RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 CPXCR1Q8N123 301 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 SLC30A5Q8TAD4 765 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 RBM46Q8TBY0 533 aaKnown RBP7.09□□□□□ -1.27
CSDE1-203ENST00000358528 ARHGEF26Q96DR7 871 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 IFT74Q96LB3 600 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 EIF2AK1Q9BQI3 630 aaKnown RBP7.09□□□□□ -1.27
CSDE1-203ENST00000358528 CCDC77Q9BR77 488 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 OSBPL7Q9BZF2 842 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 INTS2Q9H0H0 1204 aaKnown RBP7.09□□□□□ -1.27
CSDE1-203ENST00000358528 GANQ9H2C0 597 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 YY1AP1Q9H869 796 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 DBNDD1Q9H9R9 158 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 DAGLAQ9Y4D2 1042 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 KIF13AQ9H1H9 1805 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 WDR91A4D1P6 747 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 UBAP1LF5GYI3 381 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 IFNB1P01574 187 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 HARSP12081 509 aaKnown RBP7.08□□□□□ -1.28
CSDE1-203ENST00000358528 SETDB1Q15047 1291 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 TMED2Q15363 201 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 C2CD6Q53TS8 623 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 C6orf118Q5T5N4 469 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 AGBL2Q5U5Z8 902 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 SEPT14Q6ZU15 432 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 IRF2BP2Q7Z5L9 587 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 ACTRT1Q8TDG2 376 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 TBC1D22AQ8WUA7 517 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 SLC20A1Q8WUM9 679 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 RBM17Q96I25 401 aaKnown RBP7.08□□□□□ -1.28
CSDE1-203ENST00000358528 RIOX1Q9H6W3 641 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 ECT2Q9H8V3 914 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 NOD2Q9HC29 1040 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 ACP6Q9NPH0 428 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 KLHL14Q9P2G3 628 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 TJP1Q07157 1748 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 hCG_1984214I3L0E3 225 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 DIAPH2O60879 1101 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 ECEL1O95672 775 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 ATP2B4P23634 1241 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 FMO5P49326 533 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 ZNF131P52739 623 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 MTM1Q13496 603 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 BYSLQ13895 437 aaKnown RBP7.08□□□□□ -1.28
CSDE1-203ENST00000358528 SHROOM1Q2M3G4 852 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-203ENST00000358528 EDRF1Q3B7T1 1238 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 TMEM119Q4V9L6 283 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 EPC2Q52LR7 807 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 BARGINQ6ZT62 677 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 NT5DC3Q86UY8 548 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 ZNF713Q8N859 430 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-203ENST00000358528 CALR3Q96L12 384 aaKnown RBP7.08□□□□□ -1.28
CSDE1-203ENST00000358528 CDCA7Q9BWT1 371 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-203ENST00000358528 DUOX1Q9NRD9 1551 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 CHD4Q14839 1912 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 ABCB11O95342 1321 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 EMSYQ7Z589 1322 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 FOXN3O00409 490 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-203ENST00000358528 PDXKO00764 312 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 TOM1O60784 492 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 LCA5LO95447 670 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 BRAFP15056 766 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 COMTP21964 271 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 MARCKSL1P49006 195 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 ERFP50548 548 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 ZBTB16Q05516 673 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 ADCY2Q08462 1091 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 TRPM8Q7Z2W7 1104 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 ARMC9Q7Z3E5 817 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 TEKT1Q969V4 418 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 STAMBPL1Q96FJ0 436 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 PPP1R12CQ9BZL4 782 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 VPS37BQ9H9H4 285 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 ERVK-5Q9HDB9 667 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 SUCLA2Q9P2R7 463 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-203ENST00000358528 PARP2Q9UGN5 583 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 AJAP1Q9UKB5 411 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-203ENST00000358528 CASZ1Q86V15 1759 aa7.08□□□□□ -1.28
CSDE1-203ENST00000358528 ESYT2A0FGR8 921 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 CLDN3O15551 220 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 SPAG7O75391 227 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 TNFRSF8P28908 595 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 KYNUQ16719 465 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 SPRED3Q2MJR0 410 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 FBF1Q8TES7 1133 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 SCFD2Q8WU76 684 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 NSMCE1Q8WV22 266 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 KRT35Q92764 455 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 POP1Q99575 1024 aaKnown RBP7.07□□□□□ -1.28
CSDE1-203ENST00000358528 TRIM7Q9C029 511 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 PHRF1Q9P1Y6 1649 aaKnown RBP7.07□□□□□ -1.28
CSDE1-203ENST00000358528 GPR75-ASB3A0A0A6YYF3 556 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 CYP26A1O43174 497 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 PPP1R11O60927 126 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-203ENST00000358528 RPS6KA4O75676 772 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 UBOX5O94941 541 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 ATF2P15336 505 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 ATF7P17544 494 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-203ENST00000358528 CETN2P41208 172 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 PPP4CP60510 307 aa7.07□□□□□ -1.28
CSDE1-203ENST00000358528 NFIAQ12857 509 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms