RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 HIST1H2AHQ96KK5 128 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 HIST1H2AJQ99878 128 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 H2AFJQ9BTM1 129 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 COPS7BQ9H9Q2 264 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-203ENST00000357654 LRCH1Q9Y2L9 728 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 IPPQ9Y573 584 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 ABCA10Q8WWZ4 1543 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 RASSF9O75901 435 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 ENDOD1O94919 500 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 FGFR1P11362 822 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 ATP12AP54707 1039 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 TP53BP2Q13625 1128 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 SGO2Q562F6 1265 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 SCARA3Q6AZY7 606 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 C16orf87Q6PH81 154 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 ARHGAP9Q9BRR9 750 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 EPN3Q9H201 632 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 BCL2L12Q9HB09 334 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 LARSQ9P2J5 1176 aaKnown RBP6.17□□□□□ -1.42
BRCA1-203ENST00000357654 PACSIN2Q9UNF0 486 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-203ENST00000357654 GAPVD1Q14C86 1478 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 ARL3P36405 182 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 NRG3P56975 720 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 AP3B2Q13367 1082 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 UBE2SQ16763 222 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 ARHGAP17Q68EM7 881 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.17□□□□□ -1.42
BRCA1-203ENST00000357654 R3HCC1LQ7Z5L2 792 aaKnown RBP6.17□□□□□ -1.42
BRCA1-203ENST00000357654 DGKHQ86XP1 1220 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 TRIM42Q8IWZ5 723 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 ATL2Q8NHH9 583 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 SPIRE2Q8WWL2 714 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 ESYT1Q9BSJ8 1104 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 TRIM4Q9C037 500 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 ASAP1Q9ULH1 1129 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 PKP3Q9Y446 797 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 COL4A3BPQ9Y5P4 624 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 RNASEH1O60930 286 aaKnown RBP6.17□□□□□ -1.42
BRCA1-203ENST00000357654 GCP02774 474 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 FCER1AP12319 257 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 ITGAXP20702 1163 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 CHRNA3P32297 505 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 FEN1P39748 380 aaKnown RBP6.17□□□□□ -1.42
BRCA1-203ENST00000357654 COPB1P53618 953 aaKnown RBP6.17□□□□□ -1.42
BRCA1-203ENST00000357654 LLGL2Q6P1M3 1020 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 FAM47EQ6ZV65 393 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 SRRM1Q8IYB3 904 aaKnown RBP6.17□□□□□ -1.42
BRCA1-203ENST00000357654 NUP93Q8N1F7 819 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 UXS1Q8NBZ7 420 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 CSGALNACT1Q8TDX6 532 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 PRRG4Q9BZD6 226 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 M0QYV0 167 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 PSMD12O00232 456 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-203ENST00000357654 GMFGO60234 142 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 RPSAP08865 295 aaKnown RBP6.17□□□□□ -1.42
BRCA1-203ENST00000357654 CYP19A1P11511 503 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-203ENST00000357654 HMOX2P30519 316 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 POSTNQ15063 836 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 SNAP47Q5SQN1 464 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 SYDE2Q5VT97 1194 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 ZSCAN10Q96SZ4 725 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-203ENST00000357654 UPF3AQ9H1J1 476 aaKnown RBP6.17□□□□□ -1.42
BRCA1-203ENST00000357654 ATP6V0A4Q9HBG4 840 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 ABI2Q9NYB9 513 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-203ENST00000357654 ATP9BO43861 1147 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 PRMT3O60678 531 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 GPC3P51654 580 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 TRIM71Q2Q1W2 868 aaKnown RBP6.16□□□□□ -1.42
BRCA1-203ENST00000357654 SNRNP48Q6IEG0 339 aaKnown RBP6.16□□□□□ -1.42
BRCA1-203ENST00000357654 ERICH1Q86X53 443 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 CERS3Q8IU89 383 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 UNC45BQ8IWX7 931 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 SCFD1Q8WVM8 642 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 RUBCNQ92622 972 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 DBNDD2Q9BQY9 259 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 ABCG4Q9H172 646 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 CAAP1Q9H8G2 361 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 SPASTQ9UBP0 616 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 ATP8A1Q9Y2Q0 1164 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 PCDHGA3Q9Y5H0 932 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 SNX5Q9Y5X3 404 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 MROH5Q6ZUA9 1318 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 KIF21AQ7Z4S6 1674 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 TLR2O60603 784 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 CCDC130P13994 396 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 SRSF11Q05519 484 aaKnown RBP6.16□□□□□ -1.42
BRCA1-203ENST00000357654 RCN1Q15293 331 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 KRT24Q2M2I5 525 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 HDDC2Q7Z4H3 204 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 CYP4X1Q8N118 509 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-203ENST00000357654 VPS37AQ8NEZ2 397 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 IDI2Q9BXS1 227 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 DDX28Q9NUL7 540 aaKnown RBP6.16□□□□□ -1.42
BRCA1-203ENST00000357654 ADA2Q9NZK5 511 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 PASKQ96RG2 1323 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 E2F8A0AVK6 867 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 ASAP2O43150 1006 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 ALOX15P16050 662 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-203ENST00000357654 FLT3P36888 993 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms