ENST00000368207 C2orf40Q9H1Z8 148 aa13.2□□□□□ -0.3
PTPRK-203ENST00000368207 IL17RBQ9NRM6 502 aa13.2□□□□□ -0.3
PTPRK-203ENST00000368207 HSPBP1Q9NZL4 362 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms