RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 APBA1Q02410 837 aa15.62■□□□□ 0.09
NIPAL3-203ENST00000358028 RAPGEF1Q13905 1077 aa15.62■□□□□ 0.09
NIPAL3-203ENST00000358028 COG2Q14746 738 aa15.62■□□□□ 0.09
NIPAL3-203ENST00000358028 ATG4CQ96DT6 458 aa15.62■□□□□ 0.09
NIPAL3-203ENST00000358028 CAPZA3Q96KX2 299 aa15.62■□□□□ 0.09
NIPAL3-203ENST00000358028 NACC1Q96RE7 527 aa15.62■□□□□ 0.09
NIPAL3-203ENST00000358028 MXRA8Q9BRK3 442 aa15.62■□□□□ 0.09
NIPAL3-203ENST00000358028 METTL14Q9HCE5 456 aaKnown RBP15.62■□□□□ 0.09
NIPAL3-203ENST00000358028 POLD4Q9HCU8 107 aa15.62■□□□□ 0.09
NIPAL3-203ENST00000358028 RNF14Q9UBS8 474 aa15.62■□□□□ 0.09
NIPAL3-203ENST00000358028 MORF4L1Q9UBU8 362 aa15.62■□□□□ 0.09
NIPAL3-203ENST00000358028 AKAP3O75969 853 aa15.61■□□□□ 0.09
NIPAL3-203ENST00000358028 EPB41P11171 864 aaKnown RBP15.61■□□□□ 0.09
NIPAL3-203ENST00000358028 DSG3P32926 999 aa15.61■□□□□ 0.09
NIPAL3-203ENST00000358028 ASIC2Q16515 512 aa15.61■□□□□ 0.09
NIPAL3-203ENST00000358028 B3GNT9Q6UX72 402 aa15.61■□□□□ 0.09
NIPAL3-203ENST00000358028 LBX2Q6XYB7 198 aa15.61■□□□□ 0.09
NIPAL3-203ENST00000358028 CREG2Q8IUH2 290 aa15.61■□□□□ 0.09
NIPAL3-203ENST00000358028 MYCT1Q8N699 235 aa15.61■□□□□ 0.09
NIPAL3-203ENST00000358028 ZFP91Q96JP5 570 aaPredicted RBP15.61■□□□□ 0.09
NIPAL3-203ENST00000358028 AGBL1Q96MI9 1066 aa15.61■□□□□ 0.09
NIPAL3-203ENST00000358028 NOX5Q96PH1 765 aa15.61■□□□□ 0.09
NIPAL3-203ENST00000358028 PLCB1Q9NQ66 1216 aa15.61■□□□□ 0.09
NIPAL3-203ENST00000358028 AIPL1Q9NZN9 384 aa15.61■□□□□ 0.09
NIPAL3-203ENST00000358028 BTBD7Q9P203 1132 aa15.61■□□□□ 0.09
NIPAL3-203ENST00000358028 ZNF536O15090 1300 aa15.61■□□□□ 0.09
NIPAL3-203ENST00000358028 UBE4BO95155 1302 aa15.61■□□□□ 0.09
NIPAL3-203ENST00000358028 RPTORQ8N122 1335 aa15.61■□□□□ 0.09
NIPAL3-203ENST00000358028 ZMYM2Q9UBW7 1377 aa15.61■□□□□ 0.09
NIPAL3-203ENST00000358028 SFI1A8K8P3 1242 aa15.6■□□□□ 0.09
NIPAL3-203ENST00000358028 XRCC5P13010 732 aaKnown RBP15.6■□□□□ 0.09
NIPAL3-203ENST00000358028 PSMC4P43686 418 aa15.6■□□□□ 0.09
NIPAL3-203ENST00000358028 ERVK-9P63128 1117 aa15.6■□□□□ 0.09
NIPAL3-203ENST00000358028 Q3C1V9 767 aa15.6■□□□□ 0.09
NIPAL3-203ENST00000358028 MUM1L1Q5H9M0 696 aa15.6■□□□□ 0.09
NIPAL3-203ENST00000358028 DPY19L2P1Q6NXN4 242 aa15.6■□□□□ 0.09
NIPAL3-203ENST00000358028 GTF3C2Q8WUA4 911 aaPredicted RBP15.6■□□□□ 0.09
NIPAL3-203ENST00000358028 RIT2Q99578 217 aa15.6■□□□□ 0.09
NIPAL3-203ENST00000358028 PARVGQ9HBI0 331 aa15.6■□□□□ 0.09
NIPAL3-203ENST00000358028 SEL1LQ9UBV2 794 aa15.6■□□□□ 0.09
NIPAL3-203ENST00000358028 PPP1R9AQ9ULJ8 1098 aa15.6■□□□□ 0.09
NIPAL3-203ENST00000358028 TRIM17Q9Y577 477 aa15.6■□□□□ 0.09
NIPAL3-203ENST00000358028 ZNFX1Q9P2E3 1918 aaKnown RBP15.6■□□□□ 0.09
NIPAL3-203ENST00000358028 ERICH4A6NGS2 130 aa15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 PDE2AO00408 941 aaPredicted RBP15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 ZBTB39O15060 712 aa15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 CLIC2O15247 247 aa15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 NMT1P30419 496 aaKnown RBP15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 KIF22Q14807 665 aa15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 NFIL3Q16649 462 aa15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 DCAF17Q5H9S7 520 aaPredicted RBP15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 CCNI2Q6ZMN8 369 aaPredicted RBP15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 GPRC5AQ8NFJ5 357 aa15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 NEK9Q8TD19 979 aa15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 CLEC4DQ8WXI8 215 aa15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 OSBPL9Q96SU4 736 aa15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 SUGCTQ9HAC7 445 aa15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 HOXC10Q9NYD6 342 aa15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 KCND2Q9NZV8 630 aa15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 WRAP73Q9P2S5 460 aaPredicted RBP15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 MYPNQ86TC9 1320 aa15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 LRRIQ3A6PVS8 624 aaPredicted RBP15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 IPO5O00410 1097 aaKnown RBP15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 ZNF185O15231 689 aa15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 TGFB1I1O43294 461 aa15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 ACTN1P12814 892 aa15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 SLC9A1P19634 815 aa15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 CASP4P49662 377 aa15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 ZNF131P52739 623 aa15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 GHRHRQ02643 423 aa15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 KCNA1Q09470 495 aa15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 KLHL30Q0D2K2 578 aa15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 MCF2L2Q86YR7 1114 aa15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 FAM133AQ8N9E0 248 aa15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 PRPF38AQ8NAV1 312 aaKnown RBP15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 COG1Q8WTW3 980 aa15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 PORCNQ9H237 461 aa15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 EFCC1Q9HA90 598 aa15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 COL20A1Q9P218 1284 aa15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 VPS18Q9P253 973 aa15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 ODF2LQ9ULJ1 636 aa15.59■□□□□ 0.09
NIPAL3-203ENST00000358028 NFIBO00712 420 aa15.58■□□□□ 0.08
NIPAL3-203ENST00000358028 PON1P27169 355 aa15.58■□□□□ 0.08
NIPAL3-203ENST00000358028 ANXA13P27216 316 aa15.58■□□□□ 0.08
NIPAL3-203ENST00000358028 PAFAH1B1P43034 410 aa15.58■□□□□ 0.08
NIPAL3-203ENST00000358028 MLLT1Q03111 559 aaPredicted RBP15.58■□□□□ 0.08
NIPAL3-203ENST00000358028 SLC18A3Q16572 532 aa15.58■□□□□ 0.08
NIPAL3-203ENST00000358028 EXOC3L4Q17RC7 722 aa15.58■□□□□ 0.08
NIPAL3-203ENST00000358028 GLE1Q53GS7 698 aaKnown RBP15.58■□□□□ 0.08
NIPAL3-203ENST00000358028 C10orf76Q5T2E6 689 aa15.58■□□□□ 0.08
NIPAL3-203ENST00000358028 KLHDC7AQ5VTJ3 777 aa15.58■□□□□ 0.08
NIPAL3-203ENST00000358028 STXBP4Q6ZWJ1 553 aa15.58■□□□□ 0.08
NIPAL3-203ENST00000358028 NIPA1Q7RTP0 329 aa15.58■□□□□ 0.08
NIPAL3-203ENST00000358028 DRC1Q96MC2 740 aa15.58■□□□□ 0.08
NIPAL3-203ENST00000358028 FIZ1Q96SL8 496 aa15.58■□□□□ 0.08
NIPAL3-203ENST00000358028 LXNQ9BS40 222 aa15.58■□□□□ 0.08
NIPAL3-203ENST00000358028 SALL4Q9UJQ4 1053 aa15.58■□□□□ 0.08
NIPAL3-203ENST00000358028 HPCAL4Q9UM19 191 aa15.58■□□□□ 0.08
NIPAL3-203ENST00000358028 ADAMTS5Q9UNA0 930 aa15.58■□□□□ 0.08
NIPAL3-203ENST00000358028 ATP8B3O60423 1300 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms