RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 LRFN2Q9ULH4 789 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 ARL2BPQ9Y2Y0 163 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 FAM32AQ9Y421 112 aaKnown RBP9.88□□□□□ -0.83
VPS13A-203ENST00000360280 DENND4BO75064 1496 aaPredicted RBP9.88□□□□□ -0.83
VPS13A-203ENST00000360280 LAMC3Q9Y6N6 1575 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 AKAP10O43572 662 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 RECQLP46063 649 aaPredicted RBP9.88□□□□□ -0.83
VPS13A-203ENST00000360280 MTHFSDQ2M296 383 aaKnown RBP9.88□□□□□ -0.83
VPS13A-203ENST00000360280 PAPOLBQ9NRJ5 636 aaKnown RBP9.88□□□□□ -0.83
VPS13A-203ENST00000360280 PCDHA4Q9UN74 947 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 KCNV2Q8TDN2 545 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 BFSP2Q13515 415 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 TRIM16LQ309B1 348 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 DPCR1Q3MIW9 517 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 ADCK5Q3MIX3 580 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 TNKSO95271 1327 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 DNAL1Q4LDG9 190 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 C16orf89Q6UX73 402 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 FGD2Q7Z6J4 655 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 ATP6V1G3Q96LB4 118 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 EIF4A3P38919 411 aaKnown RBP9.87□□□□□ -0.83
VPS13A-203ENST00000360280 ICA1Q05084 483 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 ITPRIPL1Q6GPH6 555 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 RWDD4Q6NW29 188 aaKnown RBP9.87□□□□□ -0.83
VPS13A-203ENST00000360280 RAB42Q8N4Z0 105 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 AMNQ9BXJ7 453 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 TMEM161AQ9NX61 479 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 TARSL2A2RTX5 802 aaKnown RBP9.87□□□□□ -0.83
VPS13A-203ENST00000360280 GCKRQ14397 625 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 STXBP2Q15833 593 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 NIM1KQ8IY84 436 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 GPKOWQ92917 476 aaPredicted RBP eCLIP9.87□□□□□ -0.835e-9■■■□□ 17.4
VPS13A-203ENST00000360280 COQ7Q99807 217 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 NRBP1Q9UHY1 535 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 THRAP3Q9Y2W1 955 aaKnown RBP9.87□□□□□ -0.83
VPS13A-203ENST00000360280 GGPS1O95749 300 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 ZNF18P17022 549 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 SERPINB3P29508 390 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 C5orf58C9J3I9 102 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 AP3B1O00203 1094 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 ZSCAN20P17040 1043 aaPredicted RBP9.87□□□□□ -0.83
VPS13A-203ENST00000360280 UVRAGQ9P2Y5 699 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.87□□□□□ -0.83
VPS13A-203ENST00000360280 INPP5FQ9Y2H2 1132 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 POLR1AO95602 1720 aaPredicted RBP9.87□□□□□ -0.83
VPS13A-203ENST00000360280 CLEC4FQ8N1N0 589 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 COG1Q8WTW3 980 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 EPS8L2Q9H6S3 715 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 PRUNE1Q86TP1 453 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 PLEKHA8Q96JA3 519 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 ZSWIM6Q9HCJ5 1215 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 H0YIN7 160 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 TBC1D19Q8N5T2 526 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 INSRP06213 1382 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 PRPF4O43172 522 aaKnown RBP eCLIP9.87□□□□□ -0.832e-6■■□□□ 14
VPS13A-203ENST00000360280 CCND2P30279 289 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 MXI1P50539 228 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 NLRP14Q86W24 1093 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 ASZ1Q8WWH4 475 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 CASS4Q9NQ75 786 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 PCDHA1Q9Y5I3 950 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 EDC4Q6P2E9 1401 aaKnown RBP9.87□□□□□ -0.83
VPS13A-203ENST00000360280 CERKLQ49MI3 558 aaPredicted RBP9.87□□□□□ -0.83
VPS13A-203ENST00000360280 FAM47AQ5JRC9 791 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 RABGAP1LQ5R372 815 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 TSSK1BQ9BXA7 367 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 EPN3Q9H201 632 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 TK2O00142 265 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 DHX34Q14147 1143 aaKnown RBP9.87□□□□□ -0.83
VPS13A-203ENST00000360280 C16orf72Q14CZ0 275 aa9.87□□□□□ -0.83
VPS13A-203ENST00000360280 COBLO75128 1261 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 FMNL1O95466 1100 aaPredicted RBP9.86□□□□□ -0.83
VPS13A-203ENST00000360280 LDHAP00338 332 aaKnown RBP9.86□□□□□ -0.83
VPS13A-203ENST00000360280 PAGR1Q9BTK6 254 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 CLIC4Q9Y696 253 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 MAPKBP1O60336 1514 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 SCFD1Q8WVM8 642 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 AURKCQ9UQB9 309 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 AP4S1Q9Y587 144 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 BTBD18B2RXH4 712 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 MAP3K13O43283 966 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 TTC23LQ6PF05 361 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 EFHBQ8N7U6 833 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 EEF2KMTQ96G04 330 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 OSBPL9Q96SU4 736 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 SOX13Q9UN79 622 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 DLGAP3O95886 979 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 MFN1Q8IWA4 741 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 PROM2Q8N271 834 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 TRIM63Q969Q1 353 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 CMTM5Q96DZ9 223 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 HEXIM2Q96MH2 286 aaKnown RBP9.86□□□□□ -0.83
VPS13A-203ENST00000360280 NDST4Q9H3R1 872 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 ZWILCHQ9H900 591 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 CFAP69A5D8W1 941 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 POU5F1BQ06416 359 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 RMDN1Q96DB5 314 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 EGFL8Q99944 293 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 APOL6Q9BWW8 343 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 SMG5Q9UPR3 1016 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms