RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 ZNF713Q8N859 430 aaPredicted RBP20.63■□□□□ 0.89
CMTM3-201ENST00000361909 TBC1D31Q96DN5 1066 aa20.63■□□□□ 0.89
CMTM3-201ENST00000361909 PLCD4Q9BRC7 762 aa20.63■□□□□ 0.89
CMTM3-201ENST00000361909 ZNF541Q9H0D2 1346 aa20.63■□□□□ 0.89
CMTM3-201ENST00000361909 KCNMB3Q9NPA1 279 aa20.63■□□□□ 0.89
CMTM3-201ENST00000361909 INTUQ9ULD6 942 aa20.63■□□□□ 0.89
CMTM3-201ENST00000361909 MYMKA6NI61 221 aa20.62■□□□□ 0.89
CMTM3-201ENST00000361909 ANP32DO95626 131 aa20.62■□□□□ 0.89
CMTM3-201ENST00000361909 GBP1P32455 592 aa20.62■□□□□ 0.89
CMTM3-201ENST00000361909 ACCSLQ4AC99 568 aa20.62■□□□□ 0.89
CMTM3-201ENST00000361909 NAIF1Q69YI7 327 aaPredicted RBP20.62■□□□□ 0.89
CMTM3-201ENST00000361909 BZW1Q7L1Q6 419 aaKnown RBP20.62■□□□□ 0.89
CMTM3-201ENST00000361909 NEK8Q86SG6 692 aa20.62■□□□□ 0.89
CMTM3-201ENST00000361909 GPC2Q8N158 579 aa20.62■□□□□ 0.89
CMTM3-201ENST00000361909 DCAF4Q8WV16 495 aa20.62■□□□□ 0.89
CMTM3-201ENST00000361909 SH3GL3Q99963 347 aa20.62■□□□□ 0.89
CMTM3-201ENST00000361909 ZMYND12Q9H0C1 365 aa20.62■□□□□ 0.89
CMTM3-201ENST00000361909 BLOC1S4Q9NUP1 217 aa20.62■□□□□ 0.89
CMTM3-201ENST00000361909 IBSPP21815 317 aaPredicted RBP20.62■□□□□ 0.89
CMTM3-201ENST00000361909 GCKP35557 465 aa20.62■□□□□ 0.89
CMTM3-201ENST00000361909 RNASE9P60153 205 aaKnown RBP20.62■□□□□ 0.89
CMTM3-201ENST00000361909 SARNPP82979 210 aaKnown RBP20.62■□□□□ 0.89
CMTM3-201ENST00000361909 DDX42Q86XP3 938 aaKnown RBP eCLIP20.62■□□□□ 0.89
CMTM3-201ENST00000361909 METTL13Q8N6R0 699 aa20.62■□□□□ 0.89
CMTM3-201ENST00000361909 GMCL1P1Q8NEA9 526 aa20.62■□□□□ 0.89
CMTM3-201ENST00000361909 CDK5RAP3Q96JB5 506 aa20.62■□□□□ 0.89
CMTM3-201ENST00000361909 RAB34Q9BZG1 259 aa20.62■□□□□ 0.89
CMTM3-201ENST00000361909 DDX47Q9H0S4 455 aaKnown RBP20.62■□□□□ 0.89
CMTM3-201ENST00000361909 SLC24A3Q9HC58 644 aa20.62■□□□□ 0.89
CMTM3-201ENST00000361909 SEC63Q9UGP8 760 aaKnown RBP20.62■□□□□ 0.89
CMTM3-201ENST00000361909 DCDC2CA8MYV0 355 aa20.61■□□□□ 0.89
CMTM3-201ENST00000361909 GDF11O95390 407 aa20.61■□□□□ 0.89
CMTM3-201ENST00000361909 AGTP01019 485 aa20.61■□□□□ 0.89
CMTM3-201ENST00000361909 GH2P01242 217 aa20.61■□□□□ 0.89
CMTM3-201ENST00000361909 CHN1P15882 459 aa20.61■□□□□ 0.89
CMTM3-201ENST00000361909 FXR2P51116 673 aaKnown RBP eCLIP20.61■□□□□ 0.89
CMTM3-201ENST00000361909 TRIM59Q8IWR1 403 aa20.61■□□□□ 0.89
CMTM3-201ENST00000361909 NEK9Q8TD19 979 aa20.61■□□□□ 0.89
CMTM3-201ENST00000361909 TCP11Q8WWU5 503 aa20.61■□□□□ 0.89
CMTM3-201ENST00000361909 ADAMTS1Q9UHI8 967 aa20.61■□□□□ 0.89
CMTM3-201ENST00000361909 CORO1CQ9ULV4 474 aaPredicted RBP20.61■□□□□ 0.89
CMTM3-201ENST00000361909 CCNT1O60563 726 aaKnown RBP20.61■□□□□ 0.89
CMTM3-201ENST00000361909 NQO1P15559 274 aaKnown RBP20.61■□□□□ 0.89
CMTM3-201ENST00000361909 GNA11P29992 359 aa20.61■□□□□ 0.89
CMTM3-201ENST00000361909 ADCY2Q08462 1091 aa20.61■□□□□ 0.89
CMTM3-201ENST00000361909 GRB10Q13322 594 aa20.61■□□□□ 0.89
CMTM3-201ENST00000361909 RASA3Q14644 834 aa20.61■□□□□ 0.89
CMTM3-201ENST00000361909 RRP1BQ14684 758 aaKnown RBP20.61■□□□□ 0.89
CMTM3-201ENST00000361909 HEATR3Q7Z4Q2 680 aa20.61■□□□□ 0.89
CMTM3-201ENST00000361909 TPCN2Q8NHX9 752 aa20.61■□□□□ 0.89
CMTM3-201ENST00000361909 HPS3Q969F9 1004 aa20.61■□□□□ 0.89
CMTM3-201ENST00000361909 NAP1L3Q99457 506 aaPredicted RBP20.61■□□□□ 0.89
CMTM3-201ENST00000361909 TMEM109Q9BVC6 243 aa20.61■□□□□ 0.89
CMTM3-201ENST00000361909 PACSIN1Q9BY11 444 aa20.61■□□□□ 0.89
CMTM3-201ENST00000361909 GANQ9H2C0 597 aa20.61■□□□□ 0.89
CMTM3-201ENST00000361909 FLOT1O75955 427 aa20.6■□□□□ 0.89
CMTM3-201ENST00000361909 EGFRP00533 1210 aa20.6■□□□□ 0.89
CMTM3-201ENST00000361909 CLTAP09496 248 aa20.6■□□□□ 0.89
CMTM3-201ENST00000361909 MKRN4PQ13434 485 aaPredicted RBP20.6■□□□□ 0.89
CMTM3-201ENST00000361909 TMEM266Q2M3C6 531 aa20.6■□□□□ 0.89
CMTM3-201ENST00000361909 BTNL9Q6UXG8 535 aa20.6■□□□□ 0.89
CMTM3-201ENST00000361909 SAMD7Q7Z3H4 446 aa20.6■□□□□ 0.89
CMTM3-201ENST00000361909 PEX26Q7Z412 305 aa20.6■□□□□ 0.89
CMTM3-201ENST00000361909 ZNF483Q8TF39 744 aaPredicted RBP20.6■□□□□ 0.89
CMTM3-201ENST00000361909 IFT74Q96LB3 600 aa20.6■□□□□ 0.89
CMTM3-201ENST00000361909 PABPC3Q9H361 631 aaKnown RBP20.6■□□□□ 0.89
CMTM3-201ENST00000361909 PNMA2Q9UL42 364 aa20.6■□□□□ 0.89
CMTM3-201ENST00000361909 STXBP5LQ9Y2K9 1186 aa20.6■□□□□ 0.89
CMTM3-201ENST00000361909 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.6■□□□□ 0.89
CMTM3-201ENST00000361909 FRMPD2Q68DX3 1309 aaPredicted RBP20.59■□□□□ 0.89
CMTM3-201ENST00000361909 FAM187AA6NFU0 413 aa20.59■□□□□ 0.89
CMTM3-201ENST00000361909 FLT3P36888 993 aa20.59■□□□□ 0.89
CMTM3-201ENST00000361909 PDE6CP51160 858 aa20.59■□□□□ 0.89
CMTM3-201ENST00000361909 CCNG1P51959 295 aa20.59■□□□□ 0.89
CMTM3-201ENST00000361909 PNMA8AQ86V59 439 aaPredicted RBP20.59■□□□□ 0.89
CMTM3-201ENST00000361909 RAD54LQ92698 747 aa20.59■□□□□ 0.89
CMTM3-201ENST00000361909 SPDL1Q96EA4 605 aa20.59■□□□□ 0.89
CMTM3-201ENST00000361909 SAAL1Q96ER3 474 aa20.59■□□□□ 0.89
CMTM3-201ENST00000361909 AP1M1Q9BXS5 423 aa20.59■□□□□ 0.89
CMTM3-201ENST00000361909 C6orf50Q9HD87 102 aa20.59■□□□□ 0.89
CMTM3-201ENST00000361909 AMACRQ9UHK6 382 aa20.59■□□□□ 0.89
CMTM3-201ENST00000361909 FRMD3A2A2Y4 597 aa20.59■□□□□ 0.89
CMTM3-201ENST00000361909 BACH1O14867 736 aa20.59■□□□□ 0.89
CMTM3-201ENST00000361909 SMNDC1O75940 238 aaKnown RBP eCLIP20.59■□□□□ 0.89
CMTM3-201ENST00000361909 PRKCIP41743 596 aa20.59■□□□□ 0.89
CMTM3-201ENST00000361909 CCNHP51946 323 aaPredicted RBP20.59■□□□□ 0.89
CMTM3-201ENST00000361909 POU5F1Q01860 360 aaKnown RBP20.59■□□□□ 0.89
CMTM3-201ENST00000361909 SHROOM1Q2M3G4 852 aaPredicted RBP20.59■□□□□ 0.89
CMTM3-201ENST00000361909 LETM2Q2VYF4 491 aa20.59■□□□□ 0.89
CMTM3-201ENST00000361909 C6orf118Q5T5N4 469 aa20.59■□□□□ 0.89
CMTM3-201ENST00000361909 DENND2CQ68D51 928 aa20.59■□□□□ 0.89
CMTM3-201ENST00000361909 APLFQ8IW19 511 aaPredicted RBP20.59■□□□□ 0.89
CMTM3-201ENST00000361909 ZC3H3Q8IXZ2 948 aaKnown RBP20.59■□□□□ 0.89
CMTM3-201ENST00000361909 FAM133AQ8N9E0 248 aa20.59■□□□□ 0.89
CMTM3-201ENST00000361909 GMCL1Q96IK5 515 aa20.59■□□□□ 0.89
CMTM3-201ENST00000361909 UBA5Q9GZZ9 404 aa20.59■□□□□ 0.89
CMTM3-201ENST00000361909 INTS9Q9NV88 658 aaKnown RBP20.59■□□□□ 0.89
CMTM3-201ENST00000361909 GPRC5DQ9NZD1 345 aa20.59■□□□□ 0.89
CMTM3-201ENST00000361909 CAND2O75155 1236 aa20.58■□□□□ 0.89
CMTM3-201ENST00000361909 WFS1O76024 890 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms