RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 GTPBP10A4D1E9 387 aaKnown RBP19.59■□□□□ 0.73
SHANK1-202ENST00000359082 GPC5P78333 572 aa19.59■□□□□ 0.73
SHANK1-202ENST00000359082 CIAPIN1Q6FI81 312 aa19.59■□□□□ 0.73
SHANK1-202ENST00000359082 UNC13DQ70J99 1090 aa19.59■□□□□ 0.73
SHANK1-202ENST00000359082 TTC8Q8TAM2 541 aa19.59■□□□□ 0.73
SHANK1-202ENST00000359082 EXOC4Q96A65 974 aa19.59■□□□□ 0.73
SHANK1-202ENST00000359082 RNF25Q96BH1 459 aaPredicted RBP19.59■□□□□ 0.73
SHANK1-202ENST00000359082 NR3C1P04150 777 aa19.59■□□□□ 0.73
SHANK1-202ENST00000359082 GRAPQ13588 217 aa19.59■□□□□ 0.73
SHANK1-202ENST00000359082 ACBD5Q5T8D3 534 aaPredicted RBP19.59■□□□□ 0.73
SHANK1-202ENST00000359082 ELMSAN1Q6PJG2 1045 aa19.59■□□□□ 0.73
SHANK1-202ENST00000359082 GRAPLQ8TC17 118 aaPredicted RBP19.59■□□□□ 0.73
SHANK1-202ENST00000359082 HLA-DPA1P20036 260 aa19.59■□□□□ 0.73
SHANK1-202ENST00000359082 CCNYL1Q8N7R7 359 aa19.59■□□□□ 0.73
SHANK1-202ENST00000359082 NEMP1O14524 444 aa19.59■□□□□ 0.73
SHANK1-202ENST00000359082 NCK2O43639 380 aa19.59■□□□□ 0.73
SHANK1-202ENST00000359082 PMS2P54278 862 aa19.59■□□□□ 0.73
SHANK1-202ENST00000359082 ZNF211Q13398 564 aaPredicted RBP19.59■□□□□ 0.73
SHANK1-202ENST00000359082 CCDC90BQ9GZT6 254 aa19.59■□□□□ 0.73
SHANK1-202ENST00000359082 OSBPL3Q9H4L5 887 aa19.59■□□□□ 0.73
SHANK1-202ENST00000359082 ABHD10Q9NUJ1 306 aa19.59■□□□□ 0.73
SHANK1-202ENST00000359082 PCSK1NQ9UHG2 260 aa19.59■□□□□ 0.73
SHANK1-202ENST00000359082 TSPY1Q01534 308 aa19.59■□□□□ 0.73
SHANK1-202ENST00000359082 ARL6IP4Q66PJ3 421 aaKnown RBP19.59■□□□□ 0.73
SHANK1-202ENST00000359082 NUDCD3Q8IVD9 361 aa19.59■□□□□ 0.73
SHANK1-202ENST00000359082 LRRC23Q53EV4 343 aaPredicted RBP19.58■□□□□ 0.73
SHANK1-202ENST00000359082 ULK4Q96C45 1275 aa19.58■□□□□ 0.73
SHANK1-202ENST00000359082 STRIP2Q9ULQ0 834 aa19.58■□□□□ 0.73
SHANK1-202ENST00000359082 HUS1O60921 280 aa19.58■□□□□ 0.73
SHANK1-202ENST00000359082 TMEM94Q12767 1356 aa19.58■□□□□ 0.73
SHANK1-202ENST00000359082 GRAMD4Q6IC98 578 aa19.58■□□□□ 0.73
SHANK1-202ENST00000359082 RNF135Q8IUD6 432 aa19.58■□□□□ 0.73
SHANK1-202ENST00000359082 ZNF668Q96K58 619 aaPredicted RBP19.58■□□□□ 0.73
SHANK1-202ENST00000359082 ADORA2BP29275 332 aa19.58■□□□□ 0.73
SHANK1-202ENST00000359082 E2F4Q16254 413 aa19.58■□□□□ 0.73
SHANK1-202ENST00000359082 ZNF772Q68DY9 489 aaPredicted RBP19.58■□□□□ 0.73
SHANK1-202ENST00000359082 FBXO38Q6PIJ6 1188 aa19.58■□□□□ 0.73
SHANK1-202ENST00000359082 FAM95CA0A1B0GW59 222 aa19.58■□□□□ 0.72
SHANK1-202ENST00000359082 E9PMD0 336 aa19.58■□□□□ 0.72
SHANK1-202ENST00000359082 GGCXP38435 758 aa19.58■□□□□ 0.72
SHANK1-202ENST00000359082 DAB2P98082 770 aa19.58■□□□□ 0.72
SHANK1-202ENST00000359082 RHPN2Q8IUC4 686 aa19.58■□□□□ 0.72
SHANK1-202ENST00000359082 TMEM260Q9NX78 707 aa19.58■□□□□ 0.72
SHANK1-202ENST00000359082 ADA2Q9NZK5 511 aa19.58■□□□□ 0.72
SHANK1-202ENST00000359082 TMCC1O94876 653 aa19.58■□□□□ 0.72
SHANK1-202ENST00000359082 PDHA1P08559 390 aa19.58■□□□□ 0.72
SHANK1-202ENST00000359082 EFTUD2Q15029 972 aaKnown RBP eCLIP19.58■□□□□ 0.72
SHANK1-202ENST00000359082 SUSD4Q5VX71 490 aa19.58■□□□□ 0.72
SHANK1-202ENST00000359082 C11orf70Q9BRQ4 267 aa19.58■□□□□ 0.72
SHANK1-202ENST00000359082 TRIM33Q9UPN9 1127 aa19.58■□□□□ 0.72
SHANK1-202ENST00000359082 DIAPH2O60879 1101 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 OCA2Q04671 838 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 PTPN12Q05209 780 aaKnown RBP19.57■□□□□ 0.72
SHANK1-202ENST00000359082 PTK2BQ14289 1009 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 KLHL38Q2WGJ6 581 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 TWF2Q6IBS0 349 aaKnown RBP19.57■□□□□ 0.72
SHANK1-202ENST00000359082 EGFL8Q99944 293 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 TEX12Q9BXU0 123 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 UGGT1Q9NYU2 1555 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 KRT38O76015 456 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 STXBP2Q15833 593 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 SLFNL1Q499Z3 407 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 TBC1D9BQ66K14 1250 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 LRRC31Q6UY01 552 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 ZNF564Q8TBZ8 553 aaPredicted RBP19.57■□□□□ 0.72
SHANK1-202ENST00000359082 VCPP55072 806 aaKnown RBP19.57■□□□□ 0.72
SHANK1-202ENST00000359082 COASYQ13057 564 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 ACCSLQ4AC99 568 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 TMEM179Q6ZVK1 233 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 FASTKD5Q7L8L6 764 aaKnown RBP19.57■□□□□ 0.72
SHANK1-202ENST00000359082 DCTN4Q9UJW0 460 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 PADI6Q6TGC4 694 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 SLC26A7Q8TE54 656 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 GJB4Q9NTQ9 266 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 NOP53Q9NZM5 478 aaKnown RBP19.57■□□□□ 0.72
SHANK1-202ENST00000359082 PRPF4O43172 522 aaKnown RBP eCLIP19.57■□□□□ 0.72
SHANK1-202ENST00000359082 CALB1P05937 261 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 AP3B2Q13367 1082 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 ARHGEF25Q86VW2 580 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 SP110Q9HB58 689 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 ZNF302Q9NR11 478 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 SNX5Q9Y5X3 404 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 CFAP69A5D8W1 941 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 PRR29P0C7W0 189 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 PHKA2P46019 1235 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 MAGOHP61326 146 aaKnown RBP19.57■□□□□ 0.72
SHANK1-202ENST00000359082 DEUP1Q05D60 604 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 EMBQ6PCB8 327 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 BEST2Q8NFU1 509 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 TSC22D3Q99576 134 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 CPVLQ9H3G5 476 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 ATG3Q9NT62 314 aa19.57■□□□□ 0.72
SHANK1-202ENST00000359082 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.56■□□□□ 0.72
SHANK1-202ENST00000359082 ANKRD65E5RJM6 399 aa19.56■□□□□ 0.72
SHANK1-202ENST00000359082 DPYSL4O14531 572 aa19.56■□□□□ 0.72
SHANK1-202ENST00000359082 BLVRAP53004 296 aa19.56■□□□□ 0.72
SHANK1-202ENST00000359082 TAS2R42Q7RTR8 314 aa19.56■□□□□ 0.72
SHANK1-202ENST00000359082 PPM1NQ8N819 430 aa19.56■□□□□ 0.72
SHANK1-202ENST00000359082 URGCPQ8TCY9 931 aa19.56■□□□□ 0.72
SHANK1-202ENST00000359082 NAF1Q96HR8 494 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms