RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 KSR1Q8IVT5 923 aa16.27■□□□□ 0.19
GABPB1-202ENST00000359031 SMAP1Q8IYB5 467 aaPredicted RBP16.27■□□□□ 0.19
GABPB1-202ENST00000359031 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.27■□□□□ 0.19
GABPB1-202ENST00000359031 HNRNPLLQ8WVV9 542 aaKnown RBP16.27■□□□□ 0.19
GABPB1-202ENST00000359031 MOV10L1Q9BXT6 1211 aaKnown RBP16.27■□□□□ 0.19
GABPB1-202ENST00000359031 TSKSQ9UJT2 592 aa16.27■□□□□ 0.19
GABPB1-202ENST00000359031 AFG3L2Q9Y4W6 797 aa16.27■□□□□ 0.19
GABPB1-202ENST00000359031 NFASCO94856 1347 aa16.26■□□□□ 0.19
GABPB1-202ENST00000359031 BTNL10A8MVZ5 291 aa16.26■□□□□ 0.19
GABPB1-202ENST00000359031 BACH1O14867 736 aa16.26■□□□□ 0.19
GABPB1-202ENST00000359031 ATP9AO75110 1047 aa16.26■□□□□ 0.19
GABPB1-202ENST00000359031 TFRCP02786 760 aaKnown RBP16.26■□□□□ 0.19
GABPB1-202ENST00000359031 TCP1P17987 556 aaKnown RBP16.26■□□□□ 0.19
GABPB1-202ENST00000359031 IRF2BP2Q7Z5L9 587 aa16.26■□□□□ 0.19
GABPB1-202ENST00000359031 HVCN1Q96D96 273 aa16.26■□□□□ 0.19
GABPB1-202ENST00000359031 IKZF4Q9H2S9 585 aa16.26■□□□□ 0.19
GABPB1-202ENST00000359031 HYOU1Q9Y4L1 999 aa16.26■□□□□ 0.19
GABPB1-202ENST00000359031 MAPK13O15264 365 aa16.25■□□□□ 0.19
GABPB1-202ENST00000359031 EXOC3O60645 756 aa16.25■□□□□ 0.19
GABPB1-202ENST00000359031 ERLIN1O75477 346 aa16.25■□□□□ 0.19
GABPB1-202ENST00000359031 KRT13P13646 458 aa16.25■□□□□ 0.19
GABPB1-202ENST00000359031 FERP16591 822 aa16.25■□□□□ 0.19
GABPB1-202ENST00000359031 RFX1P22670 979 aa16.25■□□□□ 0.19
GABPB1-202ENST00000359031 NCKAP1LP55160 1127 aa16.25■□□□□ 0.19
GABPB1-202ENST00000359031 GTF2BQ00403 316 aa16.25■□□□□ 0.19
GABPB1-202ENST00000359031 MYL7Q01449 175 aa16.25■□□□□ 0.19
GABPB1-202ENST00000359031 BFSP1Q12934 665 aa16.25■□□□□ 0.19
GABPB1-202ENST00000359031 ZNF572Q7Z3I7 529 aaPredicted RBP16.25■□□□□ 0.19
GABPB1-202ENST00000359031 CAGE1Q8TC20 777 aa16.25■□□□□ 0.19
GABPB1-202ENST00000359031 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.25■□□□□ 0.19
GABPB1-202ENST00000359031 HOXC10Q9NYD6 342 aa16.25■□□□□ 0.19
GABPB1-202ENST00000359031 CYP39A1Q9NYL5 469 aa16.25■□□□□ 0.19
GABPB1-202ENST00000359031 PCDHA10Q9Y5I2 948 aa16.25■□□□□ 0.19
GABPB1-202ENST00000359031 A0A087X0T9 212 aa16.24■□□□□ 0.19
GABPB1-202ENST00000359031 SPDYE16A6NNV3 312 aaPredicted RBP16.24■□□□□ 0.19
GABPB1-202ENST00000359031 N4BP1O75113 896 aaKnown RBP16.24■□□□□ 0.19
GABPB1-202ENST00000359031 GFPT2O94808 682 aa16.24■□□□□ 0.19
GABPB1-202ENST00000359031 FAM228BP0C875 321 aa16.24■□□□□ 0.19
GABPB1-202ENST00000359031 KCNA2P16389 499 aa16.24■□□□□ 0.19
GABPB1-202ENST00000359031 STAT1P42224 750 aa16.24■□□□□ 0.19
GABPB1-202ENST00000359031 HIRAP54198 1017 aaPredicted RBP16.24■□□□□ 0.19
GABPB1-202ENST00000359031 ARID5AQ03989 594 aa16.24■□□□□ 0.19
GABPB1-202ENST00000359031 PTK2Q05397 1052 aa16.24■□□□□ 0.19
GABPB1-202ENST00000359031 ITIH3Q06033 890 aa16.24■□□□□ 0.19
GABPB1-202ENST00000359031 NAB2Q15742 525 aa16.24■□□□□ 0.19
GABPB1-202ENST00000359031 XKR9Q5GH70 373 aa16.24■□□□□ 0.19
GABPB1-202ENST00000359031 INTS8Q75QN2 995 aaKnown RBP16.24■□□□□ 0.19
GABPB1-202ENST00000359031 VPS36Q86VN1 386 aa16.24■□□□□ 0.19
GABPB1-202ENST00000359031 NOA1Q8NC60 698 aaKnown RBP16.24■□□□□ 0.19
GABPB1-202ENST00000359031 ATP6V0A1Q93050 837 aa16.24■□□□□ 0.19
GABPB1-202ENST00000359031 MMS19Q96T76 1030 aa16.24■□□□□ 0.19
GABPB1-202ENST00000359031 DOCK5Q9H7D0 1870 aa16.24■□□□□ 0.19
GABPB1-202ENST00000359031 MYH10P35580 1976 aa16.23■□□□□ 0.19
GABPB1-202ENST00000359031 SRGAP2O75044 1071 aa16.23■□□□□ 0.19
GABPB1-202ENST00000359031 SEC31AO94979 1220 aaKnown RBP16.23■□□□□ 0.19
GABPB1-202ENST00000359031 MCM3P25205 808 aa16.23■□□□□ 0.19
GABPB1-202ENST00000359031 GNPTABQ3T906 1256 aa16.23■□□□□ 0.19
GABPB1-202ENST00000359031 MAEAQ7L5Y9 396 aa16.23■□□□□ 0.19
GABPB1-202ENST00000359031 OTUD6AQ7L8S5 288 aa16.23■□□□□ 0.19
GABPB1-202ENST00000359031 ZNF571Q7Z3V5 609 aaPredicted RBP16.23■□□□□ 0.19
GABPB1-202ENST00000359031 HAUS6Q7Z4H7 955 aa16.23■□□□□ 0.19
GABPB1-202ENST00000359031 PNKPQ96T60 521 aa16.23■□□□□ 0.19
GABPB1-202ENST00000359031 INTS2Q9H0H0 1204 aaKnown RBP16.23■□□□□ 0.19
GABPB1-202ENST00000359031 A1CFQ9NQ94 594 aaKnown RBP16.23■□□□□ 0.19
GABPB1-202ENST00000359031 SALL4Q9UJQ4 1053 aa16.23■□□□□ 0.19
GABPB1-202ENST00000359031 FZD1Q9UP38 647 aa16.23■□□□□ 0.19
GABPB1-202ENST00000359031 EXOC7Q9UPT5 735 aa16.23■□□□□ 0.19
GABPB1-202ENST00000359031 POLR2AP24928 1970 aaKnown RBP16.23■□□□□ 0.19
GABPB1-202ENST00000359031 THSD7BQ9C0I4 1608 aa16.23■□□□□ 0.19
GABPB1-202ENST00000359031 TARSL2A2RTX5 802 aaKnown RBP16.23■□□□□ 0.19
GABPB1-202ENST00000359031 P4HA2O15460 535 aa16.23■□□□□ 0.19
GABPB1-202ENST00000359031 TBC1D8O95759 1140 aa16.23■□□□□ 0.19
GABPB1-202ENST00000359031 PSAPP07602 524 aa16.23■□□□□ 0.19
GABPB1-202ENST00000359031 RHOXF2BP0C7M4 288 aa16.23■□□□□ 0.19
GABPB1-202ENST00000359031 WDR93Q6P2C0 686 aa16.23■□□□□ 0.19
GABPB1-202ENST00000359031 USP50Q70EL3 339 aaPredicted RBP16.23■□□□□ 0.19
GABPB1-202ENST00000359031 CHST13Q8NET6 341 aa16.23■□□□□ 0.19
GABPB1-202ENST00000359031 VTI1AQ96AJ9 217 aa16.23■□□□□ 0.19
GABPB1-202ENST00000359031 CAPZA3Q96KX2 299 aa16.23■□□□□ 0.19
GABPB1-202ENST00000359031 OSBPL9Q96SU4 736 aa16.23■□□□□ 0.19
GABPB1-202ENST00000359031 RHOXF2Q9BQY4 288 aa16.23■□□□□ 0.19
GABPB1-202ENST00000359031 STK33Q9BYT3 514 aa16.23■□□□□ 0.19
GABPB1-202ENST00000359031 C17orf75Q9HAS0 396 aa16.23■□□□□ 0.19
GABPB1-202ENST00000359031 JPH1Q9HDC5 661 aaPredicted RBP16.23■□□□□ 0.19
GABPB1-202ENST00000359031 ADAMTS1Q9UHI8 967 aa16.23■□□□□ 0.19
GABPB1-202ENST00000359031 AJAP1Q9UKB5 411 aaPredicted RBP16.23■□□□□ 0.19
GABPB1-202ENST00000359031 NENFQ9UMX5 172 aa16.23■□□□□ 0.19
GABPB1-202ENST00000359031 PCDHGC5Q9Y5F6 944 aa16.23■□□□□ 0.19
GABPB1-202ENST00000359031 SNCAIPQ9Y6H5 919 aa16.23■□□□□ 0.19
GABPB1-202ENST00000359031 F8VZ95 297 aa16.22■□□□□ 0.19
GABPB1-202ENST00000359031 TRIM49P0CI25 452 aa16.22■□□□□ 0.19
GABPB1-202ENST00000359031 TRIM49CP0CI26 452 aa16.22■□□□□ 0.19
GABPB1-202ENST00000359031 SOX5P35711 763 aa16.22■□□□□ 0.19
GABPB1-202ENST00000359031 PEX3P56589 373 aa16.22■□□□□ 0.19
GABPB1-202ENST00000359031 PLS1Q14651 629 aa16.22■□□□□ 0.19
GABPB1-202ENST00000359031 IFI16Q16666 785 aaKnown RBP16.22■□□□□ 0.19
GABPB1-202ENST00000359031 LONRF2Q1L5Z9 754 aa16.22■□□□□ 0.19
GABPB1-202ENST00000359031 KIAA0753Q2KHM9 967 aa16.22■□□□□ 0.19
GABPB1-202ENST00000359031 CBWD6Q4V339 395 aa16.22■□□□□ 0.19
GABPB1-202ENST00000359031 CBWD3Q5JTY5 395 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms