RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 MRPS35P82673 323 aaKnown RBP0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 FMR1Q06787 632 aaKnown RBP eCLIP0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 RABEP1Q15276 862 aa0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 STILQ15468 1287 aa0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 TAF1CQ15572 869 aaPredicted RBP0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 ZYXQ15942 572 aaKnown RBP0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 DDB1Q16531 1140 aa0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 SEZ6Q53EL9 994 aa0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 OTUD3Q5T2D3 398 aaPredicted RBP0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 ATXN7L2Q5T6C5 722 aaPredicted RBP0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 TMEM200BQ69YZ2 307 aa0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 Q6ZNX1 250 aa0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 YTHDF3Q7Z739 585 aaKnown RBP0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 NEK8Q86SG6 692 aa0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 ZNF329Q86UD4 541 aa0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 RCBTB1Q8NDN9 531 aa0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 NPLOC4Q8TAT6 608 aa0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 WFIKKN2Q8TEU8 576 aa0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 ARL8AQ96BM9 186 aa0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 SARAFQ96BY9 339 aa0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 RCC1LQ96I51 464 aaKnown RBP0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 Q96MF0 132 aa0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 HAUS7Q99871 368 aa0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 NDC1Q9BTX1 674 aa0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 JAM3Q9BX67 310 aa0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 TEX101Q9BY14 249 aa0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 KLHL25Q9H0H3 589 aa0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 GBP3Q9H0R5 595 aa0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 CPNE5Q9HCH3 593 aa0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 LRIT1Q9P2V4 623 aa0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 DCTN4Q9UJW0 460 aa0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 ZNF214Q9UL59 606 aaPredicted RBP0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 CBLCQ9ULV8 474 aa0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 AK5Q9Y6K8 562 aa0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 C2orf78A6NCI8 922 aa0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 ARID3CA6NKF2 412 aa0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 KCNH1O95259 989 aa0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 EYA4O95677 639 aa0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 PLGP00747 810 aaPredicted RBP0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 CD1AP06126 327 aa0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 TGFB3P10600 412 aa0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 LCP1P13796 627 aa0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 FDXRP22570 491 aa0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 GNA15P30679 374 aa0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 MCM4P33991 863 aa0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 NOVP48745 357 aa0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 HTR6P50406 440 aa0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 NPEPPSP55786 919 aa0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 JAM2P57087 298 aa0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 DDR1Q08345 913 aa0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 SLC10A2Q12908 348 aaPredicted RBP0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 MOGSQ13724 837 aa0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 E4F1Q66K89 784 aaPredicted RBP0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 FCRLBQ6BAA4 426 aa0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 FBXL19Q6PCT2 694 aa0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 ZNF782Q6ZMW2 699 aaPredicted RBP0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 IRF2BP2Q7Z5L9 587 aa0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 PNPLA5Q7Z6Z6 429 aaPredicted RBP0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 PLXDC1Q8IUK5 500 aa0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 LPPQ93052 612 aa0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 SLC7A6OSQ96CW6 309 aaPredicted RBP0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 WNK4Q96J92 1243 aa0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 DCLRE1CQ96SD1 692 aaKnown RBP0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 TIMP4Q99727 224 aa0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 CDIP1Q9H305 208 aa0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 GALNT8Q9NY28 637 aa0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 ARHGAP28Q9P2N2 729 aa0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 RCAN3Q9UKA8 241 aa0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 SUGT1Q9Y2Z0 365 aa0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 CHST2Q9Y4C5 530 aa0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 RBM8AQ9Y5S9 174 aaKnown RBP0.74□□□□□ -2.29
RNU6-340P-201ENST00000364005 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 FAM90A10PA6NDY2 464 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 FAM90A8PA6NJQ4 464 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 ADAM10O14672 748 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 GREM1O60565 184 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 STC2O76061 302 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 HLA-DOAP06340 250 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 EPHX1P07099 455 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 FAM90A13PP0C7W8 464 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 FAM90A24PP0C7X0 464 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 SCP2P22307 547 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 EPHB2P29323 1055 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 MMP13P45452 471 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 CRKP46108 304 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 ZNF165P49910 485 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 ST13P50502 369 aaKnown RBP0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 CYP4F3Q08477 520 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 SCAPQ12770 1279 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 RESTQ13127 1097 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 LRRC41Q15345 812 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 GRAMD4Q6IC98 578 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 SLC2A7Q6PXP3 512 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 UNC5AQ6ZN44 842 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 APBB1IPQ7Z5R6 666 aaPredicted RBP0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 CUZD1Q86UP6 607 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 ADHFE1Q8IWW8 467 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 ACTRT2Q8TDY3 377 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 GCDHQ92947 438 aaPredicted RBP0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 THOC3Q96J01 351 aaKnown RBP0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms