RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 PET117Q6UWS5 81 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 CYFIP1Q7L576 1253 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 SHCBP1Q8NEM2 672 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 GIPC2Q8TF65 315 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 ZNF180Q9UJW8 692 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 PVALEFA0A1B0GWK0 134 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 ATP8B2P98198 1209 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 DSTYKQ6XUX3 929 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 C6orf62Q9GZU0 229 aaPredicted RBP4.01□□□□□ -1.77
SYNE1-207ENST00000367255 C17orf75Q9HAS0 396 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 LZTFL1Q9NQ48 299 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 MTRF1O75570 445 aaKnown RBP4□□□□□ -1.77
SYNE1-207ENST00000367255 CWF19L2Q2TBE0 894 aaKnown RBP4□□□□□ -1.77
SYNE1-207ENST00000367255 TTC27Q6P3X3 843 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 TESMINQ9Y4I5 508 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 NLRP12P59046 1061 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 PITRM1Q5JRX3 1037 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 ULK2Q8IYT8 1036 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 CCDC97Q96F63 343 aaPredicted RBP4□□□□□ -1.77
SYNE1-207ENST00000367255 NOP56O00567 594 aaKnown RBP4□□□□□ -1.77
SYNE1-207ENST00000367255 SORBS3O60504 671 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 IDEP14735 1019 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 TXNDC11Q6PKC3 985 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 MYCBPAPQ8TBZ2 947 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 CHAC2Q8WUX2 184 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 LRRC39Q96DD0 335 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 ETAA1Q9NY74 926 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 MKLN1Q9UL63 735 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 CAVIN3Q969G5 261 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 SYNRGQ9UMZ2 1314 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 CDK7P50613 346 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 HELQQ8TDG4 1101 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 CYFIP2Q96F07 1278 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 FAM111AQ96PZ2 611 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 EPAS1Q99814 870 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 DACT1Q9NYF0 836 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 LRRC7Q96NW7 1537 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 GTPBP10A4D1E9 387 aaKnown RBP4□□□□□ -1.77
SYNE1-207ENST00000367255 LRRC10BA6NIK2 292 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 PSMD11O00231 422 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 KLHL2O95198 593 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 VPS41P49754 854 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 TMEM132AQ24JP5 1023 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 POLR3CQ9BUI4 534 aaPredicted RBP4□□□□□ -1.77
SYNE1-207ENST00000367255 SLC39A14Q15043 492 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 AACSQ86V21 672 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 S100ZQ8WXG8 99 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 FAM25EA8MYX2 175 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 TM9SF1O15321 606 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 PENKP01210 267 aaPredicted RBP4□□□□□ -1.77
SYNE1-207ENST00000367255 TXNDC2Q86VQ3 553 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 TADA1Q96BN2 335 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 DDX47Q9H0S4 455 aaKnown RBP4□□□□□ -1.77
SYNE1-207ENST00000367255 VAPBO95292 243 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 POSTNQ15063 836 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 IGSF22Q8N9C0 903 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 ASB2Q96Q27 587 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 MRM3Q9HC36 420 aaKnown RBP4□□□□□ -1.77
SYNE1-207ENST00000367255 SYNJ1O43426 1573 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 ZBTB43O43298 467 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 FOSL2P15408 326 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 SLC45A4Q5BKX6 768 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 SUGT1Q9Y2Z0 365 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 SNX14Q9Y5W7 946 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 FESP07332 822 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 SRGAP2CP0DJJ0 459 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 HAVCR2Q8TDQ0 301 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 TBATAQ96M53 351 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 TMEM9Q9P0T7 183 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 KIF21AQ7Z4S6 1674 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 SPARCL1Q14515 664 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 AAGABQ6PD74 315 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 NEK8Q86SG6 692 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 DEDD2Q8WXF8 326 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 RNF26Q9BY78 433 aaPredicted RBP4□□□□□ -1.77
SYNE1-207ENST00000367255 PLEKHA5Q9HAU0 1116 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 CD320Q9NPF0 282 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 ANGEL1Q9UNK9 670 aaKnown RBP4□□□□□ -1.77
SYNE1-207ENST00000367255 DNMBPQ6XZF7 1577 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 SPAG7O75391 227 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 MMGT1Q8N4V1 131 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 GAKO14976 1311 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 HPDP32754 393 aaPredicted RBP4□□□□□ -1.77
SYNE1-207ENST00000367255 TMED10P49755 219 aaKnown RBP4□□□□□ -1.77
SYNE1-207ENST00000367255 ASIC2Q16515 512 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 GADD45GIP1Q8TAE8 222 aaPredicted RBP4□□□□□ -1.77
SYNE1-207ENST00000367255 URGCPQ8TCY9 931 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 ARHGEF1Q92888 912 aaKnown RBP4□□□□□ -1.77
SYNE1-207ENST00000367255 CNBD2Q96M20 576 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 WDR12Q9GZL7 423 aaKnown RBP4□□□□□ -1.77
SYNE1-207ENST00000367255 LMBRD1Q9NUN5 540 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 AKAP7Q9P0M2 348 aaPredicted RBP4□□□□□ -1.77
SYNE1-207ENST00000367255 SF3B1O75533 1304 aaKnown RBP eCLIP4□□□□□ -1.77
SYNE1-207ENST00000367255 MYLK4Q86YV6 388 aaPredicted RBP4□□□□□ -1.77
SYNE1-207ENST00000367255 MYO1HQ8N1T3 1032 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 AGR3Q8TD06 166 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 TSPYL4Q9UJ04 414 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 MDM2Q00987 491 aaPredicted RBP4□□□□□ -1.77
SYNE1-207ENST00000367255 TRIM16LQ309B1 348 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 BBS9Q3SYG4 887 aa4□□□□□ -1.77
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