RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 NPTX2P47972 431 aa16.44■□□□□ 0.22
CCNE1-202ENST00000357943 RBL2Q08999 1139 aa16.44■□□□□ 0.22
CCNE1-202ENST00000357943 ODR4Q5SWX8 454 aa16.44■□□□□ 0.22
CCNE1-202ENST00000357943 TRAF7Q6Q0C0 670 aa16.44■□□□□ 0.22
CCNE1-202ENST00000357943 UNC13DQ70J99 1090 aa16.44■□□□□ 0.22
CCNE1-202ENST00000357943 NLRP7Q8WX94 980 aa16.44■□□□□ 0.22
CCNE1-202ENST00000357943 HPS3Q969F9 1004 aa16.44■□□□□ 0.22
CCNE1-202ENST00000357943 IFT74Q96LB3 600 aa16.44■□□□□ 0.22
CCNE1-202ENST00000357943 FIZ1Q96SL8 496 aa16.44■□□□□ 0.22
CCNE1-202ENST00000357943 OSMRQ99650 979 aa16.44■□□□□ 0.22
CCNE1-202ENST00000357943 FDXACB1Q9BRP7 624 aaPredicted RBP16.44■□□□□ 0.22
CCNE1-202ENST00000357943 PPP1R12CQ9BZL4 782 aa16.44■□□□□ 0.22
CCNE1-202ENST00000357943 C17orf75Q9HAS0 396 aa16.44■□□□□ 0.22
CCNE1-202ENST00000357943 IFT122Q9HBG6 1241 aa16.44■□□□□ 0.22
CCNE1-202ENST00000357943 LARSQ9P2J5 1176 aaKnown RBP16.44■□□□□ 0.22
CCNE1-202ENST00000357943 HOOK1Q9UJC3 728 aaKnown RBP16.44■□□□□ 0.22
CCNE1-202ENST00000357943 ADGRA3Q8IWK6 1321 aa16.44■□□□□ 0.22
CCNE1-202ENST00000357943 LRRIQ4A6NIV6 560 aa16.43■□□□□ 0.22
CCNE1-202ENST00000357943 PITPNM1O00562 1244 aa16.43■□□□□ 0.22
CCNE1-202ENST00000357943 ASAP2O43150 1006 aa16.43■□□□□ 0.22
CCNE1-202ENST00000357943 CAND2O75155 1236 aa16.43■□□□□ 0.22
CCNE1-202ENST00000357943 RPLP2P05387 115 aaKnown RBP16.43■□□□□ 0.22
CCNE1-202ENST00000357943 ITGB8P26012 769 aa16.43■□□□□ 0.22
CCNE1-202ENST00000357943 NAMPTP43490 491 aa16.43■□□□□ 0.22
CCNE1-202ENST00000357943 COASYQ13057 564 aa16.43■□□□□ 0.22
CCNE1-202ENST00000357943 DMP1Q13316 513 aaPredicted RBP16.43■□□□□ 0.22
CCNE1-202ENST00000357943 BFSP2Q13515 415 aa16.43■□□□□ 0.22
CCNE1-202ENST00000357943 KLHL40Q2TBA0 621 aa16.43■□□□□ 0.22
CCNE1-202ENST00000357943 HERC4Q5GLZ8 1057 aaPredicted RBP16.43■□□□□ 0.22
CCNE1-202ENST00000357943 SFR1Q86XK3 245 aa16.43■□□□□ 0.22
CCNE1-202ENST00000357943 CCDC65Q8IXS2 484 aa16.43■□□□□ 0.22
CCNE1-202ENST00000357943 C7orf61Q8IZ16 206 aa16.43■□□□□ 0.22
CCNE1-202ENST00000357943 CCDC155Q8N6L0 562 aa16.43■□□□□ 0.22
CCNE1-202ENST00000357943 TMEM40Q8WWA1 233 aa16.43■□□□□ 0.22
CCNE1-202ENST00000357943 CELF4Q9BZC1 486 aaKnown RBP16.43■□□□□ 0.22
CCNE1-202ENST00000357943 OSBPL7Q9BZF2 842 aa16.43■□□□□ 0.22
CCNE1-202ENST00000357943 NUP62CLQ9H1M0 184 aa16.43■□□□□ 0.22
CCNE1-202ENST00000357943 PCDHA5Q9Y5H7 936 aa16.43■□□□□ 0.22
CCNE1-202ENST00000357943 PVALEFA0A1B0GWK0 134 aa16.42■□□□□ 0.22
CCNE1-202ENST00000357943 CCDC169A6NNP5 214 aa16.42■□□□□ 0.22
CCNE1-202ENST00000357943 M0QZ92 97 aa16.42■□□□□ 0.22
CCNE1-202ENST00000357943 TRAK2O60296 914 aa16.42■□□□□ 0.22
CCNE1-202ENST00000357943 CSDE1O75534 798 aaKnown RBP16.42■□□□□ 0.22
CCNE1-202ENST00000357943 RPN1P04843 607 aaKnown RBP16.42■□□□□ 0.22
CCNE1-202ENST00000357943 CYP2C18P33260 490 aa16.42■□□□□ 0.22
CCNE1-202ENST00000357943 CDC42EP1Q00587 391 aa16.42■□□□□ 0.22
CCNE1-202ENST00000357943 KMT5BQ4FZB7 885 aa16.42■□□□□ 0.22
CCNE1-202ENST00000357943 FAM26DQ5JW98 314 aa16.42■□□□□ 0.22
CCNE1-202ENST00000357943 LRRC8DQ7L1W4 858 aa16.42■□□□□ 0.22
CCNE1-202ENST00000357943 ZNF410Q86VK4 478 aa16.42■□□□□ 0.22
CCNE1-202ENST00000357943 SPATA20Q8TB22 786 aa16.42■□□□□ 0.22
CCNE1-202ENST00000357943 SCLT1Q96NL6 688 aa16.42■□□□□ 0.22
CCNE1-202ENST00000357943 KMT5AQ9NQR1 393 aa16.42■□□□□ 0.22
CCNE1-202ENST00000357943 TBC1D7Q9P0N9 293 aa16.42■□□□□ 0.22
CCNE1-202ENST00000357943 TMEM63CQ9P1W3 806 aa16.42■□□□□ 0.22
CCNE1-202ENST00000357943 TRPV2Q9Y5S1 764 aa16.42■□□□□ 0.22
CCNE1-202ENST00000357943 ALPK3Q96L96 1907 aa16.42■□□□□ 0.22
CCNE1-202ENST00000357943 KIAA0355O15063 1070 aa16.41■□□□□ 0.22
CCNE1-202ENST00000357943 SLC16A4O15374 487 aa16.41■□□□□ 0.22
CCNE1-202ENST00000357943 EVI5O60447 810 aa16.41■□□□□ 0.22
CCNE1-202ENST00000357943 SELPP16109 830 aa16.41■□□□□ 0.22
CCNE1-202ENST00000357943 CRYBB1P53674 252 aaPredicted RBP16.41■□□□□ 0.22
CCNE1-202ENST00000357943 CCL23P55773 120 aa16.41■□□□□ 0.22
CCNE1-202ENST00000357943 EHHADHQ08426 723 aa16.41■□□□□ 0.22
CCNE1-202ENST00000357943 TFDP1Q14186 410 aa16.41■□□□□ 0.22
CCNE1-202ENST00000357943 MBTPS1Q14703 1052 aa16.41■□□□□ 0.22
CCNE1-202ENST00000357943 PPP2R5AQ15172 486 aa16.41■□□□□ 0.22
CCNE1-202ENST00000357943 FAM178BQ8IXR5 827 aa16.41■□□□□ 0.22
CCNE1-202ENST00000357943 SPIRE2Q8WWL2 714 aa16.41■□□□□ 0.22
CCNE1-202ENST00000357943 DPF3Q92784 378 aa16.41■□□□□ 0.22
CCNE1-202ENST00000357943 SCLYQ96I15 445 aa16.41■□□□□ 0.22
CCNE1-202ENST00000357943 NTPCRQ9BSD7 190 aaKnown RBP16.41■□□□□ 0.22
CCNE1-202ENST00000357943 FGFBP2Q9BYJ0 223 aa16.41■□□□□ 0.22
CCNE1-202ENST00000357943 WNT8AQ9H1J5 351 aa16.41■□□□□ 0.22
CCNE1-202ENST00000357943 MINDY3Q9H8M7 445 aa16.41■□□□□ 0.22
CCNE1-202ENST00000357943 IQCF3P0C7M6 154 aa16.41■□□□□ 0.22
CCNE1-202ENST00000357943 GAP43P17677 238 aa16.41■□□□□ 0.22
CCNE1-202ENST00000357943 NMT1P30419 496 aaKnown RBP16.41■□□□□ 0.22
CCNE1-202ENST00000357943 SARSP49591 514 aaKnown RBP16.41■□□□□ 0.22
CCNE1-202ENST00000357943 NCKAP1LP55160 1127 aa16.41■□□□□ 0.22
CCNE1-202ENST00000357943 PTENP60484 403 aa16.41■□□□□ 0.22
CCNE1-202ENST00000357943 CDCA2Q69YH5 1023 aaPredicted RBP16.41■□□□□ 0.22
CCNE1-202ENST00000357943 CAVIN1Q6NZI2 390 aaKnown RBP16.41■□□□□ 0.22
CCNE1-202ENST00000357943 DEPTORQ8TB45 409 aa16.41■□□□□ 0.22
CCNE1-202ENST00000357943 SMARCE1Q969G3 411 aa16.41■□□□□ 0.22
CCNE1-202ENST00000357943 MRPL44Q9H9J2 332 aaKnown RBP16.41■□□□□ 0.22
CCNE1-202ENST00000357943 OLFML3Q9NRN5 406 aa16.41■□□□□ 0.22
CCNE1-202ENST00000357943 ARHGAP28Q9P2N2 729 aa16.41■□□□□ 0.22
CCNE1-202ENST00000357943 SEL1LQ9UBV2 794 aa16.41■□□□□ 0.22
CCNE1-202ENST00000357943 LAMA2P24043 3122 aaKnown RBP16.4■□□□□ 0.22
CCNE1-202ENST00000357943 CAPN15O75808 1086 aa16.4■□□□□ 0.22
CCNE1-202ENST00000357943 TIMP1P01033 207 aa16.4■□□□□ 0.22
CCNE1-202ENST00000357943 DARSP14868 501 aaKnown RBP16.4■□□□□ 0.22
CCNE1-202ENST00000357943 RAG1P15918 1043 aa16.4■□□□□ 0.22
CCNE1-202ENST00000357943 EIF4BP23588 611 aaKnown RBP16.4■□□□□ 0.22
CCNE1-202ENST00000357943 PHKA2P46019 1235 aa16.4■□□□□ 0.22
CCNE1-202ENST00000357943 CASP5P51878 434 aa16.4■□□□□ 0.22
CCNE1-202ENST00000357943 SMTNP53814 917 aa16.4■□□□□ 0.22
CCNE1-202ENST00000357943 POU5F1BQ06416 359 aa16.4■□□□□ 0.22
CCNE1-202ENST00000357943 GPNMBQ14956 572 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms