RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 ATP1A3P13637 1013 aa27.39■■□□□ 1.97
SHARPIN-201ENST00000359551 SCP2P22307 547 aa27.39■■□□□ 1.97
SHARPIN-201ENST00000359551 KLRC1P26715 233 aa27.39■■□□□ 1.97
SHARPIN-201ENST00000359551 KCNA1Q09470 495 aa27.39■■□□□ 1.97
SHARPIN-201ENST00000359551 EDRF1Q3B7T1 1238 aa27.39■■□□□ 1.97
SHARPIN-201ENST00000359551 MARCH8Q5T0T0 291 aa27.39■■□□□ 1.97
SHARPIN-201ENST00000359551 CSGALNACT2Q8N6G5 542 aa27.39■■□□□ 1.97
SHARPIN-201ENST00000359551 RETREG2Q8NC44 543 aa27.39■■□□□ 1.97
SHARPIN-201ENST00000359551 THAP9Q9H5L6 903 aa27.39■■□□□ 1.97
SHARPIN-201ENST00000359551 HMX1Q9NP08 348 aaPredicted RBP27.39■■□□□ 1.97
SHARPIN-201ENST00000359551 ARHGAP28Q9P2N2 729 aa27.39■■□□□ 1.97
SHARPIN-201ENST00000359551 ADGRA3Q8IWK6 1321 aa27.39■■□□□ 1.97
SHARPIN-201ENST00000359551 NRCAMQ92823 1304 aa27.39■■□□□ 1.97
SHARPIN-201ENST00000359551 HTTP42858 3142 aa27.38■■□□□ 1.97
SHARPIN-201ENST00000359551 TRIP12Q14669 1992 aaPredicted RBP27.38■■□□□ 1.97
SHARPIN-201ENST00000359551 CCDC169A6NNP5 214 aa27.38■■□□□ 1.97
SHARPIN-201ENST00000359551 H0YCG3 227 aa27.38■■□□□ 1.97
SHARPIN-201ENST00000359551 SMIM10L2AP0DMW4 78 aa27.38■■□□□ 1.97
SHARPIN-201ENST00000359551 SMIM10L2BP0DMW5 78 aa27.38■■□□□ 1.97
SHARPIN-201ENST00000359551 ABCD1P33897 745 aa27.38■■□□□ 1.97
SHARPIN-201ENST00000359551 IGBP1P78318 339 aa27.38■■□□□ 1.97
SHARPIN-201ENST00000359551 CCSAPQ6IQ19 270 aaPredicted RBP27.38■■□□□ 1.97
SHARPIN-201ENST00000359551 EFCAB12Q6NXP0 572 aa27.38■■□□□ 1.97
SHARPIN-201ENST00000359551 ZC3H3Q8IXZ2 948 aaKnown RBP27.38■■□□□ 1.97
SHARPIN-201ENST00000359551 LRRC71Q8N4P6 559 aa27.38■■□□□ 1.97
SHARPIN-201ENST00000359551 PSPC1Q8WXF1 523 aaKnown RBP27.38■■□□□ 1.97
SHARPIN-201ENST00000359551 MTG1Q9BT17 334 aaPredicted RBP27.38■■□□□ 1.97
SHARPIN-201ENST00000359551 SUGCTQ9HAC7 445 aa27.38■■□□□ 1.97
SHARPIN-201ENST00000359551 TYW1Q9NV66 732 aaKnown RBP27.38■■□□□ 1.97
SHARPIN-201ENST00000359551 MXD4Q14582 209 aaPredicted RBP27.37■■□□□ 1.97
SHARPIN-201ENST00000359551 MTHFD1LQ6UB35 978 aa27.37■■□□□ 1.97
SHARPIN-201ENST00000359551 IRF2BP1Q8IU81 584 aa27.37■■□□□ 1.97
SHARPIN-201ENST00000359551 PRPF31Q8WWY3 499 aaKnown RBP27.37■■□□□ 1.97
SHARPIN-201ENST00000359551 SRRTQ9BXP5 876 aaKnown RBP27.37■■□□□ 1.97
SHARPIN-201ENST00000359551 TGFB1I1O43294 461 aa27.36■■□□□ 1.97
SHARPIN-201ENST00000359551 LMBR1Q8WVP7 490 aa27.36■■□□□ 1.97
SHARPIN-201ENST00000359551 KIFC3Q9BVG8 833 aa27.36■■□□□ 1.97
SHARPIN-201ENST00000359551 TMEM206Q9H813 350 aa27.36■■□□□ 1.97
SHARPIN-201ENST00000359551 HOXC8P31273 242 aa27.36■■□□□ 1.97
SHARPIN-201ENST00000359551 DNM2P50570 870 aa27.36■■□□□ 1.97
SHARPIN-201ENST00000359551 ADAM17P78536 824 aa27.36■■□□□ 1.97
SHARPIN-201ENST00000359551 CAPSQ13938 189 aa27.36■■□□□ 1.97
SHARPIN-201ENST00000359551 NFIL3Q16649 462 aa27.36■■□□□ 1.97
SHARPIN-201ENST00000359551 LRRC55Q6ZSA7 311 aa27.36■■□□□ 1.97
SHARPIN-201ENST00000359551 KSR1Q8IVT5 923 aa27.36■■□□□ 1.97
SHARPIN-201ENST00000359551 ACCSQ96QU6 501 aa27.36■■□□□ 1.97
SHARPIN-201ENST00000359551 SETD4Q9NVD3 440 aa27.36■■□□□ 1.97
SHARPIN-201ENST00000359551 SUCLA2Q9P2R7 463 aaPredicted RBP27.36■■□□□ 1.97
SHARPIN-201ENST00000359551 MBLAC1A4D2B0 266 aaPredicted RBP27.35■■□□□ 1.97
SHARPIN-201ENST00000359551 FKBP3Q00688 224 aaKnown RBP27.35■■□□□ 1.97
SHARPIN-201ENST00000359551 SPAG1Q07617 926 aa27.35■■□□□ 1.97
SHARPIN-201ENST00000359551 LHX8Q68G74 356 aa27.35■■□□□ 1.97
SHARPIN-201ENST00000359551 ANP32BQ92688 251 aaKnown RBP27.35■■□□□ 1.97
SHARPIN-201ENST00000359551 ZBTB10Q96DT7 871 aa27.35■■□□□ 1.97
SHARPIN-201ENST00000359551 TBX20Q9UMR3 447 aa27.35■■□□□ 1.97
SHARPIN-201ENST00000359551 DENND3A2RUS2 1198 aa27.34■■□□□ 1.97
SHARPIN-201ENST00000359551 ASAP2O43150 1006 aa27.34■■□□□ 1.97
SHARPIN-201ENST00000359551 CALUO43852 315 aaPredicted RBP27.34■■□□□ 1.97
SHARPIN-201ENST00000359551 CLCN3P51790 818 aa27.34■■□□□ 1.97
SHARPIN-201ENST00000359551 FANCCQ00597 558 aa27.34■■□□□ 1.97
SHARPIN-201ENST00000359551 PLCB2Q00722 1185 aa27.34■■□□□ 1.97
SHARPIN-201ENST00000359551 LAMTOR4Q0VGL1 99 aa27.34■■□□□ 1.97
SHARPIN-201ENST00000359551 MAP4K3Q8IVH8 894 aa27.34■■□□□ 1.97
SHARPIN-201ENST00000359551 METTL13Q8N6R0 699 aa27.34■■□□□ 1.97
SHARPIN-201ENST00000359551 PCSK9Q8NBP7 692 aaKnown RBP27.34■■□□□ 1.97
SHARPIN-201ENST00000359551 GBP3Q9H0R5 595 aa27.34■■□□□ 1.97
SHARPIN-201ENST00000359551 FGFR1OPO95684 399 aaKnown RBP27.33■■□□□ 1.97
SHARPIN-201ENST00000359551 HSP90AA4PQ58FG1 418 aa27.33■■□□□ 1.97
SHARPIN-201ENST00000359551 CXCL17Q6UXB2 119 aa27.33■■□□□ 1.97
SHARPIN-201ENST00000359551 SH3TC2Q8TF17 1288 aa27.33■■□□□ 1.97
SHARPIN-201ENST00000359551 CEP63Q96MT8 703 aa27.33■■□□□ 1.97
SHARPIN-201ENST00000359551 ADCY5O95622 1261 aa27.33■■□□□ 1.97
SHARPIN-201ENST00000359551 CDK11BP21127 795 aaKnown RBP27.33■■□□□ 1.97
SHARPIN-201ENST00000359551 TMOD1P28289 359 aa27.33■■□□□ 1.97
SHARPIN-201ENST00000359551 KCNA10Q16322 511 aa27.33■■□□□ 1.97
SHARPIN-201ENST00000359551 CDCA2Q69YH5 1023 aaPredicted RBP27.33■■□□□ 1.97
SHARPIN-201ENST00000359551 TAS1R3Q7RTX0 852 aa27.33■■□□□ 1.97
SHARPIN-201ENST00000359551 APTXQ7Z2E3 356 aaKnown RBP27.33■■□□□ 1.97
SHARPIN-201ENST00000359551 RNF180Q86T96 592 aa27.33■■□□□ 1.97
SHARPIN-201ENST00000359551 DEPTORQ8TB45 409 aa27.33■■□□□ 1.97
SHARPIN-201ENST00000359551 GOLGA5Q8TBA6 731 aa27.33■■□□□ 1.97
SHARPIN-201ENST00000359551 TMEM174Q8WUU8 243 aa27.33■■□□□ 1.97
SHARPIN-201ENST00000359551 TRIM5Q9C035 493 aa27.33■■□□□ 1.97
SHARPIN-201ENST00000359551 CGNQ9P2M7 1197 aaKnown RBP27.33■■□□□ 1.97
SHARPIN-201ENST00000359551 LRRIQ4A6NIV6 560 aa27.32■■□□□ 1.96
SHARPIN-201ENST00000359551 ASGR1P07306 291 aa27.32■■□□□ 1.96
SHARPIN-201ENST00000359551 HSPA8P11142 646 aaKnown RBP27.32■■□□□ 1.96
SHARPIN-201ENST00000359551 EEF1GP26641 437 aaKnown RBP27.32■■□□□ 1.96
SHARPIN-201ENST00000359551 SNRPFP62306 86 aaKnown RBP27.32■■□□□ 1.96
SHARPIN-201ENST00000359551 POU5F1BQ06416 359 aa27.32■■□□□ 1.96
SHARPIN-201ENST00000359551 HIC1Q14526 733 aa27.32■■□□□ 1.96
SHARPIN-201ENST00000359551 TCP11X2Q5H9J9 407 aa27.32■■□□□ 1.96
SHARPIN-201ENST00000359551 NFRKBQ6P4R8 1299 aa27.32■■□□□ 1.96
SHARPIN-201ENST00000359551 FAM114A1Q8IWE2 563 aa27.32■■□□□ 1.96
SHARPIN-201ENST00000359551 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.32■■□□□ 1.962e-6■■□□□ 11.7
SHARPIN-201ENST00000359551 IKZF4Q9H2S9 585 aa27.32■■□□□ 1.96
SHARPIN-201ENST00000359551 TMEM134Q9H6X4 195 aa27.32■■□□□ 1.96
SHARPIN-201ENST00000359551 LIMA1Q9UHB6 759 aaKnown RBP27.32■■□□□ 1.96
SHARPIN-201ENST00000359551 EXOC7Q9UPT5 735 aa27.32■■□□□ 1.96
SHARPIN-201ENST00000359551 LRRC10BA6NIK2 292 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms