RNA–Protein interactions for RNA: ENST00000366736.5

MRPL55-210, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-210ENST00000366736 SPPL3Q8TCT6 385 aa13.98□□□□□ -0.17
MRPL55-210ENST00000366736 PSPC1Q8WXF1 523 aaKnown RBP13.98□□□□□ -0.17
MRPL55-210ENST00000366736 TMEM117Q9H0C3 514 aa13.98□□□□□ -0.17
MRPL55-210ENST00000366736 TMEM60Q9H2L4 133 aa13.98□□□□□ -0.17
MRPL55-210ENST00000366736 ANKEF1Q9NU02 776 aa13.98□□□□□ -0.17
MRPL55-210ENST00000366736 RNF19AQ9NV58 838 aa13.98□□□□□ -0.17
MRPL55-210ENST00000366736 COL4A3BPQ9Y5P4 624 aa13.98□□□□□ -0.17
MRPL55-210ENST00000366736 XIRP2A4UGR9 3374 aa13.98□□□□□ -0.17
MRPL55-210ENST00000366736 TDRD15B5MCY1 1934 aaKnown RBP13.98□□□□□ -0.17
MRPL55-210ENST00000366736 MYH11P35749 1972 aa13.97□□□□□ -0.17
MRPL55-210ENST00000366736 TNFRSF10AO00220 468 aa13.97□□□□□ -0.17
MRPL55-210ENST00000366736 ASAP2O43150 1006 aa13.97□□□□□ -0.17
MRPL55-210ENST00000366736 CSDE1O75534 798 aaKnown RBP13.97□□□□□ -0.17
MRPL55-210ENST00000366736 FGFR1P11362 822 aa13.97□□□□□ -0.17
MRPL55-210ENST00000366736 XRCC6P12956 609 aaKnown RBP eCLIP13.97□□□□□ -0.17
MRPL55-210ENST00000366736 FGFR4P22455 802 aa13.97□□□□□ -0.17
MRPL55-210ENST00000366736 U2AF2P26368 475 aaKnown RBP eCLIP13.97□□□□□ -0.172e-8■□□□□ 10
MRPL55-210ENST00000366736 MCM7P33993 719 aa13.97□□□□□ -0.17
MRPL55-210ENST00000366736 TXKP42681 527 aa13.97□□□□□ -0.17
MRPL55-210ENST00000366736 TRAPPC10P48553 1259 aa13.97□□□□□ -0.17
MRPL55-210ENST00000366736 EMC2Q15006 297 aa13.97□□□□□ -0.17
MRPL55-210ENST00000366736 CSPP1Q1MSJ5 1256 aa13.97□□□□□ -0.17
MRPL55-210ENST00000366736 LEXMQ3ZCV2 418 aa13.97□□□□□ -0.17
MRPL55-210ENST00000366736 SRGAP1Q7Z6B7 1085 aa13.97□□□□□ -0.17
MRPL55-210ENST00000366736 KLHL23Q8NBE8 558 aa13.97□□□□□ -0.17
MRPL55-210ENST00000366736 TCP11Q8WWU5 503 aa13.97□□□□□ -0.17
MRPL55-210ENST00000366736 PRPF31Q8WWY3 499 aaKnown RBP13.97□□□□□ -0.17
MRPL55-210ENST00000366736 RSPH1Q8WYR4 309 aa13.97□□□□□ -0.17
MRPL55-210ENST00000366736 PABPC5Q96DU9 382 aaKnown RBP13.97□□□□□ -0.17
MRPL55-210ENST00000366736 NLRP4Q96MN2 994 aa13.97□□□□□ -0.17
MRPL55-210ENST00000366736 CASD1Q96PB1 797 aa13.97□□□□□ -0.17
MRPL55-210ENST00000366736 UHRF1Q96T88 793 aaPredicted RBP13.97□□□□□ -0.17
MRPL55-210ENST00000366736 UPF2Q9HAU5 1272 aaKnown RBP13.97□□□□□ -0.17
MRPL55-210ENST00000366736 IFT122Q9HBG6 1241 aa13.97□□□□□ -0.17
MRPL55-210ENST00000366736 ALG13Q9NP73 1137 aaKnown RBP13.97□□□□□ -0.17
MRPL55-210ENST00000366736 AAASQ9NRG9 546 aa13.97□□□□□ -0.17
MRPL55-210ENST00000366736 PCDHB12Q9Y5F1 795 aa13.97□□□□□ -0.17
MRPL55-210ENST00000366736 ZBTB39O15060 712 aa13.96□□□□□ -0.17
MRPL55-210ENST00000366736 ATF7P17544 494 aaPredicted RBP13.96□□□□□ -0.17
MRPL55-210ENST00000366736 IBSPP21815 317 aaPredicted RBP13.96□□□□□ -0.17
MRPL55-210ENST00000366736 UBE3AQ05086 875 aa13.96□□□□□ -0.17
MRPL55-210ENST00000366736 LAMTOR4Q0VGL1 99 aa13.96□□□□□ -0.17
MRPL55-210ENST00000366736 FERMT3Q86UX7 667 aa13.96□□□□□ -0.17
MRPL55-210ENST00000366736 KSR1Q8IVT5 923 aa13.96□□□□□ -0.17
MRPL55-210ENST00000366736 COLGALT1Q8NBJ5 622 aa13.96□□□□□ -0.17
MRPL55-210ENST00000366736 TMEM143Q96AN5 459 aa13.96□□□□□ -0.17
MRPL55-210ENST00000366736 MTRQ99707 1265 aa13.96□□□□□ -0.17
MRPL55-210ENST00000366736 CWH43Q9H720 699 aa13.96□□□□□ -0.17
MRPL55-210ENST00000366736 XPNPEP1Q9NQW7 623 aa13.96□□□□□ -0.17
MRPL55-210ENST00000366736 TYW1Q9NV66 732 aaKnown RBP13.96□□□□□ -0.17
MRPL55-210ENST00000366736 TRIP11Q15643 1979 aa13.95□□□□□ -0.18
MRPL55-210ENST00000366736 POTEMA6NI47 508 aa13.95□□□□□ -0.18
MRPL55-210ENST00000366736 ZNF623O75123 536 aa13.95□□□□□ -0.18
MRPL55-210ENST00000366736 DGAT1O75907 488 aa13.95□□□□□ -0.18
MRPL55-210ENST00000366736 OR52Z1P0C646 297 aa13.95□□□□□ -0.18
MRPL55-210ENST00000366736 SPATA31C1P0DKV0 1188 aa13.95□□□□□ -0.18
MRPL55-210ENST00000366736 SKIP12755 728 aa13.95□□□□□ -0.18
MRPL55-210ENST00000366736 LAG3P18627 525 aa13.95□□□□□ -0.18
MRPL55-210ENST00000366736 ATP2B1P20020 1258 aa13.95□□□□□ -0.18
MRPL55-210ENST00000366736 KCNA5P22460 613 aa13.95□□□□□ -0.18
MRPL55-210ENST00000366736 DNAJB1P25685 340 aa13.95□□□□□ -0.18
MRPL55-210ENST00000366736 PHKA2P46019 1235 aa13.95□□□□□ -0.18
MRPL55-210ENST00000366736 RARRES1P49788 294 aa13.95□□□□□ -0.18
MRPL55-210ENST00000366736 RAB27AP51159 221 aa13.95□□□□□ -0.18
MRPL55-210ENST00000366736 POU5F1BQ06416 359 aa13.95□□□□□ -0.18
MRPL55-210ENST00000366736 MXD4Q14582 209 aaPredicted RBP13.95□□□□□ -0.18
MRPL55-210ENST00000366736 PCBP1Q15365 356 aaKnown RBP eCLIP13.95□□□□□ -0.18
MRPL55-210ENST00000366736 CTC1Q2NKJ3 1217 aa13.95□□□□□ -0.18
MRPL55-210ENST00000366736 CLLU1OSQ5K130 101 aa13.95□□□□□ -0.18
MRPL55-210ENST00000366736 TTC38Q5R3I4 469 aa13.95□□□□□ -0.18
MRPL55-210ENST00000366736 LRRC55Q6ZSA7 311 aa13.95□□□□□ -0.18
MRPL55-210ENST00000366736 CATSPER4Q7RTX7 472 aa13.95□□□□□ -0.18
MRPL55-210ENST00000366736 LRRC43Q8N309 656 aa13.95□□□□□ -0.18
MRPL55-210ENST00000366736 POF1BQ8WVV4 589 aa13.95□□□□□ -0.18
MRPL55-210ENST00000366736 TBC1D32Q96NH3 1257 aa13.95□□□□□ -0.18
MRPL55-210ENST00000366736 POLR3CQ9BUI4 534 aaPredicted RBP13.95□□□□□ -0.18
MRPL55-210ENST00000366736 TUFT1Q9NNX1 390 aa13.95□□□□□ -0.18
MRPL55-210ENST00000366736 KIF3AQ9Y496 699 aa13.95□□□□□ -0.18
MRPL55-210ENST00000366736 MCM2P49736 904 aa13.94□□□□□ -0.18
MRPL55-210ENST00000366736 HYAL1Q12794 435 aa13.94□□□□□ -0.18
MRPL55-210ENST00000366736 GNL2Q13823 731 aaKnown RBP13.94□□□□□ -0.18
MRPL55-210ENST00000366736 ZNF174Q15697 407 aa13.94□□□□□ -0.18
MRPL55-210ENST00000366736 PUS10Q3MIT2 529 aaKnown RBP13.94□□□□□ -0.18
MRPL55-210ENST00000366736 SPOUT1Q5T280 376 aaKnown RBP13.94□□□□□ -0.18
MRPL55-210ENST00000366736 TWF2Q6IBS0 349 aaKnown RBP13.94□□□□□ -0.18
MRPL55-210ENST00000366736 CATSPER3Q86XQ3 398 aa13.94□□□□□ -0.18
MRPL55-210ENST00000366736 IFNLR1Q8IU57 520 aaPredicted RBP13.94□□□□□ -0.18
MRPL55-210ENST00000366736 ABI1Q8IZP0 508 aa13.94□□□□□ -0.18
MRPL55-210ENST00000366736 PPP2R3CQ969Q6 453 aa13.94□□□□□ -0.18
MRPL55-210ENST00000366736 TMX3Q96JJ7 454 aa13.94□□□□□ -0.18
MRPL55-210ENST00000366736 MRPL9Q9BYD2 267 aaKnown RBP13.94□□□□□ -0.18
MRPL55-210ENST00000366736 MINDY3Q9H8M7 445 aa13.94□□□□□ -0.18
MRPL55-210ENST00000366736 AGPAT5Q9NUQ2 364 aa13.94□□□□□ -0.18
MRPL55-210ENST00000366736 HCSTQ9UBK5 93 aa13.94□□□□□ -0.18
MRPL55-210ENST00000366736 NOL7Q9UMY1 257 aaKnown RBP13.94□□□□□ -0.18
MRPL55-210ENST00000366736 PIN4Q9Y237 131 aaKnown RBP13.94□□□□□ -0.18
MRPL55-210ENST00000366736 LZTS1Q9Y250 596 aa13.94□□□□□ -0.18
MRPL55-210ENST00000366736 FGF18O76093 207 aa13.93□□□□□ -0.18
MRPL55-210ENST00000366736 CD2BP2O95400 341 aaKnown RBP13.93□□□□□ -0.18
MRPL55-210ENST00000366736 SRGAP2CP0DJJ0 459 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms