RNA–Protein interactions for RNA: ENST00000358971.7

SEPSECS-201, Transcript of Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase, humanhuman

TSL 1 (best)

Gene SEPSECS, Length 3,344 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPSECS-201ENST00000358971 ERFP50548 548 aa12.25□□□□□ -0.45
SEPSECS-201ENST00000358971 DR1Q01658 176 aa12.25□□□□□ -0.45
SEPSECS-201ENST00000358971 DCTN2Q13561 401 aaKnown RBP12.25□□□□□ -0.45
SEPSECS-201ENST00000358971 ITGA7Q13683 1181 aa12.25□□□□□ -0.45
SEPSECS-201ENST00000358971 ACVR2BQ13705 512 aa12.25□□□□□ -0.45
SEPSECS-201ENST00000358971 GCKRQ14397 625 aa12.25□□□□□ -0.45
SEPSECS-201ENST00000358971 C16orf87Q6PH81 154 aa12.25□□□□□ -0.45
SEPSECS-201ENST00000358971 RFX8Q6ZV50 586 aa12.25□□□□□ -0.45
SEPSECS-201ENST00000358971 PEX26Q7Z412 305 aa12.25□□□□□ -0.45
SEPSECS-201ENST00000358971 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.25□□□□□ -0.45
SEPSECS-201ENST00000358971 BAP1Q92560 729 aa12.25□□□□□ -0.45
SEPSECS-201ENST00000358971 MCUR1Q96AQ8 359 aa12.25□□□□□ -0.45
SEPSECS-201ENST00000358971 ITGB1BP2Q9UKP3 347 aa12.25□□□□□ -0.45
SEPSECS-201ENST00000358971 PRPF3O43395 683 aaKnown RBP12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 DCTN3O75935 186 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 BRAFP15056 766 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 MCM7P33993 719 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 COPB2P35606 906 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 RGS2P41220 211 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 HDAC4P56524 1084 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 HGSNATQ68CP4 663 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 SCYL3Q8IZE3 742 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 DEPTORQ8TB45 409 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 SEC14L1Q92503 715 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 GLG1Q92896 1179 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 HSPBAP1Q96EW2 488 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 NKIRAS1Q9NYS0 192 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 ZNF148Q9UQR1 794 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 HEY1Q9Y5J3 304 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 WASF2Q9Y6W5 498 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 A0A087X0T9 212 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 PRAMEF22A3QJZ6 481 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 SPDYE16A6NNV3 312 aaPredicted RBP12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 FGGP02679 453 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 FAM228BP0C875 321 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 CLCN2P51788 898 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 PPP2R5CQ13362 524 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 TCIRG1Q13488 830 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 RBM26Q5T8P6 1007 aaKnown RBP12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 BTNL9Q6UXG8 535 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 GIMAP8Q8ND71 665 aaPredicted RBP12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 CDK5RAP3Q96JB5 506 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 ERP44Q9BS26 406 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 SYNCQ9H7C4 482 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 METTL14Q9HCE5 456 aaKnown RBP12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 PTTG2Q9NZH5 202 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 STX18Q9P2W9 335 aaKnown RBP12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 CNOT7Q9UIV1 285 aaKnown RBP12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 NEURL1BA8MQ27 555 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 DDX3XO00571 662 aaKnown RBP eCLIP12.24□□□□□ -0.452e-7■■□□□ 13.3
SEPSECS-201ENST00000358971 EYA4O95677 639 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 LDHAP00338 332 aaKnown RBP12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 SERPING1P05155 500 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 SMARCA1P28370 1054 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 POLR2FP61218 127 aaKnown RBP12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 DSG1Q02413 1049 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 DAB2IPQ5VWQ8 1189 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 VSTM1Q6UX27 236 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 SGMS1Q86VZ5 419 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 DZIP1Q86YF9 867 aaKnown RBP12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 VPS52Q8N1B4 723 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 CRACR2BQ8N4Y2 399 aaPredicted RBP12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 PRPF31Q8WWY3 499 aaKnown RBP12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 SRPK1Q96SB4 655 aaKnown RBP12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 ZKSCAN3Q9BRR0 538 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 GPCPD1Q9NPB8 672 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 ZDHHC18Q9NUE0 388 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 ZNF212Q9UDV6 495 aa12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 MTRF1LQ9UGC7 380 aaKnown RBP12.24□□□□□ -0.45
SEPSECS-201ENST00000358971 MYH4Q9Y623 1939 aa12.23□□□□□ -0.45
SEPSECS-201ENST00000358971 PRDM1O75626 825 aa12.23□□□□□ -0.45
SEPSECS-201ENST00000358971 CDK4P11802 303 aa12.23□□□□□ -0.45
SEPSECS-201ENST00000358971 PORP16435 677 aaPredicted RBP12.23□□□□□ -0.45
SEPSECS-201ENST00000358971 YARSP54577 528 aaKnown RBP12.23□□□□□ -0.45
SEPSECS-201ENST00000358971 SLC18A3Q16572 532 aa12.23□□□□□ -0.45
SEPSECS-201ENST00000358971 TAF1BQ53T94 588 aaPredicted RBP12.23□□□□□ -0.45
SEPSECS-201ENST00000358971 FNBP1Q96RU3 617 aa12.23□□□□□ -0.45
SEPSECS-201ENST00000358971 USP40Q9NVE5 1235 aa12.23□□□□□ -0.45
SEPSECS-201ENST00000358971 PPP1R9AQ9ULJ8 1098 aa12.23□□□□□ -0.45
SEPSECS-201ENST00000358971 TSC22D4Q9Y3Q8 395 aa12.23□□□□□ -0.45
SEPSECS-201ENST00000358971 FLT4P35916 1363 aa12.23□□□□□ -0.45
SEPSECS-201ENST00000358971 SMIM31A0A1B0GVY4 71 aa12.23□□□□□ -0.45
SEPSECS-201ENST00000358971 RBAK-RBAKDNI3L0D1 243 aa12.23□□□□□ -0.45
SEPSECS-201ENST00000358971 RGL2O15211 777 aa12.23□□□□□ -0.45
SEPSECS-201ENST00000358971 RNASEH1O60930 286 aaKnown RBP12.23□□□□□ -0.45
SEPSECS-201ENST00000358971 HALP42357 657 aa12.23□□□□□ -0.45
SEPSECS-201ENST00000358971 KLRC3Q07444 240 aa12.23□□□□□ -0.45
SEPSECS-201ENST00000358971 PDE4DQ08499 809 aa12.23□□□□□ -0.45
SEPSECS-201ENST00000358971 RAPGEF1Q13905 1077 aa12.23□□□□□ -0.45
SEPSECS-201ENST00000358971 B3GNT6Q6ZMB0 384 aa12.23□□□□□ -0.45
SEPSECS-201ENST00000358971 TXNDC2Q86VQ3 553 aa12.23□□□□□ -0.45
SEPSECS-201ENST00000358971 TREML1Q86YW5 311 aa12.23□□□□□ -0.45
SEPSECS-201ENST00000358971 ERMNQ8TAM6 284 aa12.23□□□□□ -0.45
SEPSECS-201ENST00000358971 APPBP2Q92624 585 aa12.23□□□□□ -0.45
SEPSECS-201ENST00000358971 MAGEB18Q96M61 343 aa12.23□□□□□ -0.45
SEPSECS-201ENST00000358971 NR2E1Q9Y466 385 aa12.23□□□□□ -0.45
SEPSECS-201ENST00000358971 MRC1P22897 1456 aa12.23□□□□□ -0.45
SEPSECS-201ENST00000358971 ATP9BO43861 1147 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 BAG2O95816 211 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 CCR3P51677 355 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms