RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 DHX9Q08211 1270 aaKnown RBP7.84□□□□□ -1.15
VTA1-202ENST00000367630 SGO2Q562F6 1265 aa7.84□□□□□ -1.15
VTA1-202ENST00000367630 MEI1Q5TIA1 1274 aa7.84□□□□□ -1.15
VTA1-202ENST00000367630 USP17L2Q6R6M4 530 aa7.84□□□□□ -1.15
VTA1-202ENST00000367630 CCDC13Q8IYE1 715 aa7.84□□□□□ -1.15
VTA1-202ENST00000367630 PLCD3Q8N3E9 789 aa7.84□□□□□ -1.15
VTA1-202ENST00000367630 FAM133AQ8N9E0 248 aa7.84□□□□□ -1.15
VTA1-202ENST00000367630 TRAIPQ9BWF2 469 aa7.84□□□□□ -1.15
VTA1-202ENST00000367630 KCNK9Q9NPC2 374 aa7.84□□□□□ -1.15
VTA1-202ENST00000367630 MAPK8IP1Q9UQF2 711 aa7.84□□□□□ -1.15
VTA1-202ENST00000367630 GGCXP38435 758 aa7.84□□□□□ -1.16
VTA1-202ENST00000367630 RHOT1Q8IXI2 618 aa7.84□□□□□ -1.16
VTA1-202ENST00000367630 GRAMD1CQ8IYS0 662 aa7.84□□□□□ -1.16
VTA1-202ENST00000367630 GPRASP2Q96D09 838 aa7.84□□□□□ -1.16
VTA1-202ENST00000367630 C8orf37Q96NL8 207 aa7.84□□□□□ -1.16
VTA1-202ENST00000367630 ANAPC5Q9UJX4 755 aa7.84□□□□□ -1.16
VTA1-202ENST00000367630 CCPG1Q9ULG6 757 aa7.84□□□□□ -1.16
VTA1-202ENST00000367630 COL22A1Q8NFW1 1626 aaPredicted RBP7.84□□□□□ -1.16
VTA1-202ENST00000367630 SERPINB4P48594 390 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 SPARCL1Q14515 664 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 KLHDC7AQ5VTJ3 777 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 RSAD2Q8WXG1 361 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 ZNF653Q96CK0 615 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 PURBQ96QR8 312 aaKnown RBP7.83□□□□□ -1.16
VTA1-202ENST00000367630 KMT5AQ9NQR1 393 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 FAM53CQ9NYF3 392 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 PPP2R3BQ9Y5P8 575 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 ZMYM2Q9UBW7 1377 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 UBAP1LF5GYI3 381 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 PSMD3O43242 534 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 ATP1A1P05023 1023 aaKnown RBP7.83□□□□□ -1.16
VTA1-202ENST00000367630 PLA2G4AP47712 749 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 FXR1P51114 621 aaKnown RBP eCLIP7.83□□□□□ -1.16
VTA1-202ENST00000367630 VSIG1Q86XK7 387 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 AGGF1Q8N302 714 aaeCLIP7.83□□□□□ -1.16
VTA1-202ENST00000367630 CHAMP1Q96JM3 812 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 PLIN2Q99541 437 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 NWD2Q9ULI1 1742 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 ADCY8P40145 1251 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 QARSP47897 775 aaKnown RBP7.83□□□□□ -1.16
VTA1-202ENST00000367630 VAMP7P51809 220 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 VSNL1P62760 191 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 GFM2Q969S9 779 aaKnown RBP7.83□□□□□ -1.16
VTA1-202ENST00000367630 GPHNQ9NQX3 736 aaPredicted RBP7.83□□□□□ -1.16
VTA1-202ENST00000367630 NOP53Q9NZM5 478 aaKnown RBP7.83□□□□□ -1.16
VTA1-202ENST00000367630 GTF3C4Q9UKN8 822 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 LOC102724159A0A0B4J2E5 919 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 ASAP2O43150 1006 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 LSM8O95777 96 aaKnown RBP7.83□□□□□ -1.16
VTA1-202ENST00000367630 ERBB2P04626 1255 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 PLS3P13797 630 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 PWP2Q15269 919 aaKnown RBP7.83□□□□□ -1.16
VTA1-202ENST00000367630 HSP90AA5PQ58FG0 334 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 FAM47CQ5HY64 1035 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.83□□□□□ -1.16
VTA1-202ENST00000367630 PPP4R1Q8TF05 950 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 ZDHHC15Q96MV8 337 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 ZNF277Q9NRM2 450 aaPredicted RBP7.83□□□□□ -1.16
VTA1-202ENST00000367630 FAM169AQ9Y6X4 670 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 C4AP0C0L4 1744 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 C4BP0C0L5 1744 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 RNF8O76064 485 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 GARTP22102 1010 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 HADHBP55084 474 aaKnown RBP7.83□□□□□ -1.16
VTA1-202ENST00000367630 MIGA2Q7L4E1 593 aa7.83□□□□□ -1.16
VTA1-202ENST00000367630 LRRC47Q8N1G4 583 aaKnown RBP7.83□□□□□ -1.16
VTA1-202ENST00000367630 AVENQ9NQS1 362 aaPredicted RBP7.83□□□□□ -1.16
VTA1-202ENST00000367630 FRMPD2Q68DX3 1309 aaPredicted RBP7.83□□□□□ -1.16
VTA1-202ENST00000367630 USP17L5A8MUK1 530 aa7.82□□□□□ -1.16
VTA1-202ENST00000367630 AP5Z1O43299 807 aa7.82□□□□□ -1.16
VTA1-202ENST00000367630 SNUPNO95149 360 aaKnown RBP7.82□□□□□ -1.16
VTA1-202ENST00000367630 SRGAP2BP0DMP2 458 aa7.82□□□□□ -1.16
VTA1-202ENST00000367630 HPDP32754 393 aaPredicted RBP7.82□□□□□ -1.16
VTA1-202ENST00000367630 PIK3CAP42336 1068 aa7.82□□□□□ -1.16
VTA1-202ENST00000367630 ARL4CP56559 192 aa7.82□□□□□ -1.16
VTA1-202ENST00000367630 RAD51AP2Q09MP3 1159 aa7.82□□□□□ -1.16
VTA1-202ENST00000367630 BFSP1Q12934 665 aa7.82□□□□□ -1.16
VTA1-202ENST00000367630 XKR9Q5GH70 373 aa7.82□□□□□ -1.16
VTA1-202ENST00000367630 TMEM8AQ9HCN3 771 aa7.82□□□□□ -1.16
VTA1-202ENST00000367630 RNF216Q9NWF9 866 aaPredicted RBP7.82□□□□□ -1.16
VTA1-202ENST00000367630 C19orf81C9J6K1 198 aa7.82□□□□□ -1.16
VTA1-202ENST00000367630 GUCY1A2P33402 732 aa7.82□□□□□ -1.16
VTA1-202ENST00000367630 CCT5P48643 541 aa7.82□□□□□ -1.16
VTA1-202ENST00000367630 APOBEC3FQ8IUX4 373 aaKnown RBP7.82□□□□□ -1.16
VTA1-202ENST00000367630 TRIM59Q8IWR1 403 aa7.82□□□□□ -1.16
VTA1-202ENST00000367630 ATL2Q8NHH9 583 aa7.82□□□□□ -1.16
VTA1-202ENST00000367630 BACH1O14867 736 aa7.82□□□□□ -1.16
VTA1-202ENST00000367630 CPP00450 1065 aa7.82□□□□□ -1.16
VTA1-202ENST00000367630 FMO5P49326 533 aa7.82□□□□□ -1.16
VTA1-202ENST00000367630 GRB10Q13322 594 aa7.82□□□□□ -1.16
VTA1-202ENST00000367630 PPP2R5CQ13362 524 aa7.82□□□□□ -1.16
VTA1-202ENST00000367630 ANKRD20A3Q5VUR7 823 aa7.82□□□□□ -1.16
VTA1-202ENST00000367630 ZNF746Q6NUN9 644 aaPredicted RBP7.82□□□□□ -1.16
VTA1-202ENST00000367630 SFR1Q86XK3 245 aa7.82□□□□□ -1.16
VTA1-202ENST00000367630 MAGEC3Q8TD91 643 aa7.82□□□□□ -1.16
VTA1-202ENST00000367630 MTMR9Q96QG7 549 aa7.82□□□□□ -1.16
VTA1-202ENST00000367630 IDI2Q9BXS1 227 aa7.82□□□□□ -1.16
VTA1-202ENST00000367630 RTFDC1Q9BY42 306 aaPredicted RBP7.82□□□□□ -1.16
VTA1-202ENST00000367630 GOLGA8CPA6NN73 597 aa7.82□□□□□ -1.16
VTA1-202ENST00000367630 BUB1O43683 1085 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms